RNA–Protein interactions for RNA: ENST00000528498.5

RDX-204, Transcript of radixin, humanhuman

TSL 1 (best) BASIC

Gene RDX, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-204ENST00000528498 DCP1BQ8IZD4 617 aaKnown RBP22.47■■□□□ 1.19
RDX-204ENST00000528498 SELENOSQ9BQE4 189 aa22.47■■□□□ 1.19
RDX-204ENST00000528498 PRDM12Q9H4Q4 367 aa22.47■■□□□ 1.19
RDX-204ENST00000528498 OR12D3Q9UGF7 316 aa22.47■■□□□ 1.19
RDX-204ENST00000528498 CHMP2BQ9UQN3 213 aa22.47■■□□□ 1.19
RDX-204ENST00000528498 MICAL3Q7RTP6 2002 aa22.47■■□□□ 1.19
RDX-204ENST00000528498 CFAP69A5D8W1 941 aa22.46■■□□□ 1.19
RDX-204ENST00000528498 E7EVH7 732 aa22.46■■□□□ 1.19
RDX-204ENST00000528498 FAM107AO95990 144 aa22.46■■□□□ 1.19
RDX-204ENST00000528498 AGTP01019 485 aa22.46■■□□□ 1.19
RDX-204ENST00000528498 TPI1P60174 286 aa22.46■■□□□ 1.19
RDX-204ENST00000528498 AP1B1Q10567 949 aa22.46■■□□□ 1.19
RDX-204ENST00000528498 XRCC4Q13426 336 aa22.46■■□□□ 1.19
RDX-204ENST00000528498 HEATR6Q6AI08 1181 aaKnown RBP22.46■■□□□ 1.19
RDX-204ENST00000528498 PRSS55Q6UWB4 352 aaPredicted RBP22.46■■□□□ 1.19
RDX-204ENST00000528498 MICALCLQ6ZW33 695 aa22.46■■□□□ 1.19
RDX-204ENST00000528498 PACS2Q86VP3 889 aa22.46■■□□□ 1.19
RDX-204ENST00000528498 MICALL1Q8N3F8 863 aa22.46■■□□□ 1.19
RDX-204ENST00000528498 PYROXD1Q8WU10 500 aa22.46■■□□□ 1.19
RDX-204ENST00000528498 DEPDC1BQ8WUY9 529 aa22.46■■□□□ 1.19
RDX-204ENST00000528498 TFB1MQ8WVM0 346 aaKnown RBP22.46■■□□□ 1.19
RDX-204ENST00000528498 SERPINB12Q96P63 405 aa22.46■■□□□ 1.19
RDX-204ENST00000528498 E7ESA3 106 aa22.46■■□□□ 1.19
RDX-204ENST00000528498 VNN2O95498 520 aa22.46■■□□□ 1.19
RDX-204ENST00000528498 IGLV3-25P01717 112 aa22.46■■□□□ 1.19
RDX-204ENST00000528498 CXCL10P02778 98 aa22.46■■□□□ 1.19
RDX-204ENST00000528498 FGFR3P22607 806 aa22.46■■□□□ 1.19
RDX-204ENST00000528498 GRIA1P42261 906 aa22.46■■□□□ 1.19
RDX-204ENST00000528498 BTBD8Q5XKL5 378 aa22.46■■□□□ 1.19
RDX-204ENST00000528498 CCNYQ8ND76 341 aa22.46■■□□□ 1.19
RDX-204ENST00000528498 HTR3CQ8WXA8 447 aa22.46■■□□□ 1.19
RDX-204ENST00000528498 APBB2Q92870 758 aa22.46■■□□□ 1.19
RDX-204ENST00000528498 SIK2Q9H0K1 926 aa22.46■■□□□ 1.19
RDX-204ENST00000528498 POC1B-GALNT4F8VUJ3 575 aa22.45■■□□□ 1.18
RDX-204ENST00000528498 KIAA0754O94854 1291 aa22.45■■□□□ 1.18
RDX-204ENST00000528498 LRIG2O94898 1065 aa22.45■■□□□ 1.18
RDX-204ENST00000528498 LIG3P49916 1009 aa22.45■■□□□ 1.18
RDX-204ENST00000528498 PDIK1LQ8N165 341 aa22.45■■□□□ 1.18
RDX-204ENST00000528498 SCML4Q8N228 414 aa22.45■■□□□ 1.18
RDX-204ENST00000528498 SEZ6LQ9BYH1 1024 aa22.45■■□□□ 1.18
RDX-204ENST00000528498 SEPT10Q9P0V9 454 aa22.45■■□□□ 1.18
RDX-204ENST00000528498 ZMYND8Q9ULU4 1186 aaPredicted RBP22.45■■□□□ 1.18
RDX-204ENST00000528498 ATP11BQ9Y2G3 1177 aa22.45■■□□□ 1.18
RDX-204ENST00000528498 SHROOM3Q8TF72 1996 aa22.45■■□□□ 1.18
RDX-204ENST00000528498 EXOC1LA0A1B0GW35 172 aa22.45■■□□□ 1.18
RDX-204ENST00000528498 ABHD2P08910 425 aa22.45■■□□□ 1.18
RDX-204ENST00000528498 ELK3P41970 407 aa22.45■■□□□ 1.18
RDX-204ENST00000528498 EIF4EBP2Q13542 120 aaPredicted RBP22.45■■□□□ 1.18
RDX-204ENST00000528498 DENND5BQ6ZUT9 1274 aa22.45■■□□□ 1.18
RDX-204ENST00000528498 ARHGEF2Q92974 986 aaKnown RBP22.45■■□□□ 1.18
RDX-204ENST00000528498 P2RY11Q96G91 374 aa22.45■■□□□ 1.18
RDX-204ENST00000528498 TRIM56Q9BRZ2 755 aaKnown RBP22.45■■□□□ 1.18
RDX-204ENST00000528498 PPANQ9NQ55 473 aaKnown RBP22.45■■□□□ 1.18
RDX-204ENST00000528498 EURLQ9NYK6 297 aa22.45■■□□□ 1.18
RDX-204ENST00000528498 KCNK1O00180 336 aa22.44■■□□□ 1.18
RDX-204ENST00000528498 GCATO75600 419 aa22.44■■□□□ 1.18
RDX-204ENST00000528498 F9P00740 461 aa22.44■■□□□ 1.18
RDX-204ENST00000528498 SRGAP2BP0DMP2 458 aa22.44■■□□□ 1.18
RDX-204ENST00000528498 CPB1P15086 417 aa22.44■■□□□ 1.18
RDX-204ENST00000528498 PAFAH1B3Q15102 231 aaKnown RBP22.44■■□□□ 1.18
RDX-204ENST00000528498 ARL13BQ3SXY8 428 aa22.44■■□□□ 1.18
RDX-204ENST00000528498 RNF19BQ6ZMZ0 732 aa22.44■■□□□ 1.18
RDX-204ENST00000528498 PCDHB5Q9Y5E4 795 aa22.44■■□□□ 1.18
RDX-204ENST00000528498 CHADO15335 359 aa22.43■■□□□ 1.18
RDX-204ENST00000528498 ADAM12O43184 909 aa22.43■■□□□ 1.18
RDX-204ENST00000528498 IRAK2O43187 625 aa22.43■■□□□ 1.18
RDX-204ENST00000528498 MMP13P45452 471 aa22.43■■□□□ 1.18
RDX-204ENST00000528498 STAT4Q14765 748 aa22.43■■□□□ 1.18
RDX-204ENST00000528498 NFE2Q16621 373 aaPredicted RBP22.43■■□□□ 1.18
RDX-204ENST00000528498 ZNF280DQ6N043 979 aa22.43■■□□□ 1.18
RDX-204ENST00000528498 CAND1Q86VP6 1230 aaKnown RBP22.43■■□□□ 1.18
RDX-204ENST00000528498 ABCC13Q9NSE7 274 aa22.43■■□□□ 1.18
RDX-204ENST00000528498 RRN3Q9NYV6 651 aa22.43■■□□□ 1.18
RDX-204ENST00000528498 SF3B1O75533 1304 aaKnown RBP eCLIP22.43■■□□□ 1.182e-6■■■■■ 103.4
RDX-204ENST00000528498 TCEA3O75764 348 aa22.43■■□□□ 1.18
RDX-204ENST00000528498 RPL17P18621 184 aaKnown RBP22.43■■□□□ 1.18
RDX-204ENST00000528498 EPHB2P29323 1055 aa22.43■■□□□ 1.18
RDX-204ENST00000528498 PRKD1Q15139 912 aaPredicted RBP22.43■■□□□ 1.18
RDX-204ENST00000528498 ANKRD20A2Q5SQ80 823 aa22.43■■□□□ 1.18
RDX-204ENST00000528498 ANKRD20A1Q5TYW2 823 aa22.43■■□□□ 1.18
RDX-204ENST00000528498 ANKRD20A3Q5VUR7 823 aa22.43■■□□□ 1.18
RDX-204ENST00000528498 C3orf62Q6ZUJ4 267 aa22.43■■□□□ 1.18
RDX-204ENST00000528498 NUP93Q8N1F7 819 aa22.43■■□□□ 1.18
RDX-204ENST00000528498 TTC25Q96NG3 672 aa22.43■■□□□ 1.18
RDX-204ENST00000528498 KLC2Q9H0B6 622 aa22.43■■□□□ 1.18
RDX-204ENST00000528498 GMIPQ9P107 970 aa22.43■■□□□ 1.18
RDX-204ENST00000528498 GMNCA6NCL1 334 aa22.42■■□□□ 1.18
RDX-204ENST00000528498 C5orf60A6NFR6 353 aa22.42■■□□□ 1.18
RDX-204ENST00000528498 RNF103O00237 685 aa22.42■■□□□ 1.18
RDX-204ENST00000528498 CHN1P15882 459 aa22.42■■□□□ 1.18
RDX-204ENST00000528498 TMED2Q15363 201 aa22.42■■□□□ 1.18
RDX-204ENST00000528498 FAM117BQ6P1L5 589 aa22.42■■□□□ 1.18
RDX-204ENST00000528498 CEP128Q6ZU80 1094 aa22.42■■□□□ 1.18
RDX-204ENST00000528498 ZNF534Q76KX8 674 aa22.42■■□□□ 1.18
RDX-204ENST00000528498 OTUD6BQ8N6M0 293 aa22.42■■□□□ 1.18
RDX-204ENST00000528498 PIH1D1Q9NWS0 290 aaKnown RBP22.42■■□□□ 1.18
RDX-204ENST00000528498 AIF1P55008 147 aa22.42■■□□□ 1.18
RDX-204ENST00000528498 WASHC5Q12768 1159 aa22.42■■□□□ 1.18
RDX-204ENST00000528498 FUBP3Q96I24 572 aaKnown RBP eCLIP22.42■■□□□ 1.188e-7■□□□□ 9.5
RDX-204ENST00000528498 CELF6Q96J87 481 aaKnown RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms