RNA–Protein interactions for RNA: ENST00000528748.5

CDC27-206, Transcript of cell division cycle 27, human

TSL 3

Gene CDC27, Length 859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC27-206	ENST00000528748	DNAJC24	Q6P3W2	148 aa		11.42	□□□□□ -0.58
CDC27-206	ENST00000528748	VIT	Q6UXI7	678 aa		11.42	□□□□□ -0.58
CDC27-206	ENST00000528748	DDX42	Q86XP3	938 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
CDC27-206	ENST00000528748	MIB1	Q86YT6	1006 aa		11.42	□□□□□ -0.58
CDC27-206	ENST00000528748	MFSD6L	Q8IWD5	586 aa		11.42	□□□□□ -0.58
CDC27-206	ENST00000528748	SLC44A3	Q8N4M1	653 aa		11.42	□□□□□ -0.58
CDC27-206	ENST00000528748	EMC1	Q8N766	993 aa		11.42	□□□□□ -0.58
CDC27-206	ENST00000528748	ZSCAN1	Q8NBB4	408 aa		11.42	□□□□□ -0.58
CDC27-206	ENST00000528748	PLPP7	Q8NBV4	271 aa		11.42	□□□□□ -0.58
CDC27-206	ENST00000528748	BPIFB1	Q8TDL5	484 aa		11.42	□□□□□ -0.58
CDC27-206	ENST00000528748	SH3RF2	Q8TEC5	729 aa		11.42	□□□□□ -0.58
CDC27-206	ENST00000528748	RXFP2	Q8WXD0	754 aa		11.42	□□□□□ -0.58
CDC27-206	ENST00000528748	RSAD2	Q8WXG1	361 aa		11.42	□□□□□ -0.58
CDC27-206	ENST00000528748	NPY6R	Q99463	290 aa		11.42	□□□□□ -0.58
CDC27-206	ENST00000528748	PACSIN1	Q9BY11	444 aa		11.42	□□□□□ -0.58
CDC27-206	ENST00000528748	GRIP2	Q9C0E4	1043 aa		11.42	□□□□□ -0.58
CDC27-206	ENST00000528748	SMOC2	Q9H3U7	446 aa		11.42	□□□□□ -0.58
CDC27-206	ENST00000528748	MRPL47	Q9HD33	250 aa	Known RBP	11.42	□□□□□ -0.58
CDC27-206	ENST00000528748	MYO1A	Q9UBC5	1043 aa		11.42	□□□□□ -0.58
CDC27-206	ENST00000528748	RASAL2	Q9UJF2	1139 aa		11.42	□□□□□ -0.58
CDC27-206	ENST00000528748	INTU	Q9ULD6	942 aa		11.42	□□□□□ -0.58
CDC27-206	ENST00000528748	HBS1L	Q9Y450	684 aa	Known RBP	11.42	□□□□□ -0.58
CDC27-206	ENST00000528748	PCDHA13	Q9Y5I0	950 aa		11.42	□□□□□ -0.58
CDC27-206	ENST00000528748	NUMBL	Q9Y6R0	609 aa		11.42	□□□□□ -0.58
CDC27-206	ENST00000528748	E2F8	A0AVK6	867 aa		11.41	□□□□□ -0.58
CDC27-206	ENST00000528748	CDC14C	A4D256	554 aa		11.41	□□□□□ -0.58
CDC27-206	ENST00000528748	TMEM191C	A6NGB0	347 aa		11.41	□□□□□ -0.58
CDC27-206	ENST00000528748	STC2	O76061	302 aa		11.41	□□□□□ -0.58
CDC27-206	ENST00000528748	ENDOD1	O94919	500 aa		11.41	□□□□□ -0.58
CDC27-206	ENST00000528748	F9	P00740	461 aa		11.41	□□□□□ -0.58
CDC27-206	ENST00000528748	PSMC3	P17980	439 aa		11.41	□□□□□ -0.58
CDC27-206	ENST00000528748	GBP1	P32455	592 aa		11.41	□□□□□ -0.58
CDC27-206	ENST00000528748	SPA17	Q15506	151 aa		11.41	□□□□□ -0.58
CDC27-206	ENST00000528748	TRIP4	Q15650	581 aa	Predicted RBP	11.41	□□□□□ -0.58
CDC27-206	ENST00000528748	ZNF77	Q15935	545 aa		11.41	□□□□□ -0.58
CDC27-206	ENST00000528748	CCDC14	Q49A88	953 aa		11.41	□□□□□ -0.58
CDC27-206	ENST00000528748	DCUN1D2	Q6PH85	259 aa		11.41	□□□□□ -0.58
CDC27-206	ENST00000528748	HTR3D	Q70Z44	454 aa		11.41	□□□□□ -0.58
CDC27-206	ENST00000528748	TAC4	Q86UU9	113 aa		11.41	□□□□□ -0.58
CDC27-206	ENST00000528748	KIAA1958	Q8N8K9	716 aa		11.41	□□□□□ -0.58
CDC27-206	ENST00000528748	CCDC112	Q8NEF3	446 aa		11.41	□□□□□ -0.58
CDC27-206	ENST00000528748	RIN3	Q8TB24	985 aa		11.41	□□□□□ -0.58
CDC27-206	ENST00000528748	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	11.41	□□□□□ -0.58
CDC27-206	ENST00000528748	WBP2	Q969T9	261 aa		11.41	□□□□□ -0.58
CDC27-206	ENST00000528748	ARHGEF26	Q96DR7	871 aa		11.41	□□□□□ -0.58
CDC27-206	ENST00000528748	PGAP3	Q96FM1	320 aa	Predicted RBP	11.41	□□□□□ -0.58
CDC27-206	ENST00000528748	CFAP57	Q96MR6	1250 aa		11.41	□□□□□ -0.58
CDC27-206	ENST00000528748	SERPINB11	Q96P15	392 aa		11.41	□□□□□ -0.58
CDC27-206	ENST00000528748	MCEE	Q96PE7	176 aa		11.41	□□□□□ -0.58
CDC27-206	ENST00000528748	KXD1	Q9BQD3	176 aa		11.41	□□□□□ -0.58
CDC27-206	ENST00000528748	TMEM51	Q9NW97	253 aa		11.41	□□□□□ -0.58
CDC27-206	ENST00000528748	CFAP97	Q9P2B7	532 aa		11.41	□□□□□ -0.58
CDC27-206	ENST00000528748	STAP1	Q9ULZ2	295 aa		11.41	□□□□□ -0.58
CDC27-206	ENST00000528748	TLR6	Q9Y2C9	796 aa		11.41	□□□□□ -0.58
CDC27-206	ENST00000528748	SCIN	Q9Y6U3	715 aa		11.41	□□□□□ -0.58
CDC27-206	ENST00000528748	HELZ	P42694	1942 aa	Known RBP	11.41	□□□□□ -0.58
CDC27-206	ENST00000528748	SPTBN5	Q9NRC6	3674 aa	Known RBP	11.4	□□□□□ -0.58
CDC27-206	ENST00000528748		M0QYT0	321 aa		11.4	□□□□□ -0.58
CDC27-206	ENST00000528748	IRAK2	O43187	625 aa		11.4	□□□□□ -0.58
CDC27-206	ENST00000528748	MSI1	O43347	362 aa	Known RBP	11.4	□□□□□ -0.58
CDC27-206	ENST00000528748	GREM1	O60565	184 aa		11.4	□□□□□ -0.58
CDC27-206	ENST00000528748	IGLV3-27	P01718	113 aa		11.4	□□□□□ -0.58
CDC27-206	ENST00000528748	KLKB1	P03952	638 aa		11.4	□□□□□ -0.58
CDC27-206	ENST00000528748	ASGR2	P07307	311 aa		11.4	□□□□□ -0.58
CDC27-206	ENST00000528748	HMBS	P08397	361 aa		11.4	□□□□□ -0.58
CDC27-206	ENST00000528748	TFE3	P19532	575 aa	Predicted RBP	11.4	□□□□□ -0.58
CDC27-206	ENST00000528748	GPD1	P21695	349 aa		11.4	□□□□□ -0.58
CDC27-206	ENST00000528748	SDC4	P31431	198 aa		11.4	□□□□□ -0.58
CDC27-206	ENST00000528748	PTPN9	P43378	593 aa		11.4	□□□□□ -0.58
CDC27-206	ENST00000528748	ZNF143	P52747	638 aa	Predicted RBP	11.4	□□□□□ -0.58
CDC27-206	ENST00000528748	TBX4	P57082	545 aa		11.4	□□□□□ -0.58
CDC27-206	ENST00000528748	KRT83	P78385	493 aa		11.4	□□□□□ -0.58
CDC27-206	ENST00000528748	RING1	Q06587	406 aa		11.4	□□□□□ -0.58
CDC27-206	ENST00000528748	FCHO2	Q0JRZ9	810 aa		11.4	□□□□□ -0.58
CDC27-206	ENST00000528748	BNIPL	Q7Z465	357 aa		11.4	□□□□□ -0.58
CDC27-206	ENST00000528748	GJD3	Q8N144	294 aa		11.4	□□□□□ -0.58
CDC27-206	ENST00000528748	DEPDC1B	Q8WUY9	529 aa		11.4	□□□□□ -0.58
CDC27-206	ENST00000528748	CENPI	Q92674	756 aa	Predicted RBP	11.4	□□□□□ -0.58
CDC27-206	ENST00000528748	PLD4	Q96BZ4	506 aa		11.4	□□□□□ -0.58
CDC27-206	ENST00000528748	SLC39A13	Q96H72	371 aa		11.4	□□□□□ -0.58
CDC27-206	ENST00000528748	FCRL2	Q96LA5	508 aa	Predicted RBP	11.4	□□□□□ -0.58
CDC27-206	ENST00000528748	PPP1R9B	Q96SB3	815 aa		11.4	□□□□□ -0.58
CDC27-206	ENST00000528748	TBCB	Q99426	244 aa		11.4	□□□□□ -0.58
CDC27-206	ENST00000528748	TRMT61B	Q9BVS5	477 aa	Known RBP	11.4	□□□□□ -0.58
CDC27-206	ENST00000528748	DCLK3	Q9C098	648 aa		11.4	□□□□□ -0.58
CDC27-206	ENST00000528748	CD320	Q9NPF0	282 aa		11.4	□□□□□ -0.58
CDC27-206	ENST00000528748	LUC7L	Q9NQ29	371 aa	Known RBP	11.4	□□□□□ -0.58
CDC27-206	ENST00000528748	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	11.4	□□□□□ -0.58	1e-7	■■■□□ 17.7
CDC27-206	ENST00000528748	THG1L	Q9NWX6	298 aa	Known RBP	11.4	□□□□□ -0.58
CDC27-206	ENST00000528748	DDIT4	Q9NX09	232 aa		11.4	□□□□□ -0.58
CDC27-206	ENST00000528748	CALCOCO1	Q9P1Z2	691 aa		11.4	□□□□□ -0.58
CDC27-206	ENST00000528748	REXO2	Q9Y3B8	237 aa	Known RBP	11.4	□□□□□ -0.58
CDC27-206	ENST00000528748	SH3BP1	Q9Y3L3	701 aa		11.4	□□□□□ -0.58
CDC27-206	ENST00000528748	XIRP2	A4UGR9	3374 aa		11.39	□□□□□ -0.59
CDC27-206	ENST00000528748	CHAD	O15335	359 aa		11.39	□□□□□ -0.59
CDC27-206	ENST00000528748	ARHGAP6	O43182	974 aa		11.39	□□□□□ -0.59
CDC27-206	ENST00000528748	IPO7	O95373	1038 aa	Known RBP	11.39	□□□□□ -0.59
CDC27-206	ENST00000528748	IL2RA	P01589	272 aa		11.39	□□□□□ -0.59
CDC27-206	ENST00000528748	IRF1	P10914	325 aa		11.39	□□□□□ -0.59
CDC27-206	ENST00000528748	HARS2	P49590	506 aa	Known RBP	11.39	□□□□□ -0.59

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