RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 SUSD2Q9UGT4 822 aa16.44■□□□□ 0.22
CPSF1-205ENST00000531042 MUC22E2RYF6 1773 aaPredicted RBP16.43■□□□□ 0.22
CPSF1-205ENST00000531042 OPHN1O60890 802 aa16.43■□□□□ 0.22
CPSF1-205ENST00000531042 FBXO21O94952 628 aa16.43■□□□□ 0.22
CPSF1-205ENST00000531042 GNA14O95837 355 aa16.43■□□□□ 0.22
CPSF1-205ENST00000531042 IGLV3-19P01714 112 aa16.43■□□□□ 0.22
CPSF1-205ENST00000531042 AFPP02771 609 aaKnown RBP16.43■□□□□ 0.22
CPSF1-205ENST00000531042 GNSP15586 552 aa16.43■□□□□ 0.22
CPSF1-205ENST00000531042 MAOBP27338 520 aa16.43■□□□□ 0.22
CPSF1-205ENST00000531042 OXTRP30559 389 aa16.43■□□□□ 0.22
CPSF1-205ENST00000531042 RING1Q06587 406 aa16.43■□□□□ 0.22
CPSF1-205ENST00000531042 PAK1Q13153 545 aa16.43■□□□□ 0.22
CPSF1-205ENST00000531042 PLEKHG6Q3KR16 790 aa16.43■□□□□ 0.22
CPSF1-205ENST00000531042 NUGGCQ68CJ6 796 aa16.43■□□□□ 0.22
CPSF1-205ENST00000531042 CHST9Q7L1S5 443 aa16.43■□□□□ 0.22
CPSF1-205ENST00000531042 ADIPOR2Q86V24 386 aa16.43■□□□□ 0.22
CPSF1-205ENST00000531042 UNC45BQ8IWX7 931 aa16.43■□□□□ 0.22
CPSF1-205ENST00000531042 CADM4Q8NFZ8 388 aa16.43■□□□□ 0.22
CPSF1-205ENST00000531042 DNASE2BQ8WZ79 361 aa16.43■□□□□ 0.22
CPSF1-205ENST00000531042 GOLGA1Q92805 767 aa16.43■□□□□ 0.22
CPSF1-205ENST00000531042 KREMEN1Q96MU8 473 aa16.43■□□□□ 0.22
CPSF1-205ENST00000531042 GPR174Q9BXC1 333 aa16.43■□□□□ 0.22
CPSF1-205ENST00000531042 SRRTQ9BXP5 876 aaKnown RBP16.43■□□□□ 0.22
CPSF1-205ENST00000531042 IRX2Q9BZI1 471 aaPredicted RBP16.43■□□□□ 0.22
CPSF1-205ENST00000531042 ABCB8Q9NUT2 735 aa16.43■□□□□ 0.22
CPSF1-205ENST00000531042 DNAAF2Q9NVR5 837 aaKnown RBP16.43■□□□□ 0.22
CPSF1-205ENST00000531042 PLA2G4CQ9UP65 541 aa16.43■□□□□ 0.22
CPSF1-205ENST00000531042 CNTN6Q9UQ52 1028 aa16.43■□□□□ 0.22
CPSF1-205ENST00000531042 NFE2L3Q9Y4A8 694 aa16.43■□□□□ 0.22
CPSF1-205ENST00000531042 GOLGA6L7A0A1B0GV03 622 aa16.42■□□□□ 0.22
CPSF1-205ENST00000531042 ACSL4O60488 711 aa16.42■□□□□ 0.22
CPSF1-205ENST00000531042 FYNP06241 537 aa16.42■□□□□ 0.22
CPSF1-205ENST00000531042 ACADMP11310 421 aa16.42■□□□□ 0.22
CPSF1-205ENST00000531042 PABPC1P11940 636 aaKnown RBP16.42■□□□□ 0.22
CPSF1-205ENST00000531042 HLA-EP13747 358 aa16.42■□□□□ 0.22
CPSF1-205ENST00000531042 GPD2P43304 727 aa16.42■□□□□ 0.22
CPSF1-205ENST00000531042 RPL34P49207 117 aaKnown RBP16.42■□□□□ 0.22
CPSF1-205ENST00000531042 SLC11A2P49281 568 aa16.42■□□□□ 0.22
CPSF1-205ENST00000531042 TBX4P57082 545 aa16.42■□□□□ 0.22
CPSF1-205ENST00000531042 CAMK2GQ13555 558 aaPredicted RBP16.42■□□□□ 0.22
CPSF1-205ENST00000531042 FAM133BQ5BKY9 247 aaKnown RBP16.42■□□□□ 0.22
CPSF1-205ENST00000531042 MPP7Q5T2T1 576 aa16.42■□□□□ 0.22
CPSF1-205ENST00000531042 PIK3R6Q5UE93 754 aa16.42■□□□□ 0.22
CPSF1-205ENST00000531042 RFWD3Q6PCD5 774 aa16.42■□□□□ 0.22
CPSF1-205ENST00000531042 SCUBE3Q8IX30 993 aa16.42■□□□□ 0.22
CPSF1-205ENST00000531042 AHI1Q8N157 1196 aa16.42■□□□□ 0.22
CPSF1-205ENST00000531042 OR2I1PQ8NGU4 316 aa16.42■□□□□ 0.22
CPSF1-205ENST00000531042 OR2T3Q8NH03 318 aa16.42■□□□□ 0.22
CPSF1-205ENST00000531042 CYB5D2Q8WUJ1 264 aa16.42■□□□□ 0.22
CPSF1-205ENST00000531042 AZIN2Q96A70 460 aa16.42■□□□□ 0.22
CPSF1-205ENST00000531042 NUP58Q9BVL2 599 aa16.42■□□□□ 0.22
CPSF1-205ENST00000531042 MIS12Q9H081 205 aa16.42■□□□□ 0.22
CPSF1-205ENST00000531042 INTS2Q9H0H0 1204 aaKnown RBP16.42■□□□□ 0.22
CPSF1-205ENST00000531042 TMEM245Q9H330 911 aa16.42■□□□□ 0.22
CPSF1-205ENST00000531042 GGA2Q9UJY4 613 aa16.42■□□□□ 0.22
CPSF1-205ENST00000531042 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.42■□□□□ 0.22
CPSF1-205ENST00000531042 PCNX2A6NKB5 2137 aa16.42■□□□□ 0.22
CPSF1-205ENST00000531042 MEI4A8MW99 385 aa16.41■□□□□ 0.22
CPSF1-205ENST00000531042 IRAK2O43187 625 aa16.41■□□□□ 0.22
CPSF1-205ENST00000531042 TBL1XO60907 577 aa16.41■□□□□ 0.22
CPSF1-205ENST00000531042 TOP3BO95985 862 aaKnown RBP16.41■□□□□ 0.22
CPSF1-205ENST00000531042 C7P10643 843 aa16.41■□□□□ 0.22
CPSF1-205ENST00000531042 CD59P13987 128 aa16.41■□□□□ 0.22
CPSF1-205ENST00000531042 SPINK2P20155 84 aa16.41■□□□□ 0.22
CPSF1-205ENST00000531042 SLC6A4P31645 630 aa16.41■□□□□ 0.22
CPSF1-205ENST00000531042 PTPRNQ16849 979 aa16.41■□□□□ 0.22
CPSF1-205ENST00000531042 FNDC3BQ53EP0 1204 aaKnown RBP16.41■□□□□ 0.22
CPSF1-205ENST00000531042 MBLAC2Q68D91 279 aa16.41■□□□□ 0.22
CPSF1-205ENST00000531042 CACUL1Q86Y37 369 aa16.41■□□□□ 0.22
CPSF1-205ENST00000531042 WFDC5Q8TCV5 224 aa16.41■□□□□ 0.22
CPSF1-205ENST00000531042 UBE2TQ9NPD8 197 aaPredicted RBP16.41■□□□□ 0.22
CPSF1-205ENST00000531042 AKAP13Q12802 2813 aa16.41■□□□□ 0.22
CPSF1-205ENST00000531042 CACNA1EQ15878 2313 aa16.4■□□□□ 0.22
CPSF1-205ENST00000531042 A0A1B0GTW7 788 aa16.4■□□□□ 0.22
CPSF1-205ENST00000531042 SPAARA0A1B0GVQ0 90 aa16.4■□□□□ 0.22
CPSF1-205ENST00000531042 METTL12A8MUP2 240 aa16.4■□□□□ 0.22
CPSF1-205ENST00000531042 GJB3O75712 270 aa16.4■□□□□ 0.22
CPSF1-205ENST00000531042 PROS1P07225 676 aa16.4■□□□□ 0.22
CPSF1-205ENST00000531042 DLDP09622 509 aaKnown RBP16.4■□□□□ 0.22
CPSF1-205ENST00000531042 KRT5P13647 590 aa16.4■□□□□ 0.22
CPSF1-205ENST00000531042 CD70P32970 193 aa16.4■□□□□ 0.22
CPSF1-205ENST00000531042 DCAF12L1Q5VU92 463 aa16.4■□□□□ 0.22
CPSF1-205ENST00000531042 NADSYN1Q6IA69 706 aa16.4■□□□□ 0.22
CPSF1-205ENST00000531042 ZNF366Q8N895 744 aa16.4■□□□□ 0.22
CPSF1-205ENST00000531042 DQX1Q8TE96 717 aaKnown RBP16.4■□□□□ 0.22
CPSF1-205ENST00000531042 FCRL2Q96LA5 508 aaPredicted RBP16.4■□□□□ 0.22
CPSF1-205ENST00000531042 ST7Q9NRC1 585 aa16.4■□□□□ 0.22
CPSF1-205ENST00000531042 NAALADL1Q9UQQ1 740 aa16.4■□□□□ 0.22
CPSF1-205ENST00000531042 SART1O43290 800 aaKnown RBP16.39■□□□□ 0.21
CPSF1-205ENST00000531042 FGFR1OPO95684 399 aaKnown RBP16.39■□□□□ 0.21
CPSF1-205ENST00000531042 ATP5BP06576 529 aaKnown RBP16.39■□□□□ 0.21
CPSF1-205ENST00000531042 POLR2EP19388 210 aaKnown RBP16.39■□□□□ 0.21
CPSF1-205ENST00000531042 ACADSBP45954 432 aa16.39■□□□□ 0.21
CPSF1-205ENST00000531042 SIM1P81133 766 aaPredicted RBP16.39■□□□□ 0.21
CPSF1-205ENST00000531042 GRIK2Q13002 908 aa16.39■□□□□ 0.21
CPSF1-205ENST00000531042 SLC14A1Q13336 389 aa16.39■□□□□ 0.21
CPSF1-205ENST00000531042 NNTQ13423 1086 aa16.39■□□□□ 0.21
CPSF1-205ENST00000531042 MEA1Q16626 185 aa16.39■□□□□ 0.21
CPSF1-205ENST00000531042 DENND1BQ6P3S1 775 aa16.39■□□□□ 0.21
CPSF1-205ENST00000531042 UNQ6494/PRO21346Q6UXR6 183 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms