RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 TRIP13Q15645 432 aaPredicted RBP19.46■□□□□ 0.71
SMPD1-203ENST00000527275 DRICH1Q6PGQ1 229 aaPredicted RBP19.46■□□□□ 0.71
SMPD1-203ENST00000527275 CYP4V2Q6ZWL3 525 aaPredicted RBP19.46■□□□□ 0.71
SMPD1-203ENST00000527275 HSPH1Q92598 858 aa19.46■□□□□ 0.71
SMPD1-203ENST00000527275 PGAP3Q96FM1 320 aaPredicted RBP19.46■□□□□ 0.71
SMPD1-203ENST00000527275 CORO1BQ9BR76 489 aa19.46■□□□□ 0.71
SMPD1-203ENST00000527275 TXLNGYQ9BZA5 131 aa19.46■□□□□ 0.71
SMPD1-203ENST00000527275 FAM129AQ9BZQ8 928 aa19.46■□□□□ 0.71
SMPD1-203ENST00000527275 SMOC2Q9H3U7 446 aa19.46■□□□□ 0.71
SMPD1-203ENST00000527275 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.46■□□□□ 0.71
SMPD1-203ENST00000527275 ADAM21Q9UKJ8 722 aa19.46■□□□□ 0.71
SMPD1-203ENST00000527275 ATP8A1Q9Y2Q0 1164 aa19.46■□□□□ 0.71
SMPD1-203ENST00000527275 MDM4O15151 490 aa19.45■□□□□ 0.7
SMPD1-203ENST00000527275 MSI1O43347 362 aaKnown RBP19.45■□□□□ 0.7
SMPD1-203ENST00000527275 IGLV3-25P01717 112 aa19.45■□□□□ 0.7
SMPD1-203ENST00000527275 F11P03951 625 aa19.45■□□□□ 0.7
SMPD1-203ENST00000527275 HOXA9P31269 272 aa19.45■□□□□ 0.7
SMPD1-203ENST00000527275 LMNB2Q03252 620 aa19.45■□□□□ 0.7
SMPD1-203ENST00000527275 BYSLQ13895 437 aaKnown RBP19.45■□□□□ 0.7
SMPD1-203ENST00000527275 TAZQ16635 292 aa19.45■□□□□ 0.7
SMPD1-203ENST00000527275 C10orf120Q5SQS8 335 aa19.45■□□□□ 0.7
SMPD1-203ENST00000527275 GAREM2Q75VX8 874 aa19.45■□□□□ 0.7
SMPD1-203ENST00000527275 TMC8Q8IU68 726 aa19.45■□□□□ 0.7
SMPD1-203ENST00000527275 PPP2R3CQ969Q6 453 aa19.45■□□□□ 0.7
SMPD1-203ENST00000527275 NSUN3Q9H649 340 aaKnown RBP19.45■□□□□ 0.7
SMPD1-203ENST00000527275 DNPEPQ9ULA0 475 aa19.45■□□□□ 0.7
SMPD1-203ENST00000527275 NEU2Q9Y3R4 380 aa19.45■□□□□ 0.7
SMPD1-203ENST00000527275 CCDC195A0A1B0GUA6 201 aa19.44■□□□□ 0.7
SMPD1-203ENST00000527275 GOLGA8KD6RF30 607 aa19.44■□□□□ 0.7
SMPD1-203ENST00000527275 CD48P09326 243 aa19.44■□□□□ 0.7
SMPD1-203ENST00000527275 ITIH2P19823 946 aa19.44■□□□□ 0.7
SMPD1-203ENST00000527275 GABRR2P28476 465 aa19.44■□□□□ 0.7
SMPD1-203ENST00000527275 EFEMP1Q12805 493 aa19.44■□□□□ 0.7
SMPD1-203ENST00000527275 GRIN2CQ14957 1233 aa19.44■□□□□ 0.7
SMPD1-203ENST00000527275 TCEAL5Q5H9L2 206 aa19.44■□□□□ 0.7
SMPD1-203ENST00000527275 GSTA5Q7RTV2 222 aa19.44■□□□□ 0.7
SMPD1-203ENST00000527275 NCAPGQ9BPX3 1015 aa19.44■□□□□ 0.7
SMPD1-203ENST00000527275 ZMYND15Q9H091 742 aa19.44■□□□□ 0.7
SMPD1-203ENST00000527275 WDR6Q9NNW5 1121 aaKnown RBP19.44■□□□□ 0.7
SMPD1-203ENST00000527275 DRG1Q9Y295 367 aaKnown RBP19.44■□□□□ 0.7
SMPD1-203ENST00000527275 SOX1O00570 391 aaPredicted RBP19.44■□□□□ 0.7
SMPD1-203ENST00000527275 F9P00740 461 aa19.44■□□□□ 0.7
SMPD1-203ENST00000527275 KRT14P02533 472 aa19.44■□□□□ 0.7
SMPD1-203ENST00000527275 HNRNPA1P09651 372 aaKnown RBP eCLIP19.44■□□□□ 0.7
SMPD1-203ENST00000527275 IVDP26440 423 aa19.44■□□□□ 0.7
SMPD1-203ENST00000527275 PPP3CCP48454 512 aa19.44■□□□□ 0.7
SMPD1-203ENST00000527275 EIF4EBP2Q13542 120 aaPredicted RBP19.44■□□□□ 0.7
SMPD1-203ENST00000527275 MSANTD2Q6P1R3 559 aa19.44■□□□□ 0.7
SMPD1-203ENST00000527275 LRIG3Q6UXM1 1119 aa19.44■□□□□ 0.7
SMPD1-203ENST00000527275 CCDC185Q8N715 623 aa19.44■□□□□ 0.7
SMPD1-203ENST00000527275 C12orf76Q8N812 135 aaPredicted RBP19.44■□□□□ 0.7
SMPD1-203ENST00000527275 HAUS1Q96CS2 278 aa19.44■□□□□ 0.7
SMPD1-203ENST00000527275 SNF8Q96H20 258 aa19.44■□□□□ 0.7
SMPD1-203ENST00000527275 CDCA3Q99618 268 aaPredicted RBP19.44■□□□□ 0.7
SMPD1-203ENST00000527275 ASAH2Q9NR71 780 aa19.44■□□□□ 0.7
SMPD1-203ENST00000527275 ZDHHC7Q9NXF8 308 aa19.44■□□□□ 0.7
SMPD1-203ENST00000527275 ZNF148Q9UQR1 794 aa19.44■□□□□ 0.7
SMPD1-203ENST00000527275 C2orf78A6NCI8 922 aa19.43■□□□□ 0.7
SMPD1-203ENST00000527275 IRAK2O43187 625 aa19.43■□□□□ 0.7
SMPD1-203ENST00000527275 CST8O60676 142 aa19.43■□□□□ 0.7
SMPD1-203ENST00000527275 ADCY8P40145 1251 aa19.43■□□□□ 0.7
SMPD1-203ENST00000527275 HYAL1Q12794 435 aa19.43■□□□□ 0.7
SMPD1-203ENST00000527275 PABPC1LQ4VXU2 614 aaKnown RBP19.43■□□□□ 0.7
SMPD1-203ENST00000527275 SPDYCQ5MJ68 293 aa19.43■□□□□ 0.7
SMPD1-203ENST00000527275 HECTD3Q5T447 861 aa19.43■□□□□ 0.7
SMPD1-203ENST00000527275 ELMSAN1Q6PJG2 1045 aa19.43■□□□□ 0.7
SMPD1-203ENST00000527275 MIB1Q86YT6 1006 aa19.43■□□□□ 0.7
SMPD1-203ENST00000527275 CCDC89Q8N998 374 aa19.43■□□□□ 0.7
SMPD1-203ENST00000527275 PRKD2Q9BZL6 878 aa19.43■□□□□ 0.7
SMPD1-203ENST00000527275 ANAPC1Q9H1A4 1944 aa19.43■□□□□ 0.7
SMPD1-203ENST00000527275 DNMT3BQ9UBC3 853 aaKnown RBP19.43■□□□□ 0.7
SMPD1-203ENST00000527275 NRG2O14511 850 aaPredicted RBP19.43■□□□□ 0.7
SMPD1-203ENST00000527275 DYNLT1P63172 113 aa19.43■□□□□ 0.7
SMPD1-203ENST00000527275 BOLA3Q53S33 107 aa19.43■□□□□ 0.7
SMPD1-203ENST00000527275 BBS12Q6ZW61 710 aa19.43■□□□□ 0.7
SMPD1-203ENST00000527275 ARL8AQ96BM9 186 aa19.43■□□□□ 0.7
SMPD1-203ENST00000527275 ZNF707Q96C28 371 aaPredicted RBP19.43■□□□□ 0.7
SMPD1-203ENST00000527275 TMPRSS4Q9NRS4 437 aa19.43■□□□□ 0.7
SMPD1-203ENST00000527275 OLA1Q9NTK5 396 aaKnown RBP19.43■□□□□ 0.7
SMPD1-203ENST00000527275 MARCH2Q9P0N8 246 aa19.43■□□□□ 0.7
SMPD1-203ENST00000527275 NFS1Q9Y697 457 aa19.43■□□□□ 0.7
SMPD1-203ENST00000527275 A0A1W2PRU2 124 aa19.42■□□□□ 0.7
SMPD1-203ENST00000527275 COCHO43405 550 aa19.42■□□□□ 0.7
SMPD1-203ENST00000527275 XYLBO75191 536 aa19.42■□□□□ 0.7
SMPD1-203ENST00000527275 GLP2RO95838 553 aa19.42■□□□□ 0.7
SMPD1-203ENST00000527275 MYL4P12829 197 aa19.42■□□□□ 0.7
SMPD1-203ENST00000527275 GJA1P17302 382 aa19.42■□□□□ 0.7
SMPD1-203ENST00000527275 PTPN2P17706 415 aa19.42■□□□□ 0.7
SMPD1-203ENST00000527275 ATP5C1P36542 298 aaKnown RBP19.42■□□□□ 0.7
SMPD1-203ENST00000527275 CCR2P41597 374 aa19.42■□□□□ 0.7
SMPD1-203ENST00000527275 CXCR3P49682 368 aa19.42■□□□□ 0.7
SMPD1-203ENST00000527275 PMS2P54278 862 aa19.42■□□□□ 0.7
SMPD1-203ENST00000527275 CDH6P55285 790 aa19.42■□□□□ 0.7
SMPD1-203ENST00000527275 TMC5Q6UXY8 1006 aa19.42■□□□□ 0.7
SMPD1-203ENST00000527275 ZNF276Q8N554 614 aa19.42■□□□□ 0.7
SMPD1-203ENST00000527275 SERPINB11Q96P15 392 aa19.42■□□□□ 0.7
SMPD1-203ENST00000527275 CALN1Q9BXU9 219 aa19.42■□□□□ 0.7
SMPD1-203ENST00000527275 MAGEB5Q9BZ81 275 aa19.42■□□□□ 0.7
SMPD1-203ENST00000527275 NACA2Q9H009 215 aa19.42■□□□□ 0.7
SMPD1-203ENST00000527275 RNF38Q9H0F5 515 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms