RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 LRRC38Q5VT99 294 aa11.03□□□□□ -0.64
SOX6-213ENST00000530378 NADSYN1Q6IA69 706 aa11.03□□□□□ -0.64
SOX6-213ENST00000530378 RFWD3Q6PCD5 774 aa11.03□□□□□ -0.64
SOX6-213ENST00000530378 KLHDC10Q6PID8 442 aa11.03□□□□□ -0.64
SOX6-213ENST00000530378 SPOCD1Q6ZMY3 1216 aa11.03□□□□□ -0.64
SOX6-213ENST00000530378 C14orf80Q86SX3 495 aa11.03□□□□□ -0.64
SOX6-213ENST00000530378 CHSY1Q86X52 802 aa11.03□□□□□ -0.64
SOX6-213ENST00000530378 CIR1Q86X95 450 aaPredicted RBP11.03□□□□□ -0.64
SOX6-213ENST00000530378 CCDC33Q8N5R6 958 aa11.03□□□□□ -0.64
SOX6-213ENST00000530378 SH3RF2Q8TEC5 729 aa11.03□□□□□ -0.64
SOX6-213ENST00000530378 FGF13Q92913 245 aa11.03□□□□□ -0.64
SOX6-213ENST00000530378 USP13Q92995 863 aaPredicted RBP11.03□□□□□ -0.64
SOX6-213ENST00000530378 BHMTQ93088 406 aa11.03□□□□□ -0.64
SOX6-213ENST00000530378 MYEOVQ96EZ4 313 aa11.03□□□□□ -0.64
SOX6-213ENST00000530378 S1PR5Q9H228 398 aa11.03□□□□□ -0.64
SOX6-213ENST00000530378 POMKQ9H5K3 350 aa11.03□□□□□ -0.64
SOX6-213ENST00000530378 PCDH18Q9HCL0 1135 aa11.03□□□□□ -0.64
SOX6-213ENST00000530378 MTMR10Q9NXD2 777 aa11.03□□□□□ -0.64
SOX6-213ENST00000530378 ARHGEF38Q9NXL2 777 aa11.03□□□□□ -0.64
SOX6-213ENST00000530378 VANGL2Q9ULK5 521 aa11.03□□□□□ -0.64
SOX6-213ENST00000530378 HBS1LQ9Y450 684 aaKnown RBP11.03□□□□□ -0.64
SOX6-213ENST00000530378 HS3ST4Q9Y661 456 aa11.03□□□□□ -0.64
SOX6-213ENST00000530378 NUP205Q92621 2012 aa11.03□□□□□ -0.64
SOX6-213ENST00000530378 C3orf70A6NLC5 250 aaPredicted RBP11.02□□□□□ -0.64
SOX6-213ENST00000530378 KCNU1A8MYU2 1149 aa11.02□□□□□ -0.64
SOX6-213ENST00000530378 LEFTY2O00292 366 aa11.02□□□□□ -0.64
SOX6-213ENST00000530378 EEF2KO00418 725 aaKnown RBP11.02□□□□□ -0.64
SOX6-213ENST00000530378 TSPAN3O60637 253 aa11.02□□□□□ -0.64
SOX6-213ENST00000530378 ZRANB2O95218 330 aaKnown RBP eCLIP11.02□□□□□ -0.64
SOX6-213ENST00000530378 MAP3K6O95382 1288 aa11.02□□□□□ -0.64
SOX6-213ENST00000530378 FGGP02679 453 aa11.02□□□□□ -0.64
SOX6-213ENST00000530378 HOXB8P17481 243 aaPredicted RBP11.02□□□□□ -0.64
SOX6-213ENST00000530378 GBP2P32456 591 aaPredicted RBP11.02□□□□□ -0.64
SOX6-213ENST00000530378 HARS2P49590 506 aaKnown RBP11.02□□□□□ -0.64
SOX6-213ENST00000530378 ADCY2Q08462 1091 aa11.02□□□□□ -0.64
SOX6-213ENST00000530378 BOLA3Q53S33 107 aa11.02□□□□□ -0.64
SOX6-213ENST00000530378 BRMS1LQ5PSV4 323 aa11.02□□□□□ -0.64
SOX6-213ENST00000530378 ATAT1Q5SQI0 421 aa11.02□□□□□ -0.64
SOX6-213ENST00000530378 RWDD4Q6NW29 188 aaKnown RBP11.02□□□□□ -0.64
SOX6-213ENST00000530378 RFX6Q8HWS3 928 aa11.02□□□□□ -0.64
SOX6-213ENST00000530378 ARID3BQ8IVW6 561 aaPredicted RBP11.02□□□□□ -0.64
SOX6-213ENST00000530378 EXD1Q8NHP7 514 aa11.02□□□□□ -0.64
SOX6-213ENST00000530378 TEKT4Q8WW24 435 aa11.02□□□□□ -0.64
SOX6-213ENST00000530378 NTAN1Q96AB6 310 aa11.02□□□□□ -0.64
SOX6-213ENST00000530378 PLD4Q96BZ4 506 aa11.02□□□□□ -0.64
SOX6-213ENST00000530378 RSPRY1Q96DX4 576 aa11.02□□□□□ -0.64
SOX6-213ENST00000530378 MSLNLQ96KJ4 702 aa11.02□□□□□ -0.64
SOX6-213ENST00000530378 MYADMQ96S97 322 aa11.02□□□□□ -0.64
SOX6-213ENST00000530378 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.02□□□□□ -0.64
SOX6-213ENST00000530378 DDX56Q9NY93 547 aaKnown RBP11.02□□□□□ -0.64
SOX6-213ENST00000530378 OR12D3Q9UGF7 316 aa11.02□□□□□ -0.64
SOX6-213ENST00000530378 USP15Q9Y4E8 981 aaPredicted RBP11.02□□□□□ -0.64
SOX6-213ENST00000530378 SHROOM3Q8TF72 1996 aa11.02□□□□□ -0.64
SOX6-213ENST00000530378 PDE2AO00408 941 aaPredicted RBP11.02□□□□□ -0.65
SOX6-213ENST00000530378 SLC6A4P31645 630 aa11.02□□□□□ -0.65
SOX6-213ENST00000530378 CDKN2BP42772 138 aa11.02□□□□□ -0.65
SOX6-213ENST00000530378 TPI1P60174 286 aa11.02□□□□□ -0.65
SOX6-213ENST00000530378 SLC7A9P82251 487 aa11.02□□□□□ -0.65
SOX6-213ENST00000530378 COG7P83436 770 aa11.02□□□□□ -0.65
SOX6-213ENST00000530378 SCAPQ12770 1279 aa11.02□□□□□ -0.65
SOX6-213ENST00000530378 NNTQ13423 1086 aa11.02□□□□□ -0.65
SOX6-213ENST00000530378 DPYSL2Q16555 572 aa11.02□□□□□ -0.65
SOX6-213ENST00000530378 MS4A13Q5J8X5 152 aa11.02□□□□□ -0.65
SOX6-213ENST00000530378 FAM78AQ5JUQ0 283 aa11.02□□□□□ -0.65
SOX6-213ENST00000530378 CCDC181Q5TID7 509 aa11.02□□□□□ -0.65
SOX6-213ENST00000530378 NUGGCQ68CJ6 796 aa11.02□□□□□ -0.65
SOX6-213ENST00000530378 BBS7Q8IWZ6 715 aa11.02□□□□□ -0.65
SOX6-213ENST00000530378 ZNF276Q8N554 614 aa11.02□□□□□ -0.65
SOX6-213ENST00000530378 ATP6V0D2Q8N8Y2 350 aa11.02□□□□□ -0.65
SOX6-213ENST00000530378 SMRP1Q8NCR6 262 aa11.02□□□□□ -0.65
SOX6-213ENST00000530378 RBM41Q96IZ5 413 aaKnown RBP11.02□□□□□ -0.65
SOX6-213ENST00000530378 NCAPGQ9BPX3 1015 aa11.02□□□□□ -0.65
SOX6-213ENST00000530378 CARD9Q9H257 536 aa11.02□□□□□ -0.65
SOX6-213ENST00000530378 UBE2ZQ9H832 354 aaPredicted RBP11.02□□□□□ -0.65
SOX6-213ENST00000530378 PRDM6Q9NQX0 595 aa11.02□□□□□ -0.65
SOX6-213ENST00000530378 MPP6Q9NZW5 540 aa11.02□□□□□ -0.65
SOX6-213ENST00000530378 CWC15Q9P013 229 aaKnown RBP11.02□□□□□ -0.65
SOX6-213ENST00000530378 CD207Q9UJ71 328 aa11.02□□□□□ -0.65
SOX6-213ENST00000530378 AGO1Q9UL18 857 aaKnown RBP11.02□□□□□ -0.65
SOX6-213ENST00000530378 SH3BP1Q9Y3L3 701 aa11.02□□□□□ -0.65
SOX6-213ENST00000530378 KIF26AQ9ULI4 1882 aaPredicted RBP11.01□□□□□ -0.65
SOX6-213ENST00000530378 hCG_1818297A0A087WSY0 165 aa11.01□□□□□ -0.65
SOX6-213ENST00000530378 LRIG2O94898 1065 aa11.01□□□□□ -0.65
SOX6-213ENST00000530378 SLC2A3P11169 496 aa11.01□□□□□ -0.65
SOX6-213ENST00000530378 TCP1P17987 556 aaKnown RBP11.01□□□□□ -0.65
SOX6-213ENST00000530378 AMPD1P23109 780 aa11.01□□□□□ -0.65
SOX6-213ENST00000530378 DDX6P26196 483 aaKnown RBP eCLIP11.01□□□□□ -0.65
SOX6-213ENST00000530378 SGSHP51688 502 aa11.01□□□□□ -0.65
SOX6-213ENST00000530378 ARSEP51690 589 aa11.01□□□□□ -0.65
SOX6-213ENST00000530378 KPNA1P52294 538 aaPredicted RBP11.01□□□□□ -0.65
SOX6-213ENST00000530378 ITIH3Q06033 890 aa11.01□□□□□ -0.65
SOX6-213ENST00000530378 RING1Q06587 406 aa11.01□□□□□ -0.65
SOX6-213ENST00000530378 FAM133BQ5BKY9 247 aaKnown RBP11.01□□□□□ -0.65
SOX6-213ENST00000530378 FAM182AQ5T1J6 154 aa11.01□□□□□ -0.65
SOX6-213ENST00000530378 TFAP2DQ7Z6R9 452 aa11.01□□□□□ -0.65
SOX6-213ENST00000530378 RCOR2Q8IZ40 523 aa11.01□□□□□ -0.65
SOX6-213ENST00000530378 LGI2Q8N0V4 545 aa11.01□□□□□ -0.65
SOX6-213ENST00000530378 CFAP52Q8N1V2 620 aa11.01□□□□□ -0.65
SOX6-213ENST00000530378 LRRN4Q8WUT4 740 aa11.01□□□□□ -0.65
SOX6-213ENST00000530378 BTN2A3PQ96KV6 586 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms