RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 EIF2AK1Q9BQI3 630 aaKnown RBP5.22□□□□□ -1.57
C11orf88-204ENST00000529661 TAF1DQ9H5J8 278 aaPredicted RBP5.22□□□□□ -1.57
C11orf88-204ENST00000529661 RIC8AQ9NPQ8 531 aa5.22□□□□□ -1.57
C11orf88-204ENST00000529661 TRIM36Q9NQ86 728 aa5.22□□□□□ -1.57
C11orf88-204ENST00000529661 GGA3Q9NZ52 723 aa5.22□□□□□ -1.57
C11orf88-204ENST00000529661 ZNF70Q9UC06 446 aaPredicted RBP5.22□□□□□ -1.57
C11orf88-204ENST00000529661 STEAP1Q9UHE8 339 aa5.22□□□□□ -1.57
C11orf88-204ENST00000529661 FEM1BQ9UK73 627 aa5.22□□□□□ -1.57
C11orf88-204ENST00000529661 ZNF804BA4D1E1 1349 aa5.22□□□□□ -1.57
C11orf88-204ENST00000529661 TMEM232C9JQI7 657 aa5.21□□□□□ -1.58
C11orf88-204ENST00000529661 MT-CO3P00414 261 aa5.21□□□□□ -1.58
C11orf88-204ENST00000529661 APEHP13798 732 aaKnown RBP5.21□□□□□ -1.58
C11orf88-204ENST00000529661 MCM5P33992 734 aa5.21□□□□□ -1.58
C11orf88-204ENST00000529661 DDIT3P35638 169 aa5.21□□□□□ -1.58
C11orf88-204ENST00000529661 TBX2Q13207 712 aaPredicted RBP5.21□□□□□ -1.58
C11orf88-204ENST00000529661 ZNF268Q14587 947 aaPredicted RBP5.21□□□□□ -1.58
C11orf88-204ENST00000529661 NFRKBQ6P4R8 1299 aa5.21□□□□□ -1.58
C11orf88-204ENST00000529661 RAB11FIP2Q7L804 512 aa5.21□□□□□ -1.58
C11orf88-204ENST00000529661 TTC30AQ86WT1 665 aa5.21□□□□□ -1.58
C11orf88-204ENST00000529661 NGDNQ8NEJ9 315 aaKnown RBP5.21□□□□□ -1.58
C11orf88-204ENST00000529661 ASB12Q8WXK4 309 aa5.21□□□□□ -1.58
C11orf88-204ENST00000529661 HERVK_113Q902F9 699 aa5.21□□□□□ -1.58
C11orf88-204ENST00000529661 MPP4Q96JB8 637 aa5.21□□□□□ -1.58
C11orf88-204ENST00000529661 PAAF1Q9BRP4 392 aa5.21□□□□□ -1.58
C11orf88-204ENST00000529661 PYM1Q9BRP8 204 aaKnown RBP5.21□□□□□ -1.58
C11orf88-204ENST00000529661 EFHD1Q9BUP0 239 aa5.21□□□□□ -1.58
C11orf88-204ENST00000529661 RXFP3Q9NSD7 469 aa5.21□□□□□ -1.58
C11orf88-204ENST00000529661 KLHL13Q9P2N7 655 aa5.21□□□□□ -1.58
C11orf88-204ENST00000529661 CNTN6Q9UQ52 1028 aa5.21□□□□□ -1.58
C11orf88-204ENST00000529661 KAT6AQ92794 2004 aa5.21□□□□□ -1.58
C11orf88-204ENST00000529661 WDR17Q8IZU2 1322 aa5.21□□□□□ -1.58
C11orf88-204ENST00000529661 SMIM35A0A1B0GVV1 85 aa5.2□□□□□ -1.58
C11orf88-204ENST00000529661 EFCAB8A8MWE9 144 aa5.2□□□□□ -1.58
C11orf88-204ENST00000529661 KCNU1A8MYU2 1149 aa5.2□□□□□ -1.58
C11orf88-204ENST00000529661 BTBD19C9JJ37 291 aa5.2□□□□□ -1.58
C11orf88-204ENST00000529661 H0Y3Z8 333 aa5.2□□□□□ -1.58
C11orf88-204ENST00000529661 AARSP49588 968 aaKnown RBP eCLIP5.2□□□□□ -1.58
C11orf88-204ENST00000529661 PRKAA2P54646 552 aa5.2□□□□□ -1.58
C11orf88-204ENST00000529661 EIF4A1P60842 406 aaKnown RBP5.2□□□□□ -1.58
C11orf88-204ENST00000529661 DEUP1Q05D60 604 aa5.2□□□□□ -1.58
C11orf88-204ENST00000529661 HNRNPA0Q13151 305 aaKnown RBP5.2□□□□□ -1.58
C11orf88-204ENST00000529661 CSHL1Q14406 222 aa5.2□□□□□ -1.58
C11orf88-204ENST00000529661 MAPRE1Q15691 268 aaKnown RBP5.2□□□□□ -1.58
C11orf88-204ENST00000529661 ST3GAL2Q16842 350 aa5.2□□□□□ -1.58
C11orf88-204ENST00000529661 TTC22Q5TAA0 569 aa5.2□□□□□ -1.58
C11orf88-204ENST00000529661 ANKRD45Q5TZF3 282 aa5.2□□□□□ -1.58
C11orf88-204ENST00000529661 MSANTD2Q6P1R3 559 aa5.2□□□□□ -1.58
C11orf88-204ENST00000529661 DCDC5Q6ZRR9 648 aa5.2□□□□□ -1.58
C11orf88-204ENST00000529661 ANKS1BQ7Z6G8 1248 aa5.2□□□□□ -1.58
C11orf88-204ENST00000529661 P3H2Q8IVL5 708 aa5.2□□□□□ -1.58
C11orf88-204ENST00000529661 CPOQ8IVL8 374 aa5.2□□□□□ -1.58
C11orf88-204ENST00000529661 GALNT16Q8N428 558 aa5.2□□□□□ -1.58
C11orf88-204ENST00000529661 NAXEQ8NCW5 288 aa5.2□□□□□ -1.58
C11orf88-204ENST00000529661 VPS50Q96JG6 964 aa5.2□□□□□ -1.58
C11orf88-204ENST00000529661 SEPSECSQ9HD40 501 aaKnown RBP5.2□□□□□ -1.58
C11orf88-204ENST00000529661 ASAP1Q9ULH1 1129 aa5.2□□□□□ -1.58
C11orf88-204ENST00000529661 NFU1Q9UMS0 254 aa5.2□□□□□ -1.58
C11orf88-204ENST00000529661 CRYL1Q9Y2S2 319 aa5.2□□□□□ -1.58
C11orf88-204ENST00000529661 COL3A1P02461 1466 aaPredicted RBP5.2□□□□□ -1.58
C11orf88-204ENST00000529661 A8MVJ9 347 aa5.19□□□□□ -1.58
C11orf88-204ENST00000529661 INO80B-WBP1J3KQ70 363 aa5.19□□□□□ -1.58
C11orf88-204ENST00000529661 RNF8O76064 485 aa5.19□□□□□ -1.58
C11orf88-204ENST00000529661 CER1O95813 267 aa5.19□□□□□ -1.58
C11orf88-204ENST00000529661 TK1P04183 234 aa5.19□□□□□ -1.58
C11orf88-204ENST00000529661 PBX1P40424 430 aa5.19□□□□□ -1.58
C11orf88-204ENST00000529661 ACTR2P61160 394 aa5.19□□□□□ -1.58
C11orf88-204ENST00000529661 TLE2Q04725 743 aa5.19□□□□□ -1.58
C11orf88-204ENST00000529661 KLF9Q13886 244 aaPredicted RBP5.19□□□□□ -1.58
C11orf88-204ENST00000529661 KCNJ12Q14500 433 aa5.19□□□□□ -1.58
C11orf88-204ENST00000529661 KCNB1Q14721 858 aa5.19□□□□□ -1.58
C11orf88-204ENST00000529661 MORN5Q5VZ52 161 aa5.19□□□□□ -1.58
C11orf88-204ENST00000529661 PIK3AP1Q6ZUJ8 805 aa5.19□□□□□ -1.58
C11orf88-204ENST00000529661 TRABD2AQ86V40 505 aa5.19□□□□□ -1.58
C11orf88-204ENST00000529661 LRRTM4Q86VH4 590 aa5.19□□□□□ -1.58
C11orf88-204ENST00000529661 TMTC1Q8IUR5 882 aa5.19□□□□□ -1.58
C11orf88-204ENST00000529661 CSGALNACT1Q8TDX6 532 aa5.19□□□□□ -1.58
C11orf88-204ENST00000529661 AFG1LQ8WV93 481 aa5.19□□□□□ -1.58
C11orf88-204ENST00000529661 OVCA2Q8WZ82 227 aa5.19□□□□□ -1.58
C11orf88-204ENST00000529661 MAELQ96JY0 434 aaKnown RBP5.19□□□□□ -1.58
C11orf88-204ENST00000529661 USP29Q9HBJ7 922 aa5.19□□□□□ -1.58
C11orf88-204ENST00000529661 G6PC2Q9NQR9 355 aa5.19□□□□□ -1.58
C11orf88-204ENST00000529661 SLC13A4Q9UKG4 626 aa5.19□□□□□ -1.58
C11orf88-204ENST00000529661 C19orf53Q9UNZ5 99 aaPredicted RBP5.19□□□□□ -1.58
C11orf88-204ENST00000529661 LMTK3Q96Q04 1460 aa5.19□□□□□ -1.58
C11orf88-204ENST00000529661 HOXC11O43248 304 aaPredicted RBP5.18□□□□□ -1.58
C11orf88-204ENST00000529661 CTIFO43310 598 aaKnown RBP5.18□□□□□ -1.58
C11orf88-204ENST00000529661 CA12O43570 354 aa5.18□□□□□ -1.58
C11orf88-204ENST00000529661 PPP6R2O75170 966 aa5.18□□□□□ -1.58
C11orf88-204ENST00000529661 RPP40O75818 363 aaKnown RBP5.18□□□□□ -1.58
C11orf88-204ENST00000529661 WDR47O94967 919 aa5.18□□□□□ -1.58
C11orf88-204ENST00000529661 LARGE1O95461 756 aa5.18□□□□□ -1.58
C11orf88-204ENST00000529661 POLBP06746 335 aa5.18□□□□□ -1.58
C11orf88-204ENST00000529661 TMEM225BP0DP42 221 aa5.18□□□□□ -1.58
C11orf88-204ENST00000529661 ADRA1DP25100 572 aa5.18□□□□□ -1.58
C11orf88-204ENST00000529661 CNTFP26441 200 aa5.18□□□□□ -1.58
C11orf88-204ENST00000529661 PAPOLAP51003 745 aaKnown RBP5.18□□□□□ -1.58
C11orf88-204ENST00000529661 TXNL4AP83876 142 aaKnown RBP5.18□□□□□ -1.58
C11orf88-204ENST00000529661 LARS2Q15031 903 aaKnown RBP5.18□□□□□ -1.58
C11orf88-204ENST00000529661 SMAD1Q15797 465 aaKnown RBP5.18□□□□□ -1.58
C11orf88-204ENST00000529661 ETFDHQ16134 617 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms