RNA–Protein interactions for RNA: ENST00000530535.5

USP35-206, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2

Gene USP35, Length 2,125 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-206ENST00000530535 C12orf29Q8N999 325 aa16.04■□□□□ 0.16
USP35-206ENST00000530535 EBNA1BP2Q99848 306 aaKnown RBP16.04■□□□□ 0.16
USP35-206ENST00000530535 MTG1Q9BT17 334 aaPredicted RBP16.04■□□□□ 0.16
USP35-206ENST00000530535 WWP1Q9H0M0 922 aa16.04■□□□□ 0.16
USP35-206ENST00000530535 ASB7Q9H672 318 aa16.04■□□□□ 0.16
USP35-206ENST00000530535 NGRNQ9NPE2 291 aaKnown RBP16.04■□□□□ 0.16
USP35-206ENST00000530535 XPNPEP3Q9NQH7 507 aa16.04■□□□□ 0.16
USP35-206ENST00000530535 PCMTD2Q9NV79 361 aa16.04■□□□□ 0.16
USP35-206ENST00000530535 PRMT7Q9NVM4 692 aaPredicted RBP16.04■□□□□ 0.16
USP35-206ENST00000530535 PPARGC1AQ9UBK2 798 aaKnown RBP16.04■□□□□ 0.16
USP35-206ENST00000530535 MDM4O15151 490 aa16.03■□□□□ 0.16
USP35-206ENST00000530535 KRT38O76015 456 aa16.03■□□□□ 0.16
USP35-206ENST00000530535 P4HA1P13674 534 aa16.03■□□□□ 0.16
USP35-206ENST00000530535 TPSB2P20231 275 aa16.03■□□□□ 0.16
USP35-206ENST00000530535 HDAC4P56524 1084 aa16.03■□□□□ 0.16
USP35-206ENST00000530535 SLC10A2Q12908 348 aaPredicted RBP16.03■□□□□ 0.16
USP35-206ENST00000530535 TPSAB1Q15661 275 aa16.03■□□□□ 0.16
USP35-206ENST00000530535 GOLGA7BQ2TAP0 167 aa16.03■□□□□ 0.16
USP35-206ENST00000530535 PMF1Q6P1K2 205 aa16.03■□□□□ 0.16
USP35-206ENST00000530535 SCYL2Q6P3W7 929 aa16.03■□□□□ 0.16
USP35-206ENST00000530535 NUDCD3Q8IVD9 361 aa16.03■□□□□ 0.16
USP35-206ENST00000530535 PDCD7Q8N8D1 485 aaKnown RBP16.03■□□□□ 0.16
USP35-206ENST00000530535 NLRP7Q8WX94 980 aa16.03■□□□□ 0.16
USP35-206ENST00000530535 TBCBQ99426 244 aa16.03■□□□□ 0.16
USP35-206ENST00000530535 NRDE2Q9H7Z3 1164 aa16.03■□□□□ 0.16
USP35-206ENST00000530535 ZNF212Q9UDV6 495 aa16.03■□□□□ 0.16
USP35-206ENST00000530535 MARCOQ9UEW3 520 aaPredicted RBP16.03■□□□□ 0.16
USP35-206ENST00000530535 THSD7BQ9C0I4 1608 aa16.03■□□□□ 0.16
USP35-206ENST00000530535 SMIM35A0A1B0GVV1 85 aa16.03■□□□□ 0.16
USP35-206ENST00000530535 ZNF487B1APH4 448 aa16.03■□□□□ 0.16
USP35-206ENST00000530535 F8W8V4 182 aa16.03■□□□□ 0.16
USP35-206ENST00000530535 BIRC5O15392 142 aa16.03■□□□□ 0.16
USP35-206ENST00000530535 ADAMTS4O75173 837 aa16.03■□□□□ 0.16
USP35-206ENST00000530535 GCATO75600 419 aa16.03■□□□□ 0.16
USP35-206ENST00000530535 NPTXRO95502 500 aa16.03■□□□□ 0.16
USP35-206ENST00000530535 STAU1O95793 577 aaKnown RBP16.03■□□□□ 0.16
USP35-206ENST00000530535 CYP2C9P11712 490 aa16.03■□□□□ 0.16
USP35-206ENST00000530535 TFE3P19532 575 aaPredicted RBP16.03■□□□□ 0.16
USP35-206ENST00000530535 AQP5P55064 265 aa16.03■□□□□ 0.16
USP35-206ENST00000530535 MDH1BQ5I0G3 518 aa16.03■□□□□ 0.16
USP35-206ENST00000530535 NAIF1Q69YI7 327 aaPredicted RBP16.03■□□□□ 0.16
USP35-206ENST00000530535 TMEM154Q6P9G4 183 aa16.03■□□□□ 0.16
USP35-206ENST00000530535 TIFABQ6ZNK6 161 aa16.03■□□□□ 0.16
USP35-206ENST00000530535 TTC30AQ86WT1 665 aa16.03■□□□□ 0.16
USP35-206ENST00000530535 NDUFAF2Q8N183 169 aa16.03■□□□□ 0.16
USP35-206ENST00000530535 C7orf31Q8N865 590 aa16.03■□□□□ 0.16
USP35-206ENST00000530535 FAM161BQ96MY7 647 aa16.03■□□□□ 0.16
USP35-206ENST00000530535 YIPF3Q9GZM5 350 aa16.03■□□□□ 0.16
USP35-206ENST00000530535 FAM49AQ9H0Q0 323 aaPredicted RBP16.03■□□□□ 0.16
USP35-206ENST00000530535 TAGLN3Q9UI15 199 aa16.03■□□□□ 0.16
USP35-206ENST00000530535 NME7Q9Y5B8 376 aa16.03■□□□□ 0.16
USP35-206ENST00000530535 C17orf102A2RUQ5 167 aa16.02■□□□□ 0.16
USP35-206ENST00000530535 SP100P23497 879 aaPredicted RBP16.02■□□□□ 0.16
USP35-206ENST00000530535 GRIA1P42261 906 aa16.02■□□□□ 0.16
USP35-206ENST00000530535 CDC42EP1Q00587 391 aa16.02■□□□□ 0.16
USP35-206ENST00000530535 GBE1Q04446 702 aa16.02■□□□□ 0.16
USP35-206ENST00000530535 MROH9Q5TGP6 573 aa16.02■□□□□ 0.16
USP35-206ENST00000530535 CXCL17Q6UXB2 119 aa16.02■□□□□ 0.16
USP35-206ENST00000530535 ZNF410Q86VK4 478 aa16.02■□□□□ 0.16
USP35-206ENST00000530535 CDKL3Q8IVW4 592 aaPredicted RBP16.02■□□□□ 0.16
USP35-206ENST00000530535 ARHGAP24Q8N264 748 aa16.02■□□□□ 0.16
USP35-206ENST00000530535 STKLD1Q8NE28 680 aa16.02■□□□□ 0.16
USP35-206ENST00000530535 STMN2Q93045 179 aa16.02■□□□□ 0.16
USP35-206ENST00000530535 IFT43Q96FT9 208 aa16.02■□□□□ 0.16
USP35-206ENST00000530535 CPB2Q96IY4 423 aa16.02■□□□□ 0.16
USP35-206ENST00000530535 ZNF778Q96MU6 729 aa16.02■□□□□ 0.16
USP35-206ENST00000530535 PANX3Q96QZ0 392 aa16.02■□□□□ 0.16
USP35-206ENST00000530535 NT5C1AQ9BXI3 368 aa16.02■□□□□ 0.16
USP35-206ENST00000530535 SLC4A5Q9BY07 1137 aa16.02■□□□□ 0.16
USP35-206ENST00000530535 MIS12Q9H081 205 aa16.02■□□□□ 0.16
USP35-206ENST00000530535 MOCS1Q9NZB8 636 aa16.02■□□□□ 0.16
USP35-206ENST00000530535 KIAA1257Q9ULG3 409 aa16.02■□□□□ 0.16
USP35-206ENST00000530535 PCDHA11Q9Y5I1 949 aa16.02■□□□□ 0.16
USP35-206ENST00000530535 TREHO43280 583 aa16.01■□□□□ 0.15
USP35-206ENST00000530535 TM7SF2O76062 418 aa16.01■□□□□ 0.15
USP35-206ENST00000530535 KITP10721 976 aa16.01■□□□□ 0.15
USP35-206ENST00000530535 CHRM1P11229 460 aaPredicted RBP16.01■□□□□ 0.15
USP35-206ENST00000530535 GNAT1P11488 350 aa16.01■□□□□ 0.15
USP35-206ENST00000530535 CYP2F1P24903 491 aa16.01■□□□□ 0.15
USP35-206ENST00000530535 IRX1P78414 480 aaPredicted RBP16.01■□□□□ 0.15
USP35-206ENST00000530535 WASHC5Q12768 1159 aa16.01■□□□□ 0.15
USP35-206ENST00000530535 TUBB3Q13509 450 aa16.01■□□□□ 0.15
USP35-206ENST00000530535 RCN2Q14257 317 aa16.01■□□□□ 0.15
USP35-206ENST00000530535 TMEM132DQ14C87 1099 aa16.01■□□□□ 0.15
USP35-206ENST00000530535 PPP1R26Q5T8A7 1209 aaPredicted RBP16.01■□□□□ 0.15
USP35-206ENST00000530535 OR52E8Q6IFG1 317 aa16.01■□□□□ 0.15
USP35-206ENST00000530535 ZCCHC23Q6ZST2 131 aa16.01■□□□□ 0.15
USP35-206ENST00000530535 ARCQ7LC44 396 aa16.01■□□□□ 0.15
USP35-206ENST00000530535 NET1Q7Z628 596 aaPredicted RBP16.01■□□□□ 0.15
USP35-206ENST00000530535 CRLF3Q8IUI8 442 aa16.01■□□□□ 0.15
USP35-206ENST00000530535 ZNF483Q8TF39 744 aaPredicted RBP16.01■□□□□ 0.15
USP35-206ENST00000530535 CLPTM1LQ96KA5 538 aa16.01■□□□□ 0.15
USP35-206ENST00000530535 EBF4Q9BQW3 602 aa16.01■□□□□ 0.15
USP35-206ENST00000530535 EMCNQ9ULC0 261 aa16.01■□□□□ 0.15
USP35-206ENST00000530535 ASB3Q9Y575 518 aa16.01■□□□□ 0.15
USP35-206ENST00000530535 SDR42E2A6NKP2 422 aa16.01■□□□□ 0.15
USP35-206ENST00000530535 PRR5-ARHGAP8B1AHC4 643 aa16.01■□□□□ 0.15
USP35-206ENST00000530535 PAPSS1O43252 624 aaPredicted RBP16.01■□□□□ 0.15
USP35-206ENST00000530535 SERPINA6P08185 405 aa16.01■□□□□ 0.15
USP35-206ENST00000530535 HOXC8P31273 242 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms