RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 RBP5P82980 135 aa8.66□□□□□ -1.02
CD44-232ENST00000531118 GRIN1Q05586 938 aa8.66□□□□□ -1.02
CD44-232ENST00000531118 EIF4HQ15056 248 aaKnown RBP8.66□□□□□ -1.02
CD44-232ENST00000531118 ME3Q16798 604 aa8.66□□□□□ -1.02
CD44-232ENST00000531118 KIAA0895LQ68EN5 471 aa8.66□□□□□ -1.02
CD44-232ENST00000531118 SERPINA13PQ6UXR4 307 aa8.66□□□□□ -1.02
CD44-232ENST00000531118 Q6ZNB5 142 aa8.66□□□□□ -1.02
CD44-232ENST00000531118 HS2ST1Q7LGA3 356 aa8.66□□□□□ -1.02
CD44-232ENST00000531118 KANSL1Q7Z3B3 1105 aa8.66□□□□□ -1.02
CD44-232ENST00000531118 FAM35AQ86V20 835 aa8.66□□□□□ -1.02
CD44-232ENST00000531118 LSMEM2Q8N112 164 aa8.66□□□□□ -1.02
CD44-232ENST00000531118 NUP93Q8N1F7 819 aa8.66□□□□□ -1.02
CD44-232ENST00000531118 CSGALNACT2Q8N6G5 542 aa8.66□□□□□ -1.02
CD44-232ENST00000531118 RBBP8NLQ8NC74 664 aaPredicted RBP8.66□□□□□ -1.02
CD44-232ENST00000531118 ZSWIM2Q8NEG5 633 aa8.66□□□□□ -1.02
CD44-232ENST00000531118 CACTINQ8WUQ7 758 aaKnown RBP8.66□□□□□ -1.02
CD44-232ENST00000531118 FAM213AQ9BRX8 229 aa8.66□□□□□ -1.02
CD44-232ENST00000531118 KLF16Q9BXK1 252 aaPredicted RBP8.66□□□□□ -1.02
CD44-232ENST00000531118 DPEP3Q9H4B8 488 aa8.66□□□□□ -1.02
CD44-232ENST00000531118 GDF3Q9NR23 364 aa8.66□□□□□ -1.02
CD44-232ENST00000531118 THSD1Q9NS62 852 aa8.66□□□□□ -1.02
CD44-232ENST00000531118 STARD5Q9NSY2 213 aa8.66□□□□□ -1.02
CD44-232ENST00000531118 KCNK4Q9NYG8 393 aa8.66□□□□□ -1.02
CD44-232ENST00000531118 RBAKQ9NYW8 714 aaPredicted RBP8.66□□□□□ -1.02
CD44-232ENST00000531118 PAXBP1Q9Y5B6 917 aa8.66□□□□□ -1.02
CD44-232ENST00000531118 TDRD6O60522 2096 aaKnown RBP8.66□□□□□ -1.02
CD44-232ENST00000531118 DOCK9Q9BZ29 2069 aa8.65□□□□□ -1.02
CD44-232ENST00000531118 A0A1W2PPC4 97 aa8.65□□□□□ -1.02
CD44-232ENST00000531118 A0A1W2PR77 199 aa8.65□□□□□ -1.02
CD44-232ENST00000531118 FAM92AA1XBS5 289 aa8.65□□□□□ -1.02
CD44-232ENST00000531118 CLDN5O00501 218 aa8.65□□□□□ -1.02
CD44-232ENST00000531118 SUV39H1O43463 412 aa8.65□□□□□ -1.02
CD44-232ENST00000531118 EPB41L2O43491 1005 aaKnown RBP8.65□□□□□ -1.02
CD44-232ENST00000531118 AFPP02771 609 aaKnown RBP8.65□□□□□ -1.02
CD44-232ENST00000531118 MYF5P13349 255 aa8.65□□□□□ -1.02
CD44-232ENST00000531118 DDIT3P35638 169 aa8.65□□□□□ -1.02
CD44-232ENST00000531118 LSSP48449 732 aa8.65□□□□□ -1.02
CD44-232ENST00000531118 GOLGA8FQ08AF8 430 aa8.65□□□□□ -1.02
CD44-232ENST00000531118 GOLGA8DPQ0D2H9 430 aa8.65□□□□□ -1.02
CD44-232ENST00000531118 ST3GAL1Q11201 340 aa8.65□□□□□ -1.02
CD44-232ENST00000531118 CAMK2GQ13555 558 aaPredicted RBP8.65□□□□□ -1.02
CD44-232ENST00000531118 UBAP2LQ14157 1087 aaKnown RBP8.65□□□□□ -1.02
CD44-232ENST00000531118 TTC31Q49AM3 519 aaPredicted RBP8.65□□□□□ -1.02
CD44-232ENST00000531118 FYB2Q5VWT5 728 aa8.65□□□□□ -1.02
CD44-232ENST00000531118 CDCP2Q5VXM1 449 aa8.65□□□□□ -1.02
CD44-232ENST00000531118 KCTD17Q8N5Z5 321 aa8.65□□□□□ -1.02
CD44-232ENST00000531118 SCAMP5Q8TAC9 235 aa8.65□□□□□ -1.02
CD44-232ENST00000531118 SORCS1Q8WY21 1168 aa8.65□□□□□ -1.02
CD44-232ENST00000531118 PIWIL1Q96J94 861 aaKnown RBP8.65□□□□□ -1.02
CD44-232ENST00000531118 CDK5RAP3Q96JB5 506 aa8.65□□□□□ -1.02
CD44-232ENST00000531118 DEPDC7Q96QD5 511 aa8.65□□□□□ -1.02
CD44-232ENST00000531118 MMS19Q96T76 1030 aa8.65□□□□□ -1.02
CD44-232ENST00000531118 MRPL45Q9BRJ2 306 aaKnown RBP8.65□□□□□ -1.02
CD44-232ENST00000531118 CIPCQ9C0C6 399 aa8.65□□□□□ -1.02
CD44-232ENST00000531118 ZHX3Q9H4I2 956 aa8.65□□□□□ -1.02
CD44-232ENST00000531118 ALG2Q9H553 416 aa8.65□□□□□ -1.02
CD44-232ENST00000531118 POLR1BQ9H9Y6 1135 aa8.65□□□□□ -1.02
CD44-232ENST00000531118 SGK2Q9HBY8 427 aa8.65□□□□□ -1.02
CD44-232ENST00000531118 AASDHPPTQ9NRN7 309 aa8.65□□□□□ -1.02
CD44-232ENST00000531118 CHORDC1Q9UHD1 332 aaPredicted RBP8.65□□□□□ -1.02
CD44-232ENST00000531118 ATP8B3O60423 1300 aa8.64□□□□□ -1.03
CD44-232ENST00000531118 POM121CA8CG34 1229 aa8.64□□□□□ -1.03
CD44-232ENST00000531118 MDM4O15151 490 aa8.64□□□□□ -1.03
CD44-232ENST00000531118 USP12O75317 370 aa8.64□□□□□ -1.03
CD44-232ENST00000531118 CSO75390 466 aaKnown RBP8.64□□□□□ -1.03
CD44-232ENST00000531118 KRT38O76015 456 aa8.64□□□□□ -1.03
CD44-232ENST00000531118 DNTTP04053 509 aa8.64□□□□□ -1.03
CD44-232ENST00000531118 PGFP49763 221 aa8.64□□□□□ -1.03
CD44-232ENST00000531118 SMCPP49901 116 aaPredicted RBP8.64□□□□□ -1.03
CD44-232ENST00000531118 NXPH1P58417 271 aa8.64□□□□□ -1.03
CD44-232ENST00000531118 RPS14P62263 151 aaKnown RBP8.64□□□□□ -1.03
CD44-232ENST00000531118 IRX6P78412 446 aaPredicted RBP8.64□□□□□ -1.03
CD44-232ENST00000531118 E2F1Q01094 437 aa8.64□□□□□ -1.03
CD44-232ENST00000531118 TLE1Q04724 770 aa8.64□□□□□ -1.03
CD44-232ENST00000531118 ZBTB16Q05516 673 aa8.64□□□□□ -1.03
CD44-232ENST00000531118 BNIP3Q12983 259 aa8.64□□□□□ -1.03
CD44-232ENST00000531118 GNL2Q13823 731 aaKnown RBP8.64□□□□□ -1.03
CD44-232ENST00000531118 ANKRD1Q15327 319 aa8.64□□□□□ -1.03
CD44-232ENST00000531118 E2F5Q15329 346 aa8.64□□□□□ -1.03
CD44-232ENST00000531118 LINC00303Q3SY05 128 aa8.64□□□□□ -1.03
CD44-232ENST00000531118 IGF2-ASQ6U949 168 aa8.64□□□□□ -1.03
CD44-232ENST00000531118 DTHD1Q6ZMT9 781 aa8.64□□□□□ -1.03
CD44-232ENST00000531118 CCDC81Q6ZN84 652 aa8.64□□□□□ -1.03
CD44-232ENST00000531118 OXR1Q8N573 874 aa8.64□□□□□ -1.03
CD44-232ENST00000531118 ZNF366Q8N895 744 aa8.64□□□□□ -1.03
CD44-232ENST00000531118 B3GALNT2Q8NCR0 500 aa8.64□□□□□ -1.03
CD44-232ENST00000531118 HPS1Q92902 700 aa8.64□□□□□ -1.03
CD44-232ENST00000531118 SKA1Q96BD8 255 aa8.64□□□□□ -1.03
CD44-232ENST00000531118 HVCN1Q96D96 273 aa8.64□□□□□ -1.03
CD44-232ENST00000531118 HPDLQ96IR7 371 aa8.64□□□□□ -1.03
CD44-232ENST00000531118 ANKRD36BP1Q96IX9 119 aa8.64□□□□□ -1.03
CD44-232ENST00000531118 C8orf76Q96K31 380 aa8.64□□□□□ -1.03
CD44-232ENST00000531118 B3GNT5Q9BYG0 378 aa8.64□□□□□ -1.03
CD44-232ENST00000531118 GZF1Q9H116 711 aaPredicted RBP8.64□□□□□ -1.03
CD44-232ENST00000531118 SNX25Q9H3E2 840 aa8.64□□□□□ -1.03
CD44-232ENST00000531118 ST6GALNAC4Q9H4F1 302 aa8.64□□□□□ -1.03
CD44-232ENST00000531118 FBRSQ9HAH7 460 aa8.64□□□□□ -1.03
CD44-232ENST00000531118 PDE11AQ9HCR9 933 aa8.64□□□□□ -1.03
CD44-232ENST00000531118 DMAP1Q9NPF5 467 aaPredicted RBP8.64□□□□□ -1.03
CD44-232ENST00000531118 ELOVL2Q9NXB9 296 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms