RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 SLC17A8Q8NDX2 589 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 STKLD1Q8NE28 680 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 PPP1R35Q8TAP8 253 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 DEPTORQ8TB45 409 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 SPATA18Q8TC71 538 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 RNF31Q96EP0 1072 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 NRBF2Q96F24 287 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 MRGPRX1Q96LB2 322 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 HNRNPABQ99729 332 aaKnown RBP5.96□□□□□ -1.46
CD44-231ENST00000531110 B3GNT5Q9BYG0 378 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 SIL1Q9H173 461 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 VPS16Q9H269 839 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 UNKLQ9H9P5 680 aaKnown RBP5.96□□□□□ -1.46
CD44-231ENST00000531110 SYBUQ9NX95 663 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 L1RE1Q9UN81 338 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 MAP3K2Q9Y2U5 619 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 SLC45A1Q9Y2W3 748 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 PCDHA1Q9Y5I3 950 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 FADS3Q9Y5Q0 445 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 HS3ST3A1Q9Y663 406 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 ERBINQ96RT1 1412 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 LAMC1P11047 1609 aa5.96□□□□□ -1.46
CD44-231ENST00000531110 POLR3AO14802 1390 aaPredicted RBP5.95□□□□□ -1.46
CD44-231ENST00000531110 KIF24Q5T7B8 1368 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 LRRD1A4D1F6 860 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 CAPN8A6NHC0 703 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 VSTM5A8MXK1 200 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 E7ENQ6 273 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 LPXNO60711 386 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 FLOT1O75955 427 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 SUN1O94901 812 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 ZBED1O96006 694 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 RHOXF2BP0C7M4 288 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 KRT4P19013 534 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 M6PRP20645 277 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 SYT1P21579 422 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 ARFIP2P53365 341 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 SOX8P57073 446 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 TMF1P82094 1093 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 RUNX1T1Q06455 604 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 DPTQ07507 201 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 ACTN3Q08043 901 aaPredicted RBP5.95□□□□□ -1.46
CD44-231ENST00000531110 STK3Q13188 491 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 MSLNQ13421 630 aaPredicted RBP5.95□□□□□ -1.46
CD44-231ENST00000531110 DYRK1AQ13627 763 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 C20orf194Q5TEA3 1177 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 TAPT1Q6NXT6 567 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 ABRAXAS1Q6UWZ7 409 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 CWC27Q6UX04 472 aaKnown RBP5.95□□□□□ -1.46
CD44-231ENST00000531110 Q6ZPA2 131 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 KRT28Q7Z3Y7 464 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 ZNF554Q86TJ5 538 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 CCAR2Q8N163 923 aaKnown RBP5.95□□□□□ -1.46
CD44-231ENST00000531110 SH2D3CQ8N5H7 860 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 SLC16A11Q8NCK7 471 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 NGDNQ8NEJ9 315 aaKnown RBP5.95□□□□□ -1.46
CD44-231ENST00000531110 LINC00476Q8WZB0 136 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 SLC9A6Q92581 669 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 TBC1D31Q96DN5 1066 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 MOGAT1Q96PD6 335 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 TRIB1Q96RU8 372 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 RHOXF2Q9BQY4 288 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 DPH1Q9BZG8 443 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 NSRP1Q9H0G5 558 aaKnown RBP5.95□□□□□ -1.46
CD44-231ENST00000531110 TTC12Q9H892 705 aaPredicted RBP5.95□□□□□ -1.46
CD44-231ENST00000531110 C12orf10Q9HB07 376 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 CYP4F11Q9HBI6 524 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 CD93Q9NPY3 652 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 OBP2AQ9NY56 170 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 CRNNQ9UBG3 495 aaPredicted RBP5.95□□□□□ -1.46
CD44-231ENST00000531110 RGS17Q9UGC6 210 aaPredicted RBP5.95□□□□□ -1.46
CD44-231ENST00000531110 ATPIF1Q9UII2 106 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 R3HDM2Q9Y2K5 976 aaKnown RBP5.95□□□□□ -1.46
CD44-231ENST00000531110 PLEKHM1Q9Y4G2 1056 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.95□□□□□ -1.46
CD44-231ENST00000531110 CASZ1Q86V15 1759 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 KIF14Q15058 1648 aa5.95□□□□□ -1.46
CD44-231ENST00000531110 EPRSP07814 1512 aaKnown RBP5.94□□□□□ -1.46
CD44-231ENST00000531110 ANKRD50Q9ULJ7 1429 aa5.94□□□□□ -1.46
CD44-231ENST00000531110 A0A0B4J203 849 aa5.94□□□□□ -1.46
CD44-231ENST00000531110 GRID2IPA4D2P6 1211 aa5.94□□□□□ -1.46
CD44-231ENST00000531110 C19orf81C9J6K1 198 aa5.94□□□□□ -1.46
CD44-231ENST00000531110 POLRMTO00411 1230 aaKnown RBP5.94□□□□□ -1.46
CD44-231ENST00000531110 IFRD1O00458 451 aaPredicted RBP5.94□□□□□ -1.46
CD44-231ENST00000531110 YKT6O15498 198 aa5.94□□□□□ -1.46
CD44-231ENST00000531110 PROM1O43490 865 aa5.94□□□□□ -1.46
CD44-231ENST00000531110 B3GALNT1O75752 331 aa5.94□□□□□ -1.46
CD44-231ENST00000531110 RHOBTB3O94955 611 aa5.94□□□□□ -1.46
CD44-231ENST00000531110 AHSGP02765 367 aa5.94□□□□□ -1.46
CD44-231ENST00000531110 HKR1P10072 659 aa5.94□□□□□ -1.46
CD44-231ENST00000531110 SRGNP10124 158 aa5.94□□□□□ -1.46
CD44-231ENST00000531110 PIM1P11309 404 aaPredicted RBP5.94□□□□□ -1.46
CD44-231ENST00000531110 ATF7P17544 494 aaPredicted RBP5.94□□□□□ -1.46
CD44-231ENST00000531110 ATF3P18847 181 aa5.94□□□□□ -1.46
CD44-231ENST00000531110 FDXRP22570 491 aa5.94□□□□□ -1.46
CD44-231ENST00000531110 CLCN2P51788 898 aa5.94□□□□□ -1.46
CD44-231ENST00000531110 GEMIN4P57678 1058 aaKnown RBP5.94□□□□□ -1.46
CD44-231ENST00000531110 MECOMQ03112 1051 aa5.94□□□□□ -1.46
CD44-231ENST00000531110 MRPL28Q13084 256 aaKnown RBP5.94□□□□□ -1.46
CD44-231ENST00000531110 XRCC4Q13426 336 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms