RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 SCN4AP35499 1836 aa5.55□□□□□ -1.52
CSDE1-212ENST00000529046 COL11A2P13942 1736 aaPredicted RBP5.55□□□□□ -1.52
CSDE1-212ENST00000529046 TIAM2Q8IVF5 1701 aa5.55□□□□□ -1.52
CSDE1-212ENST00000529046 CCDC151A5D8V7 595 aa5.55□□□□□ -1.52
CSDE1-212ENST00000529046 RAB27BO00194 218 aa5.55□□□□□ -1.52
CSDE1-212ENST00000529046 CHL1O00533 1208 aa5.55□□□□□ -1.52
CSDE1-212ENST00000529046 EIF5BO60841 1220 aaKnown RBP5.55□□□□□ -1.52
CSDE1-212ENST00000529046 BBOX1O75936 387 aa5.55□□□□□ -1.52
CSDE1-212ENST00000529046 NTSR2O95665 410 aa5.55□□□□□ -1.52
CSDE1-212ENST00000529046 ONECUT2O95948 504 aa5.55□□□□□ -1.52
CSDE1-212ENST00000529046 PDHA1P08559 390 aa5.55□□□□□ -1.52
CSDE1-212ENST00000529046 IL6RP08887 468 aaPredicted RBP5.55□□□□□ -1.52
CSDE1-212ENST00000529046 HOXB7P09629 217 aa5.55□□□□□ -1.52
CSDE1-212ENST00000529046 HARSP12081 509 aaKnown RBP5.55□□□□□ -1.52
CSDE1-212ENST00000529046 TPH1P17752 444 aa5.55□□□□□ -1.52
CSDE1-212ENST00000529046 EEF1GP26641 437 aaKnown RBP5.55□□□□□ -1.52
CSDE1-212ENST00000529046 SLC5A2P31639 672 aa5.55□□□□□ -1.52
CSDE1-212ENST00000529046 PIP4K2AP48426 406 aaPredicted RBP5.55□□□□□ -1.52
CSDE1-212ENST00000529046 HSPA7P48741 367 aa5.55□□□□□ -1.52
CSDE1-212ENST00000529046 MAPK10P53779 464 aa5.55□□□□□ -1.52
CSDE1-212ENST00000529046 BRD3Q15059 726 aa5.55□□□□□ -1.52
CSDE1-212ENST00000529046 HSP90AB3PQ58FF7 597 aa5.55□□□□□ -1.52
CSDE1-212ENST00000529046 MANEALQ5VSG8 457 aa5.55□□□□□ -1.52
CSDE1-212ENST00000529046 SUSD4Q5VX71 490 aa5.55□□□□□ -1.52
CSDE1-212ENST00000529046 KIF6Q6ZMV9 814 aa5.55□□□□□ -1.52
CSDE1-212ENST00000529046 GRASPQ7Z6J2 395 aaPredicted RBP5.55□□□□□ -1.52
CSDE1-212ENST00000529046 PEG10Q86TG7 708 aaKnown RBP5.55□□□□□ -1.52
CSDE1-212ENST00000529046 DNAJB14Q8TBM8 379 aa5.55□□□□□ -1.52
CSDE1-212ENST00000529046 ATRIPQ8WXE1 791 aa5.55□□□□□ -1.52
CSDE1-212ENST00000529046 TFAP2BQ92481 460 aa5.55□□□□□ -1.52
CSDE1-212ENST00000529046 STK33Q9BYT3 514 aa5.55□□□□□ -1.52
CSDE1-212ENST00000529046 WDR12Q9GZL7 423 aaKnown RBP5.55□□□□□ -1.52
CSDE1-212ENST00000529046 KLK15Q9H2R5 256 aa5.55□□□□□ -1.52
CSDE1-212ENST00000529046 CERS4Q9HA82 394 aa5.55□□□□□ -1.52
CSDE1-212ENST00000529046 AS3MTQ9HBK9 375 aa5.55□□□□□ -1.52
CSDE1-212ENST00000529046 GBA2Q9HCG7 927 aaPredicted RBP5.55□□□□□ -1.52
CSDE1-212ENST00000529046 TRIM36Q9NQ86 728 aa5.55□□□□□ -1.52
CSDE1-212ENST00000529046 HEYLQ9NQ87 328 aaPredicted RBP5.55□□□□□ -1.52
CSDE1-212ENST00000529046 GJB4Q9NTQ9 266 aa5.55□□□□□ -1.52
CSDE1-212ENST00000529046 MIS18AQ9NYP9 233 aa5.55□□□□□ -1.52
CSDE1-212ENST00000529046 EHD3Q9NZN3 535 aa5.55□□□□□ -1.52
CSDE1-212ENST00000529046 HACL1Q9UJ83 578 aa5.55□□□□□ -1.52
CSDE1-212ENST00000529046 ITGB1BP2Q9UKP3 347 aa5.55□□□□□ -1.52
CSDE1-212ENST00000529046 HDAC9Q9UKV0 1011 aa5.55□□□□□ -1.52
CSDE1-212ENST00000529046 SNX14Q9Y5W7 946 aa5.55□□□□□ -1.52
CSDE1-212ENST00000529046 CNTNAP1P78357 1384 aa5.55□□□□□ -1.52
CSDE1-212ENST00000529046 UBN2Q6ZU65 1347 aa5.54□□□□□ -1.52
CSDE1-212ENST00000529046 MAPK8IP3Q9UPT6 1336 aa5.54□□□□□ -1.52
CSDE1-212ENST00000529046 HNRNPDLO14979 420 aaKnown RBP5.54□□□□□ -1.52
CSDE1-212ENST00000529046 ERBB2P04626 1255 aa5.54□□□□□ -1.52
CSDE1-212ENST00000529046 CHRM2P08172 466 aa5.54□□□□□ -1.52
CSDE1-212ENST00000529046 ELFN1P0C7U0 828 aa5.54□□□□□ -1.52
CSDE1-212ENST00000529046 ZNF37AP17032 561 aaPredicted RBP5.54□□□□□ -1.52
CSDE1-212ENST00000529046 ADORA2AP29274 412 aa5.54□□□□□ -1.52
CSDE1-212ENST00000529046 UQCRC1P31930 480 aa5.54□□□□□ -1.52
CSDE1-212ENST00000529046 EPHX2P34913 555 aa5.54□□□□□ -1.52
CSDE1-212ENST00000529046 PPM1AP35813 382 aa5.54□□□□□ -1.52
CSDE1-212ENST00000529046 TMPOP42166 694 aaKnown RBP5.54□□□□□ -1.52
CSDE1-212ENST00000529046 FHL3Q13643 280 aa5.54□□□□□ -1.52
CSDE1-212ENST00000529046 AKNAD1Q5T1N1 836 aa5.54□□□□□ -1.52
CSDE1-212ENST00000529046 MZT2AQ6P582 158 aa5.54□□□□□ -1.52
CSDE1-212ENST00000529046 USP50Q70EL3 339 aaPredicted RBP5.54□□□□□ -1.52
CSDE1-212ENST00000529046 IZUMO1Q8IYV9 350 aa5.54□□□□□ -1.52
CSDE1-212ENST00000529046 SPARTQ8N0X7 666 aa5.54□□□□□ -1.52
CSDE1-212ENST00000529046 OSCP1Q8WVF1 389 aa5.54□□□□□ -1.52
CSDE1-212ENST00000529046 TMEM41AQ96HV5 264 aa5.54□□□□□ -1.52
CSDE1-212ENST00000529046 RBM17Q96I25 401 aaKnown RBP5.54□□□□□ -1.52
CSDE1-212ENST00000529046 MPHOSPH6Q99547 160 aaKnown RBP5.54□□□□□ -1.52
CSDE1-212ENST00000529046 TTLL2Q9BWV7 592 aa5.54□□□□□ -1.52
CSDE1-212ENST00000529046 MAGEB5Q9BZ81 275 aa5.54□□□□□ -1.52
CSDE1-212ENST00000529046 TMEM8AQ9HCN3 771 aa5.54□□□□□ -1.52
CSDE1-212ENST00000529046 NECTIN3Q9NQS3 549 aa5.54□□□□□ -1.52
CSDE1-212ENST00000529046 TM7SF3Q9NS93 570 aa5.54□□□□□ -1.52
CSDE1-212ENST00000529046 SERTAD4Q9NUC0 356 aa5.54□□□□□ -1.52
CSDE1-212ENST00000529046 TRMT13Q9NUP7 481 aaKnown RBP5.54□□□□□ -1.52
CSDE1-212ENST00000529046 PGAP2Q9UHJ9 254 aa5.54□□□□□ -1.52
CSDE1-212ENST00000529046 TSPYL4Q9UJ04 414 aa5.54□□□□□ -1.52
CSDE1-212ENST00000529046 MAN2B2Q9Y2E5 1009 aa5.54□□□□□ -1.52
CSDE1-212ENST00000529046 RRP7AQ9Y3A4 280 aaKnown RBP5.54□□□□□ -1.52
CSDE1-212ENST00000529046 ATP6V0A2Q9Y487 856 aa5.54□□□□□ -1.52
CSDE1-212ENST00000529046 LAMB4A4D0S4 1761 aa5.54□□□□□ -1.52
CSDE1-212ENST00000529046 KDM3BQ7LBC6 1761 aa5.54□□□□□ -1.52
CSDE1-212ENST00000529046 PCNTO95613 3336 aa5.54□□□□□ -1.52
CSDE1-212ENST00000529046 CCDC88AQ3V6T2 1871 aa5.54□□□□□ -1.52
CSDE1-212ENST00000529046 CDHR2Q9BYE9 1310 aa5.53□□□□□ -1.52
CSDE1-212ENST00000529046 ZNF541Q9H0D2 1346 aa5.53□□□□□ -1.52
CSDE1-212ENST00000529046 ADAMTSL1Q8N6G6 1762 aa5.53□□□□□ -1.52
CSDE1-212ENST00000529046 A1L4Q6 167 aa5.53□□□□□ -1.52
CSDE1-212ENST00000529046 SRGAP2O75044 1071 aa5.53□□□□□ -1.52
CSDE1-212ENST00000529046 PIAS2O75928 621 aa5.53□□□□□ -1.52
CSDE1-212ENST00000529046 NXPH3O95157 252 aa5.53□□□□□ -1.52
CSDE1-212ENST00000529046 HSPA1AP0DMV8 641 aaKnown RBP5.53□□□□□ -1.52
CSDE1-212ENST00000529046 HSPA1BP0DMV9 641 aaKnown RBP5.53□□□□□ -1.52
CSDE1-212ENST00000529046 JUPP14923 745 aa5.53□□□□□ -1.52
CSDE1-212ENST00000529046 EGR1P18146 543 aa5.53□□□□□ -1.52
CSDE1-212ENST00000529046 ABCB4P21439 1286 aa5.53□□□□□ -1.52
CSDE1-212ENST00000529046 GRIA3P42263 894 aa5.53□□□□□ -1.52
CSDE1-212ENST00000529046 RIPK4P57078 832 aa5.53□□□□□ -1.52
CSDE1-212ENST00000529046 TIRAPP58753 221 aa5.53□□□□□ -1.52
CSDE1-212ENST00000529046 BIRC2Q13490 618 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms