RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 PITX1P78337 314 aaPredicted RBP27.36■■□□□ 1.97
TSPAN4-217ENST00000527644 ZC3H12AQ5D1E8 599 aaKnown RBP27.36■■□□□ 1.97
TSPAN4-217ENST00000527644 RNF43Q68DV7 783 aa27.36■■□□□ 1.97
TSPAN4-217ENST00000527644 KBTBD6Q86V97 674 aa27.36■■□□□ 1.97
TSPAN4-217ENST00000527644 C11orf74Q86VG3 221 aa27.36■■□□□ 1.97
TSPAN4-217ENST00000527644 FAM204AQ9H8W3 233 aa27.36■■□□□ 1.97
TSPAN4-217ENST00000527644 ELOVL2Q9NXB9 296 aa27.36■■□□□ 1.97
TSPAN4-217ENST00000527644 BCCIPQ9P287 314 aaKnown RBP eCLIP27.36■■□□□ 1.97
TSPAN4-217ENST00000527644 SLC12A6Q9UHW9 1150 aa27.36■■□□□ 1.97
TSPAN4-217ENST00000527644 NOCTQ9UK39 431 aaKnown RBP27.36■■□□□ 1.97
TSPAN4-217ENST00000527644 A0A1W2PQF6 199 aa27.35■■□□□ 1.97
TSPAN4-217ENST00000527644 TBL1XO60907 577 aa27.35■■□□□ 1.97
TSPAN4-217ENST00000527644 DAB1O75553 588 aa27.35■■□□□ 1.97
TSPAN4-217ENST00000527644 MOCS2O96007 188 aaPredicted RBP27.35■■□□□ 1.97
TSPAN4-217ENST00000527644 SLC2A3P11169 496 aa27.35■■□□□ 1.97
TSPAN4-217ENST00000527644 SGSHP51688 502 aa27.35■■□□□ 1.97
TSPAN4-217ENST00000527644 CDR2Q01850 454 aa27.35■■□□□ 1.97
TSPAN4-217ENST00000527644 ZNF557Q8N988 423 aaPredicted RBP27.35■■□□□ 1.97
TSPAN4-217ENST00000527644 HJURPQ8NCD3 748 aaPredicted RBP27.35■■□□□ 1.97
TSPAN4-217ENST00000527644 MSANTD4Q8NCY6 345 aa27.35■■□□□ 1.97
TSPAN4-217ENST00000527644 OLIG1Q8TAK6 271 aa27.35■■□□□ 1.97
TSPAN4-217ENST00000527644 HMGB4Q8WW32 186 aa27.35■■□□□ 1.97
TSPAN4-217ENST00000527644 BTN2A3PQ96KV6 586 aa27.35■■□□□ 1.97
TSPAN4-217ENST00000527644 DDIT4Q9NX09 232 aa27.35■■□□□ 1.97
TSPAN4-217ENST00000527644 CACNA2D2Q9NY47 1150 aa27.35■■□□□ 1.97
TSPAN4-217ENST00000527644 THAP10Q9P2Z0 257 aaPredicted RBP27.35■■□□□ 1.97
TSPAN4-217ENST00000527644 SPAG17Q6Q759 2223 aa27.35■■□□□ 1.97
TSPAN4-217ENST00000527644 TYW5A2RUC4 315 aaKnown RBP27.34■■□□□ 1.97
TSPAN4-217ENST00000527644 ZBTB24O43167 697 aaPredicted RBP27.34■■□□□ 1.97
TSPAN4-217ENST00000527644 LRP3O75074 770 aa27.34■■□□□ 1.97
TSPAN4-217ENST00000527644 HLA-FP30511 346 aa27.34■■□□□ 1.97
TSPAN4-217ENST00000527644 NOS2P35228 1153 aa27.34■■□□□ 1.97
TSPAN4-217ENST00000527644 SCNN1AP37088 669 aa27.34■■□□□ 1.97
TSPAN4-217ENST00000527644 NOMO3P69849 1222 aa27.34■■□□□ 1.97
TSPAN4-217ENST00000527644 PLK5Q496M5 336 aa27.34■■□□□ 1.97
TSPAN4-217ENST00000527644 MS4A13Q5J8X5 152 aa27.34■■□□□ 1.97
TSPAN4-217ENST00000527644 DDX51Q8N8A6 666 aaKnown RBP eCLIP27.34■■□□□ 1.97
TSPAN4-217ENST00000527644 ATP6V0D2Q8N8Y2 350 aa27.34■■□□□ 1.97
TSPAN4-217ENST00000527644 WFIKKN2Q8TEU8 576 aa27.34■■□□□ 1.97
TSPAN4-217ENST00000527644 NUCKS1Q9H1E3 243 aaKnown RBP27.34■■□□□ 1.97
TSPAN4-217ENST00000527644 RRN3Q9NYV6 651 aa27.34■■□□□ 1.97
TSPAN4-217ENST00000527644 STON1Q9Y6Q2 735 aa27.34■■□□□ 1.97
TSPAN4-217ENST00000527644 DCLK1O15075 740 aa27.33■■□□□ 1.97
TSPAN4-217ENST00000527644 RHOBTB1O94844 696 aa27.33■■□□□ 1.97
TSPAN4-217ENST00000527644 CCR1P32246 355 aa27.33■■□□□ 1.97
TSPAN4-217ENST00000527644 MATKP42679 507 aa27.33■■□□□ 1.97
TSPAN4-217ENST00000527644 KIAA0907Q7Z7F0 614 aaPredicted RBP27.33■■□□□ 1.97
TSPAN4-217ENST00000527644 PGBD3Q8N328 593 aa27.33■■□□□ 1.97
TSPAN4-217ENST00000527644 SLC20A1Q8WUM9 679 aa27.33■■□□□ 1.97
TSPAN4-217ENST00000527644 CPA5Q8WXQ8 436 aa27.33■■□□□ 1.97
TSPAN4-217ENST00000527644 CIPCQ9C0C6 399 aa27.33■■□□□ 1.97
TSPAN4-217ENST00000527644 DUSP15Q9H1R2 295 aaPredicted RBP27.33■■□□□ 1.97
TSPAN4-217ENST00000527644 CD248Q9HCU0 757 aa27.33■■□□□ 1.97
TSPAN4-217ENST00000527644 SYCE3A1L190 88 aa27.32■■□□□ 1.96
TSPAN4-217ENST00000527644 KCNU1A8MYU2 1149 aa27.32■■□□□ 1.96
TSPAN4-217ENST00000527644 ABCB4P21439 1286 aa27.32■■□□□ 1.96
TSPAN4-217ENST00000527644 TGM1P22735 817 aa27.32■■□□□ 1.96
TSPAN4-217ENST00000527644 FMO1Q01740 532 aa27.32■■□□□ 1.96
TSPAN4-217ENST00000527644 SPEM2Q0P670 501 aa27.32■■□□□ 1.96
TSPAN4-217ENST00000527644 MTA1Q13330 715 aa27.32■■□□□ 1.96
TSPAN4-217ENST00000527644 ENPP2Q13822 863 aa27.32■■□□□ 1.96
TSPAN4-217ENST00000527644 BYSLQ13895 437 aaKnown RBP27.32■■□□□ 1.96
TSPAN4-217ENST00000527644 ELF2Q15723 593 aa27.32■■□□□ 1.96
TSPAN4-217ENST00000527644 NAA35Q5VZE5 725 aa27.32■■□□□ 1.96
TSPAN4-217ENST00000527644 TMEM215Q68D42 235 aa27.32■■□□□ 1.96
TSPAN4-217ENST00000527644 XYLT1Q86Y38 959 aa27.32■■□□□ 1.96
TSPAN4-217ENST00000527644 RNF34Q969K3 372 aa27.32■■□□□ 1.96
TSPAN4-217ENST00000527644 PRICKLE1Q96MT3 831 aaPredicted RBP27.32■■□□□ 1.96
TSPAN4-217ENST00000527644 RTN4Q9NQC3 1192 aaKnown RBP27.32■■□□□ 1.96
TSPAN4-217ENST00000527644 ABCB8Q9NUT2 735 aa27.32■■□□□ 1.96
TSPAN4-217ENST00000527644 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP27.32■■□□□ 1.963e-6■■■□□ 18.3
TSPAN4-217ENST00000527644 STIM2Q9P246 746 aa27.32■■□□□ 1.96
TSPAN4-217ENST00000527644 XPO7Q9UIA9 1087 aaKnown RBP27.32■■□□□ 1.96
TSPAN4-217ENST00000527644 GGA2Q9UJY4 613 aa27.32■■□□□ 1.96
TSPAN4-217ENST00000527644 INVSQ9Y283 1065 aa27.32■■□□□ 1.96
TSPAN4-217ENST00000527644 SDK1Q7Z5N4 2213 aa27.32■■□□□ 1.96
TSPAN4-217ENST00000527644 SYNJ2BP-COX16A0A087WUM0 186 aa27.31■■□□□ 1.96
TSPAN4-217ENST00000527644 WASH3PC4AMC7 463 aa27.31■■□□□ 1.96
TSPAN4-217ENST00000527644 CYP1A1P04798 512 aaPredicted RBP27.31■■□□□ 1.96
TSPAN4-217ENST00000527644 PABPC1P11940 636 aaKnown RBP27.31■■□□□ 1.96
TSPAN4-217ENST00000527644 CHRNB2P17787 502 aa27.31■■□□□ 1.96
TSPAN4-217ENST00000527644 GABRG2P18507 467 aa27.31■■□□□ 1.96
TSPAN4-217ENST00000527644 ARID5AQ03989 594 aa27.31■■□□□ 1.96
TSPAN4-217ENST00000527644 IQCB1Q15051 598 aa27.31■■□□□ 1.96
TSPAN4-217ENST00000527644 FILIP1LQ4L180 1135 aa27.31■■□□□ 1.96
TSPAN4-217ENST00000527644 KIAA1211LQ6NV74 962 aa27.31■■□□□ 1.96
TSPAN4-217ENST00000527644 TRIM72Q6ZMU5 477 aa27.31■■□□□ 1.96
TSPAN4-217ENST00000527644 AHI1Q8N157 1196 aa27.31■■□□□ 1.96
TSPAN4-217ENST00000527644 FIBINQ8TAL6 211 aa27.31■■□□□ 1.96
TSPAN4-217ENST00000527644 MYEOVQ96EZ4 313 aa27.31■■□□□ 1.96
TSPAN4-217ENST00000527644 PARD6AQ9NPB6 346 aa27.31■■□□□ 1.96
TSPAN4-217ENST00000527644 COX16Q9P0S2 106 aa27.31■■□□□ 1.96
TSPAN4-217ENST00000527644 USP18Q9UMW8 372 aa27.31■■□□□ 1.96
TSPAN4-217ENST00000527644 SPTBN4Q9H254 2564 aa27.3■■□□□ 1.96
TSPAN4-217ENST00000527644 TEX33O43247 280 aa27.3■■□□□ 1.96
TSPAN4-217ENST00000527644 EPN2O95208 641 aa27.3■■□□□ 1.96
TSPAN4-217ENST00000527644 TACR2P21452 398 aa27.3■■□□□ 1.96
TSPAN4-217ENST00000527644 P2RY2P41231 377 aa27.3■■□□□ 1.96
TSPAN4-217ENST00000527644 IL12RB1P42701 662 aa27.3■■□□□ 1.96
TSPAN4-217ENST00000527644 RNASE9P60153 205 aaKnown RBP27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms