RNA–Protein interactions for RNA: ENST00000531556.1

AP004247.1-201, humanhuman

BASIC

Gene AP004247.1, Length 1,289 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004247.1-201ENST00000531556 TRAPPC12Q8WVT3 735 aa4.33□□□□□ -1.72
AP004247.1-201ENST00000531556 CCT6BQ92526 530 aa4.33□□□□□ -1.72
AP004247.1-201ENST00000531556 MCRS1Q96EZ8 462 aa4.33□□□□□ -1.72
AP004247.1-201ENST00000531556 CCDC17Q96LX7 622 aa4.33□□□□□ -1.72
AP004247.1-201ENST00000531556 HS6ST2Q96MM7 605 aa4.33□□□□□ -1.72
AP004247.1-201ENST00000531556 FYTTD1Q96QD9 318 aaKnown RBP4.33□□□□□ -1.72
AP004247.1-201ENST00000531556 HERPUD2Q9BSE4 406 aa4.33□□□□□ -1.72
AP004247.1-201ENST00000531556 SORBS1Q9BX66 1292 aaKnown RBP4.33□□□□□ -1.72
AP004247.1-201ENST00000531556 TMEM120AQ9BXJ8 343 aa4.33□□□□□ -1.72
AP004247.1-201ENST00000531556 MLXIPQ9HAP2 919 aa4.33□□□□□ -1.72
AP004247.1-201ENST00000531556 KCNK9Q9NPC2 374 aa4.33□□□□□ -1.72
AP004247.1-201ENST00000531556 FBXO28Q9NVF7 368 aa4.33□□□□□ -1.72
AP004247.1-201ENST00000531556 NFU1Q9UMS0 254 aa4.33□□□□□ -1.72
AP004247.1-201ENST00000531556 VPS4AQ9UN37 437 aa4.33□□□□□ -1.72
AP004247.1-201ENST00000531556 UBE2J1Q9Y385 318 aaPredicted RBP4.33□□□□□ -1.72
AP004247.1-201ENST00000531556 RIPOR2Q9Y4F9 1068 aa4.33□□□□□ -1.72
AP004247.1-201ENST00000531556 PCDHB7Q9Y5E2 793 aa4.33□□□□□ -1.72
AP004247.1-201ENST00000531556 MORC2Q9Y6X9 1032 aaPredicted RBP4.33□□□□□ -1.72
AP004247.1-201ENST00000531556 LOC105369274A0A096LPK9 316 aa4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 LOC102723532A0A0G2JNH3 316 aa4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 FAM90A18PA6NE21 464 aa4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 FAM90A16PA6NEW6 464 aa4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 FAM90A9PA6NNJ1 464 aa4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 FAM90A5PA8MXJ8 464 aa4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 CLIC1O00299 241 aa4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 FYB1O15117 783 aa4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 PIP5K1CO60331 668 aa4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 GCATO75600 419 aa4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 FAM90A15PP0C7V4 464 aa4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 FAM90A14PP0C7W9 464 aa4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 DUSP1P28562 367 aa4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 JAK3P52333 1124 aa4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 AP2B1P63010 937 aa4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 TFF2Q03403 129 aa4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 DHX8Q14562 1220 aaKnown RBP4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 MFSD13AQ14CX5 517 aa4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 LARS2Q15031 903 aaKnown RBP4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 BTBD16Q32M84 506 aa4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 JMJD6Q6NYC1 403 aaPredicted RBP4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 TMEM65Q6PI78 240 aa4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 C16orf89Q6UX73 402 aa4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 CHSY1Q86X52 802 aa4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 SLC44A2Q8IWA5 706 aaPredicted RBP4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 CCDC117Q8IWD4 279 aaPredicted RBP4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 OR4N4Q8N0Y3 316 aa4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 SPATA5Q8NB90 893 aa4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 OR52L2PQ8NGH6 319 aa4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 SCAMP5Q8TAC9 235 aa4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 OTUD7AQ8TE49 926 aaPredicted RBP4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 GLMPQ8WWB7 406 aa4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 RITA1Q96K30 269 aa4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 TMEM79Q9BSE2 394 aa4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 PAGR1Q9BTK6 254 aa4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 MYLK2Q9H1R3 596 aa4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 PABPC3Q9H361 631 aaKnown RBP4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 PRDM8Q9NQV8 689 aa4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 ABHD10Q9NUJ1 306 aa4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 SEMA5BQ9P283 1151 aa4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 CNTN6Q9UQ52 1028 aa4.32□□□□□ -1.72
AP004247.1-201ENST00000531556 SPATA31A1Q5TZJ5 1347 aa4.31□□□□□ -1.72
AP004247.1-201ENST00000531556 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.31□□□□□ -1.72
AP004247.1-201ENST00000531556 SERINC4A6NH21 518 aa4.31□□□□□ -1.72
AP004247.1-201ENST00000531556 KIF28PB7ZC32 967 aa4.31□□□□□ -1.72
AP004247.1-201ENST00000531556 TISP43B9A030 160 aa4.31□□□□□ -1.72
AP004247.1-201ENST00000531556 UBE2Q2LH0YL09 131 aa4.31□□□□□ -1.72
AP004247.1-201ENST00000531556 IPO5O00410 1097 aaKnown RBP4.31□□□□□ -1.72
AP004247.1-201ENST00000531556 PPP6R2O75170 966 aa4.31□□□□□ -1.72
AP004247.1-201ENST00000531556 LATS1O95835 1130 aa4.31□□□□□ -1.72
AP004247.1-201ENST00000531556 CHRM5P08912 532 aaPredicted RBP4.31□□□□□ -1.72
AP004247.1-201ENST00000531556 MATN1P21941 496 aa4.31□□□□□ -1.72
AP004247.1-201ENST00000531556 THBS4P35443 961 aa4.31□□□□□ -1.72
AP004247.1-201ENST00000531556 WDR5P61964 334 aaKnown RBP4.31□□□□□ -1.72
AP004247.1-201ENST00000531556 PRKG1Q13976 671 aa4.31□□□□□ -1.72
AP004247.1-201ENST00000531556 KCNB1Q14721 858 aa4.31□□□□□ -1.72
AP004247.1-201ENST00000531556 POSTNQ15063 836 aa4.31□□□□□ -1.72
AP004247.1-201ENST00000531556 TMEM119Q4V9L6 283 aa4.31□□□□□ -1.72
AP004247.1-201ENST00000531556 INO80DQ53TQ3 878 aaPredicted RBP4.31□□□□□ -1.72
AP004247.1-201ENST00000531556 PRAMEF17Q5VTA0 474 aa4.31□□□□□ -1.72
AP004247.1-201ENST00000531556 VSTM1Q6UX27 236 aa4.31□□□□□ -1.72
AP004247.1-201ENST00000531556 ZNF782Q6ZMW2 699 aaPredicted RBP4.31□□□□□ -1.72
AP004247.1-201ENST00000531556 YTHDF3Q7Z739 585 aaKnown RBP4.31□□□□□ -1.72
AP004247.1-201ENST00000531556 EXOC8Q8IYI6 725 aa4.31□□□□□ -1.72
AP004247.1-201ENST00000531556 ANKRD42Q8N9B4 389 aa4.31□□□□□ -1.72
AP004247.1-201ENST00000531556 PNLDC1Q8NA58 520 aaKnown RBP4.31□□□□□ -1.72
AP004247.1-201ENST00000531556 NPIPB3Q92617 1050 aa4.31□□□□□ -1.72
AP004247.1-201ENST00000531556 FAR2Q96K12 515 aa4.31□□□□□ -1.72
AP004247.1-201ENST00000531556 DDX23Q9BUQ8 820 aaKnown RBP4.31□□□□□ -1.72
AP004247.1-201ENST00000531556 MECRQ9BV79 373 aa4.31□□□□□ -1.72
AP004247.1-201ENST00000531556 VPS16Q9H269 839 aa4.31□□□□□ -1.72
AP004247.1-201ENST00000531556 CDCP1Q9H5V8 836 aa4.31□□□□□ -1.72
AP004247.1-201ENST00000531556 DAPP1Q9UN19 280 aa4.31□□□□□ -1.72
AP004247.1-201ENST00000531556 ZBTB1Q9Y2K1 713 aa4.31□□□□□ -1.72
AP004247.1-201ENST00000531556 PLEKHD1A6NEE1 506 aa4.3□□□□□ -1.72
AP004247.1-201ENST00000531556 M0QYT0 321 aa4.3□□□□□ -1.72
AP004247.1-201ENST00000531556 NKX2-8O15522 239 aa4.3□□□□□ -1.72
AP004247.1-201ENST00000531556 LARGE1O95461 756 aa4.3□□□□□ -1.72
AP004247.1-201ENST00000531556 MMP13P45452 471 aa4.3□□□□□ -1.72
AP004247.1-201ENST00000531556 SF3A3Q12874 501 aaKnown RBP eCLIP4.3□□□□□ -1.72
AP004247.1-201ENST00000531556 CBFBQ13951 182 aa4.3□□□□□ -1.72
AP004247.1-201ENST00000531556 TIGD6Q17RP2 521 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms