RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 ARHGEF37A1IGU5 675 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 SYCE3A1L190 88 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 C7orf72A4D263 438 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 EFCAB8A8MWE9 144 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 H0YCG3 227 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 TM4SF5O14894 197 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 RNGTTO60942 597 aaKnown RBP4.69□□□□□ -1.66
CD44-213ENST00000525209 PPP6R2O75170 966 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 LETM1O95202 739 aaPredicted RBP4.69□□□□□ -1.66
CD44-213ENST00000525209 ALPPP05187 535 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 ALPPL2P10696 532 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 PRG2P13727 222 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 PTPN1P18031 435 aaKnown RBP4.69□□□□□ -1.66
CD44-213ENST00000525209 SP100P23497 879 aaPredicted RBP4.69□□□□□ -1.66
CD44-213ENST00000525209 RFC4P35249 363 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 GATA4P43694 442 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 SLC6A9P48067 706 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 KCNJ5P48544 419 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 NRIP1P48552 1158 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 CDK7P50613 346 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 CDH8P55286 799 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 TRA2BP62995 288 aaKnown RBP4.69□□□□□ -1.66
CD44-213ENST00000525209 TDGQ13569 410 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 PKN1Q16512 942 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 INSCQ1MX18 579 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 GALNTL6Q49A17 601 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 ANKRD20A4Q4UJ75 823 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 AMOTQ4VCS5 1084 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 CCDC178Q5BJE1 867 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 ANKRD20A8PQ5CZ79 823 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 ZNF484Q5JVG2 852 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 RTP2Q5QGT7 225 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 ANKRD20A2Q5SQ80 823 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 TRAPPC3LQ5T215 181 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 UTP14CQ5TAP6 766 aaKnown RBP4.69□□□□□ -1.66
CD44-213ENST00000525209 ANKRD20A1Q5TYW2 823 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 ANKRD20A3Q5VUR7 823 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 PRAMEF9Q5VWM5 478 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 MRNIPQ6NTE8 343 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 RINT1Q6NUQ1 792 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 TTI2Q6NXR4 508 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 FAM180AQ6UWF9 173 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 CRELD2Q6UXH1 353 aaPredicted RBP4.69□□□□□ -1.66
CD44-213ENST00000525209 GAREM2Q75VX8 874 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 RSPH3Q86UC2 560 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 FAM83AQ86UY5 434 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 IRF2BP1Q8IU81 584 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 CILP2Q8IUL8 1156 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 RASGRP3Q8IV61 690 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 AGR3Q8TD06 166 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 CCHCR1Q8TD31 782 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 SLC13A3Q8WWT9 602 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 ASB15Q8WXK1 588 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 MRPS27Q92552 414 aaKnown RBP4.69□□□□□ -1.66
CD44-213ENST00000525209 PRCCQ92733 491 aaPredicted RBP4.69□□□□□ -1.66
CD44-213ENST00000525209 CORO2AQ92828 525 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 ALG14Q96F25 216 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 TMX3Q96JJ7 454 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 FAM84AQ96KN4 292 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 TCEANC2Q96MN5 208 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 GBP4Q96PP9 640 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 RUFY1Q96T51 708 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 PIP5K1AQ99755 562 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 HTATIP2Q9BUP3 242 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 NACAP1Q9BZK3 213 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 FAM129AQ9BZQ8 928 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 SLC5A7Q9GZV3 580 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 STMN4Q9H169 189 aaPredicted RBP4.69□□□□□ -1.66
CD44-213ENST00000525209 ASCC2Q9H1I8 757 aaPredicted RBP4.69□□□□□ -1.66
CD44-213ENST00000525209 WNT5BQ9H1J7 359 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 NELFAQ9H3P2 528 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 C19orf44Q9H6X5 657 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 MANSC1Q9H8J5 431 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 MMRN2Q9H8L6 949 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 SCPEP1Q9HB40 452 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 SLC6A20Q9NP91 592 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 POLR3BQ9NW08 1133 aaPredicted RBP4.69□□□□□ -1.66
CD44-213ENST00000525209 ZNF70Q9UC06 446 aaPredicted RBP4.69□□□□□ -1.66
CD44-213ENST00000525209 ANAPC2Q9UJX6 822 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 WASF3Q9UPY6 502 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 CHKBQ9Y259 395 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 KIF13AQ9H1H9 1805 aa4.69□□□□□ -1.66
CD44-213ENST00000525209 KPNA7A9QM74 516 aa4.68□□□□□ -1.66
CD44-213ENST00000525209 TMEM233B4DJY2 109 aa4.68□□□□□ -1.66
CD44-213ENST00000525209 FAM86B1E9PN63 330 aa4.68□□□□□ -1.66
CD44-213ENST00000525209 F2RL2O00254 374 aa4.68□□□□□ -1.66
CD44-213ENST00000525209 PEX12O00623 359 aa4.68□□□□□ -1.66
CD44-213ENST00000525209 ANGPT2O15123 496 aa4.68□□□□□ -1.66
CD44-213ENST00000525209 CD3EAPO15446 510 aaKnown RBP4.68□□□□□ -1.66
CD44-213ENST00000525209 FGF10O15520 208 aaPredicted RBP4.68□□□□□ -1.66
CD44-213ENST00000525209 RNF113AO15541 343 aaKnown RBP4.68□□□□□ -1.66
CD44-213ENST00000525209 NMT2O60551 498 aa4.68□□□□□ -1.66
CD44-213ENST00000525209 LILRB5O75023 590 aa4.68□□□□□ -1.66
CD44-213ENST00000525209 DAB1O75553 588 aa4.68□□□□□ -1.66
CD44-213ENST00000525209 RASSF9O75901 435 aa4.68□□□□□ -1.66
CD44-213ENST00000525209 SIX3O95343 332 aaPredicted RBP4.68□□□□□ -1.66
CD44-213ENST00000525209 PRLP01236 227 aa4.68□□□□□ -1.66
CD44-213ENST00000525209 GLI1P08151 1106 aa4.68□□□□□ -1.66
CD44-213ENST00000525209 ABCB1P08183 1280 aaPredicted RBP4.68□□□□□ -1.66
CD44-213ENST00000525209 GSTM1P09488 218 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms