RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 AKR1B15C9JRZ8 316 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 H0Y626 953 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 NPC1O15118 1278 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 TIMM44O43615 452 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 AKR1B10O60218 316 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 PAGE1O75459 146 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 RNF8O76064 485 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 ALDH1A2O94788 518 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 IPO7O95373 1038 aaKnown RBP5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 APBB3O95704 486 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 IGLV3-25P01717 112 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 ATP5BP06576 529 aaKnown RBP5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 TACR2P21452 398 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 RRM1P23921 792 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 HOXD9P28356 352 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 FLT3P36888 993 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 PTPN9P43378 593 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 SLC6A11P48066 632 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 CXCR3P49682 368 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 STARD3Q14849 445 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 CDO1Q16878 200 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 ZNF528Q3MIS6 628 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 C2orf27AQ580R0 203 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 FAM133BQ5BKY9 247 aaKnown RBP5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 MS4A13Q5J8X5 152 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 EFHC2Q5JST6 749 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 PIK3R6Q5UE93 754 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 FYB2Q5VWT5 728 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 RNF219Q5W0B1 726 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 RAP1GAP2Q684P5 730 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 NAIF1Q69YI7 327 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 RFWD3Q6PCD5 774 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 MAMSTRQ6ZN01 415 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 SYT13Q7L8C5 426 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 STRADAQ7RTN6 431 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 C12orf40Q86WS4 652 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 FAM131BQ86XD5 332 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 CHPFQ8IZ52 775 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 AHI1Q8N157 1196 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 ZNF687Q8N1G0 1237 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 CARNMT1Q8N4J0 409 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 EMC1Q8N766 993 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 ZNF513Q8N8E2 541 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 TSTD1Q8NFU3 115 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 USP33Q8TEY7 942 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 RXFP2Q8WXD0 754 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 ATRIPQ8WXE1 791 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 CTNNBL1Q8WYA6 563 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 PGAP3Q96FM1 320 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 CCDC42Q96M95 316 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 CFAP57Q96MR6 1250 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 RPRD1AQ96P16 312 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 DNAJC7Q99615 494 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 CNPY3Q9BT09 278 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 CIPCQ9C0C6 399 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 TKTL2Q9H0I9 626 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 SIK2Q9H0K1 926 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 RBSNQ9H1K0 784 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 POLMQ9NP87 494 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 PRMT8Q9NR22 394 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 PIGVQ9NUD9 493 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 ABHD10Q9NUJ1 306 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 DLGAP2Q9P1A6 1054 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 BCCIPQ9P287 314 aaKnown RBP eCLIP5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 MYO1AQ9UBC5 1043 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 CNOT8Q9UFF9 292 aaKnown RBP5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 ADAMTS1Q9UHI8 967 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 GGA2Q9UJY4 613 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 TMEM59LQ9UK28 342 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 RAB23Q9ULC3 237 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 PLA2G4CQ9UP65 541 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 SLC27A6Q9Y2P4 619 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 PCDHGA2Q9Y5H1 932 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 CUL9Q8IWT3 2517 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 SPTBN5Q9NRC6 3674 aaKnown RBP5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 COL4A2P08572 1712 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 DOCK6Q96HP0 2047 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 KIF26AQ9ULI4 1882 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 BDP1A6H8Y1 2624 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 TECTAO75443 2155 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 GOLGA6L7A0A1B0GV03 622 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 SSU72P8A0A1W2PR75 194 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 SHISA7A6NL88 538 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 C2CD4BA6NLJ0 364 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 H0Y858 1186 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 K7EQS6 105 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 DDX3XO00571 662 aaKnown RBP eCLIP5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 ATMINO43313 823 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 SYNCRIPO60506 623 aaKnown RBP5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 CLDN11O75508 207 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 LUC7L3O95232 432 aaKnown RBP5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 PAPSS2O95340 614 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 KLF8O95600 359 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 ASLP04424 464 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 SP9P0CG40 484 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 PABPC1P11940 636 aaKnown RBP5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 HOXB2P14652 356 aa5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 POLR2EP19388 210 aaKnown RBP5.58□□□□□ -1.52
HMGB1P40-201ENST00000525121 PSMA2P25787 234 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms