RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 USP4Q13107 963 aa7.68□□□□□ -1.18
C11orf54-207ENST00000528288 BLMHQ13867 455 aa7.68□□□□□ -1.18
C11orf54-207ENST00000528288 PDE1CQ14123 709 aaPredicted RBP7.68□□□□□ -1.18
C11orf54-207ENST00000528288 ZNF484Q5JVG2 852 aa7.68□□□□□ -1.18
C11orf54-207ENST00000528288 LGSNQ5TDP6 509 aa7.68□□□□□ -1.18
C11orf54-207ENST00000528288 GSTCDQ8NEC7 633 aa7.68□□□□□ -1.18
C11orf54-207ENST00000528288 OR52K1Q8NGK4 314 aa7.68□□□□□ -1.18
C11orf54-207ENST00000528288 AGAP2Q99490 1192 aa7.68□□□□□ -1.18
C11orf54-207ENST00000528288 TLE6Q9H808 572 aa7.68□□□□□ -1.18
C11orf54-207ENST00000528288 TMEM216Q9P0N5 145 aa7.68□□□□□ -1.18
C11orf54-207ENST00000528288 PCDHA11Q9Y5I1 949 aa7.68□□□□□ -1.18
C11orf54-207ENST00000528288 FAM159BA6NKW6 160 aa7.68□□□□□ -1.18
C11orf54-207ENST00000528288 LRRC74BQ6ZQY2 392 aa7.68□□□□□ -1.18
C11orf54-207ENST00000528288 RIPOR1Q6ZS17 1223 aa7.68□□□□□ -1.18
C11orf54-207ENST00000528288 PID1Q7Z2X4 250 aa7.68□□□□□ -1.18
C11orf54-207ENST00000528288 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.68□□□□□ -1.18
C11orf54-207ENST00000528288 PLD6Q8N2A8 252 aaKnown RBP7.68□□□□□ -1.18
C11orf54-207ENST00000528288 ENDOVQ8N8Q3 282 aaKnown RBP7.68□□□□□ -1.18
C11orf54-207ENST00000528288 RNF169Q8NCN4 708 aa7.68□□□□□ -1.18
C11orf54-207ENST00000528288 ACVR1CQ8NER5 493 aa7.68□□□□□ -1.18
C11orf54-207ENST00000528288 ZNF398Q8TD17 642 aa7.68□□□□□ -1.18
C11orf54-207ENST00000528288 FBXO41Q8TF61 875 aa7.68□□□□□ -1.18
C11orf54-207ENST00000528288 TFB1MQ8WVM0 346 aaKnown RBP7.68□□□□□ -1.18
C11orf54-207ENST00000528288 TMEM40Q8WWA1 233 aa7.68□□□□□ -1.18
C11orf54-207ENST00000528288 P2RY11Q96G91 374 aa7.68□□□□□ -1.18
C11orf54-207ENST00000528288 PRDM12Q9H4Q4 367 aa7.68□□□□□ -1.18
C11orf54-207ENST00000528288 PIDD1Q9HB75 910 aa7.68□□□□□ -1.18
C11orf54-207ENST00000528288 ZFATQ9P243 1243 aa7.68□□□□□ -1.18
C11orf54-207ENST00000528288 CPSF2Q9P2I0 782 aaKnown RBP7.68□□□□□ -1.18
C11orf54-207ENST00000528288 SMPD1P17405 629 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 ATXN3P54252 364 aaPredicted RBP7.67□□□□□ -1.18
C11orf54-207ENST00000528288 IRF9Q00978 393 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 STILQ15468 1287 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 C1orf146Q5VVC0 180 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 C9orf57Q5W0N0 161 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 ATG16L1Q676U5 607 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 PIGZQ86VD9 579 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 RASSF3Q86WH2 238 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 EXOC8Q8IYI6 725 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 PNPLA1Q8N8W4 532 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 PHC3Q8NDX5 983 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 KBTBD7Q8WVZ9 684 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 PYDC1Q8WXC3 89 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 ZNF333Q96JL9 665 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 FCRL3Q96P31 734 aaPredicted RBP7.67□□□□□ -1.18
C11orf54-207ENST00000528288 PANX3Q96QZ0 392 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 ZNF670Q9BS34 389 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 SNX25Q9H3E2 840 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 PIN4Q9Y237 131 aaKnown RBP7.67□□□□□ -1.18
C11orf54-207ENST00000528288 CITO14578 2027 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 NUP205Q92621 2012 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 BPTFQ12830 3046 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 ZNF638Q14966 1978 aaKnown RBP7.67□□□□□ -1.18
C11orf54-207ENST00000528288 MEIS3P2A8K0S8 358 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 SPECC1L-ADORA2AF8WAN1 911 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 M0QYT0 321 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 DYNC1LI2O43237 492 aaPredicted RBP7.67□□□□□ -1.18
C11orf54-207ENST00000528288 ATP6V1C1P21283 382 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 MSX2P35548 267 aaPredicted RBP7.67□□□□□ -1.18
C11orf54-207ENST00000528288 ARL4AP40617 200 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 SLC1A6P48664 564 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 LAMC2Q13753 1193 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 ITGA9Q13797 1035 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 HIC1Q14526 733 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 RNF220Q5VTB9 566 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 PACS1Q6VY07 963 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 KDELC2Q7Z4H8 507 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 OSTM1Q86WC4 334 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 USP33Q8TEY7 942 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 DNAJB3Q8WWF6 145 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 ZFP42Q96MM3 310 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 RHOBTB2Q9BYZ6 727 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 VRTNQ9H8Y1 702 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 PNPLA8Q9NP80 782 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 ANLNQ9NQW6 1124 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.67□□□□□ -1.18
C11orf54-207ENST00000528288 SIRPGQ9P1W8 387 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 STOML1Q9UBI4 398 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 SLC7A8Q9UHI5 535 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 C2CD2Q9Y426 696 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 RPS6KL1Q9Y6S9 549 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 WDR90Q96KV7 1748 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 GOLGA8QA0A0J9YX86 632 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 GOLGA8OA6NCC3 632 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 CAPN14A8MX76 684 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 GOLGA8NF8WBI6 632 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 SPAG6O75602 509 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 TGDSO95455 350 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 GSRP00390 522 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 ZCCHC18P0CG32 403 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 TYK2P29597 1187 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 VHLP40337 213 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 SLC26A2P50443 739 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 MAP3K7CLP57077 242 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 TSNAXIP1Q2TAA8 658 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 MAVSQ7Z434 540 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 DPP9Q86TI2 863 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 SCUBE1Q8IWY4 988 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 ULK2Q8IYT8 1036 aa7.67□□□□□ -1.18
C11orf54-207ENST00000528288 ANKRD13AQ8IZ07 590 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms