RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 EXTL3O43909 919 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 ACSL4O60488 711 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 RGS9O75916 674 aaPredicted RBP5.98□□□□□ -1.45
CD44-225ENST00000527326 H6PDO95479 791 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 DDX58O95786 925 aaKnown RBP5.98□□□□□ -1.45
CD44-225ENST00000527326 HMGN1P05114 100 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 KRT8P05787 483 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 POLR2MP0CAP2 368 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 TSPY3P0CV98 308 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 TSPY8P0CW00 308 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 EPB42P16452 691 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 DCKP27707 260 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 GSTM2P28161 218 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 NMT1P30419 496 aaKnown RBP5.98□□□□□ -1.45
CD44-225ENST00000527326 SERPINB1P30740 379 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 PRKAR1BP31321 381 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 EVI2BP34910 448 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 PSMC2P35998 433 aaKnown RBP5.98□□□□□ -1.45
CD44-225ENST00000527326 BMPR1AP36894 532 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 NAMPTP43490 491 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 HAAOP46952 286 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 BMXP51813 675 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 RAC1P63000 192 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 AMPD3Q01432 767 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 TSPY1Q01534 308 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 CD300CQ08708 224 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 COASYQ13057 564 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 MRPL28Q13084 256 aaKnown RBP5.98□□□□□ -1.45
CD44-225ENST00000527326 SLC39A6Q13433 755 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 DSC3Q14574 896 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 ACAP2Q15057 778 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 EXOC3L4Q17RC7 722 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 RSPO4Q2I0M5 234 aaPredicted RBP5.98□□□□□ -1.45
CD44-225ENST00000527326 ABCB5Q2M3G0 1257 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 SLC10A5Q5PT55 438 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 PPM1LQ5SGD2 360 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 ZBTB41Q5SVQ8 909 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 ZNF618Q5T7W0 954 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 IQSEC1Q6DN90 963 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 PLEKHA7Q6IQ23 1121 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 PSAPL1Q6NUJ1 521 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 ZCCHC8Q6NZY4 707 aaKnown RBP5.98□□□□□ -1.45
CD44-225ENST00000527326 ZFP1Q6P2D0 407 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.98□□□□□ -1.45
CD44-225ENST00000527326 AMIGO2Q86SJ2 522 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 GLRX5Q86SX6 157 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 NOP9Q86U38 636 aaKnown RBP5.98□□□□□ -1.45
CD44-225ENST00000527326 TMEM151BQ8IW70 566 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 TRIM59Q8IWR1 403 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.98□□□□□ -1.45
CD44-225ENST00000527326 SRRM1Q8IYB3 904 aaKnown RBP5.98□□□□□ -1.45
CD44-225ENST00000527326 DIS3L2Q8IYB7 885 aaKnown RBP5.98□□□□□ -1.45
CD44-225ENST00000527326 CLYBLQ8N0X4 340 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 TTC5Q8N0Z6 440 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 TCAIMQ8N3R3 496 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 AADATQ8N5Z0 425 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 KBTBD3Q8NAB2 608 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 GIMAP8Q8ND71 665 aaPredicted RBP5.98□□□□□ -1.45
CD44-225ENST00000527326 RBM15BQ8NDT2 890 aaKnown RBP5.98□□□□□ -1.45
CD44-225ENST00000527326 S100ZQ8WXG8 99 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 KRT35Q92764 455 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 P2RX5Q93086 422 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 VTI1AQ96AJ9 217 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 FAM149B1Q96BN6 582 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 INTS12Q96CB8 462 aaKnown RBP5.98□□□□□ -1.45
CD44-225ENST00000527326 SCYL1Q96KG9 808 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 CNBD2Q96M20 576 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 RPRD1AQ96P16 312 aaPredicted RBP5.98□□□□□ -1.45
CD44-225ENST00000527326 GCNAQ96QF7 691 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 CRAMP1Q96RY5 1269 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 ZNF347Q96SE7 839 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 SECISBP2Q96T21 854 aaKnown RBP5.98□□□□□ -1.45
CD44-225ENST00000527326 TM9SF2Q99805 663 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 ACAT2Q9BWD1 397 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 ZNF717Q9BY31 904 aaPredicted RBP5.98□□□□□ -1.45
CD44-225ENST00000527326 ZNF341Q9BYN7 854 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 GCOM2Q9BZD3 368 aaPredicted RBP5.98□□□□□ -1.45
CD44-225ENST00000527326 PDGFDQ9GZP0 370 aaPredicted RBP5.98□□□□□ -1.45
CD44-225ENST00000527326 CCDC8Q9H0W5 538 aaPredicted RBP5.98□□□□□ -1.45
CD44-225ENST00000527326 VPS33BQ9H267 617 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 CDC42EP4Q9H3Q1 356 aaKnown RBP5.98□□□□□ -1.45
CD44-225ENST00000527326 MAGEF1Q9HAY2 307 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 MAGEE1Q9HCI5 957 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 HMG20AQ9NP66 347 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 PNPLA3Q9NST1 481 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 SACM1LQ9NTJ5 587 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 GJB4Q9NTQ9 266 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.98□□□□□ -1.45
CD44-225ENST00000527326 GIMAP4Q9NUV9 329 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 PARVAQ9NVD7 372 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 WHRNQ9P202 907 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 KIF17Q9P2E2 1029 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 BCAP29Q9UHQ4 241 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 ADAMTS6Q9UKP5 1117 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 AMFRQ9UKV5 643 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.98□□□□□ -1.45
CD44-225ENST00000527326 PSMD13Q9UNM6 376 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 SLC8A2Q9UPR5 921 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 SORCS3Q9UPU3 1222 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 POLHQ9Y253 713 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms