RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 VIPR1P32241 457 aa7.72□□□□□ -1.17
NEDD8-203ENST00000524927 ADD2P35612 726 aa7.72□□□□□ -1.17
NEDD8-203ENST00000524927 NOVP48745 357 aa7.72□□□□□ -1.17
NEDD8-203ENST00000524927 SRSF3P84103 164 aaKnown RBP7.72□□□□□ -1.17
NEDD8-203ENST00000524927 SEMG2Q02383 582 aa7.72□□□□□ -1.17
NEDD8-203ENST00000524927 GHRHRQ02643 423 aa7.72□□□□□ -1.17
NEDD8-203ENST00000524927 PIN1Q13526 163 aaPredicted RBP7.72□□□□□ -1.17
NEDD8-203ENST00000524927 PDCD1Q15116 288 aa7.72□□□□□ -1.17
NEDD8-203ENST00000524927 INAVAQ3KP66 663 aa7.72□□□□□ -1.17
NEDD8-203ENST00000524927 NOMO2Q5JPE7 1267 aa7.72□□□□□ -1.17
NEDD8-203ENST00000524927 TTC38Q5R3I4 469 aa7.72□□□□□ -1.17
NEDD8-203ENST00000524927 CD276Q5ZPR3 534 aa7.72□□□□□ -1.17
NEDD8-203ENST00000524927 GLB1LQ6UWU2 654 aa7.72□□□□□ -1.17
NEDD8-203ENST00000524927 VITQ6UXI7 678 aa7.72□□□□□ -1.17
NEDD8-203ENST00000524927 ESPNLQ6ZVH7 1005 aa7.72□□□□□ -1.17
NEDD8-203ENST00000524927 FBXO15Q8NCQ5 510 aaPredicted RBP7.72□□□□□ -1.17
NEDD8-203ENST00000524927 C1orf162Q8NEQ5 155 aaPredicted RBP7.72□□□□□ -1.17
NEDD8-203ENST00000524927 FGF11Q92914 225 aa7.72□□□□□ -1.17
NEDD8-203ENST00000524927 ACAP3Q96P50 834 aa7.72□□□□□ -1.17
NEDD8-203ENST00000524927 SENP7Q9BQF6 1050 aa7.72□□□□□ -1.17
NEDD8-203ENST00000524927 ANO3Q9BYT9 981 aa7.72□□□□□ -1.17
NEDD8-203ENST00000524927 ZNF552Q9H707 407 aaPredicted RBP7.72□□□□□ -1.17
NEDD8-203ENST00000524927 SLC39A2Q9NP94 309 aa7.72□□□□□ -1.17
NEDD8-203ENST00000524927 TMEM74BQ9NUR3 256 aa7.72□□□□□ -1.17
NEDD8-203ENST00000524927 MRFAP1Q9Y605 127 aa7.72□□□□□ -1.17
NEDD8-203ENST00000524927 FAM149AA5PLN7 773 aa7.71□□□□□ -1.18
NEDD8-203ENST00000524927 CCL16O15467 120 aa7.71□□□□□ -1.18
NEDD8-203ENST00000524927 FIBPO43427 364 aa7.71□□□□□ -1.18
NEDD8-203ENST00000524927 GJB3O75712 270 aa7.71□□□□□ -1.18
NEDD8-203ENST00000524927 STAM2O75886 525 aa7.71□□□□□ -1.18
NEDD8-203ENST00000524927 CFIP05156 583 aa7.71□□□□□ -1.18
NEDD8-203ENST00000524927 SERPINF2P08697 491 aa7.71□□□□□ -1.18
NEDD8-203ENST00000524927 CT47B1P0C2W7 299 aaPredicted RBP7.71□□□□□ -1.18
NEDD8-203ENST00000524927 AOAHP28039 575 aa7.71□□□□□ -1.18
NEDD8-203ENST00000524927 HSD17B4P51659 736 aa7.71□□□□□ -1.18
NEDD8-203ENST00000524927 PLCB4Q15147 1175 aa7.71□□□□□ -1.18
NEDD8-203ENST00000524927 PON2Q15165 354 aa7.71□□□□□ -1.18
NEDD8-203ENST00000524927 PCBP2Q15366 365 aaKnown RBP eCLIP7.71□□□□□ -1.189e-10■□□□□ 8.1
NEDD8-203ENST00000524927 DUOXA1Q1HG43 343 aa7.71□□□□□ -1.18
NEDD8-203ENST00000524927 FAM78AQ5JUQ0 283 aa7.71□□□□□ -1.18
NEDD8-203ENST00000524927 CCDC181Q5TID7 509 aa7.71□□□□□ -1.18
NEDD8-203ENST00000524927 VASNQ6EMK4 673 aa7.71□□□□□ -1.18
NEDD8-203ENST00000524927 MTHFD1LQ6UB35 978 aa7.71□□□□□ -1.18
NEDD8-203ENST00000524927 TAS1R1Q7RTX1 841 aa7.71□□□□□ -1.18
NEDD8-203ENST00000524927 RABEPKQ7Z6M1 372 aa7.71□□□□□ -1.18
NEDD8-203ENST00000524927 MFSD6LQ8IWD5 586 aa7.71□□□□□ -1.18
NEDD8-203ENST00000524927 CHPFQ8IZ52 775 aa7.71□□□□□ -1.18
NEDD8-203ENST00000524927 GIMAP8Q8ND71 665 aaPredicted RBP7.71□□□□□ -1.18
NEDD8-203ENST00000524927 TMEM176AQ96HP8 235 aa7.71□□□□□ -1.18
NEDD8-203ENST00000524927 CCDC136Q96JN2 1154 aa7.71□□□□□ -1.18
NEDD8-203ENST00000524927 C20orf173Q96LM9 149 aa7.71□□□□□ -1.18
NEDD8-203ENST00000524927 INPP4AQ96PE3 977 aaPredicted RBP7.71□□□□□ -1.18
NEDD8-203ENST00000524927 GAD1Q99259 594 aa7.71□□□□□ -1.18
NEDD8-203ENST00000524927 MEIS3Q99687 375 aa7.71□□□□□ -1.18
NEDD8-203ENST00000524927 POFUT1Q9H488 388 aa7.71□□□□□ -1.18
NEDD8-203ENST00000524927 LUC7LQ9NQ29 371 aaKnown RBP7.71□□□□□ -1.18
NEDD8-203ENST00000524927 CHST12Q9NRB3 414 aa7.71□□□□□ -1.18
NEDD8-203ENST00000524927 SIRT5Q9NXA8 310 aa7.71□□□□□ -1.18
NEDD8-203ENST00000524927 DACT1Q9NYF0 836 aa7.71□□□□□ -1.18
NEDD8-203ENST00000524927 DNMT3BQ9UBC3 853 aaKnown RBP7.71□□□□□ -1.18
NEDD8-203ENST00000524927 IP6K2Q9UHH9 426 aa7.71□□□□□ -1.18
NEDD8-203ENST00000524927 ZNF180Q9UJW8 692 aa7.71□□□□□ -1.18
NEDD8-203ENST00000524927 PILRBQ9UKJ0 227 aa7.71□□□□□ -1.18
NEDD8-203ENST00000524927 FAN1Q9Y2M0 1017 aa7.71□□□□□ -1.18
NEDD8-203ENST00000524927 LUC7L2Q9Y383 392 aaKnown RBP7.71□□□□□ -1.18
NEDD8-203ENST00000524927 MRPL11Q9Y3B7 192 aaKnown RBP7.71□□□□□ -1.18
NEDD8-203ENST00000524927 NOTCH4Q99466 2003 aa7.71□□□□□ -1.18
NEDD8-203ENST00000524927 SLC38A8A6NNN8 435 aa7.7□□□□□ -1.18
NEDD8-203ENST00000524927 PLK4O00444 970 aa7.7□□□□□ -1.18
NEDD8-203ENST00000524927 CHADO15335 359 aa7.7□□□□□ -1.18
NEDD8-203ENST00000524927 XPOTO43592 962 aaKnown RBP7.7□□□□□ -1.18
NEDD8-203ENST00000524927 TSPAN6O43657 245 aa7.7□□□□□ -1.18
NEDD8-203ENST00000524927 H2AFYO75367 372 aaKnown RBP7.7□□□□□ -1.18
NEDD8-203ENST00000524927 GNAI3P08754 354 aa7.7□□□□□ -1.18
NEDD8-203ENST00000524927 CLEC2LP0C7M8 214 aa7.7□□□□□ -1.18
NEDD8-203ENST00000524927 NCAM1P13591 858 aa7.7□□□□□ -1.18
NEDD8-203ENST00000524927 KRT10P13645 584 aa7.7□□□□□ -1.18
NEDD8-203ENST00000524927 BCKDHBP21953 392 aa7.7□□□□□ -1.18
NEDD8-203ENST00000524927 MC4RP32245 332 aa7.7□□□□□ -1.18
NEDD8-203ENST00000524927 GPR3P46089 330 aa7.7□□□□□ -1.18
NEDD8-203ENST00000524927 SLC6A3Q01959 620 aa7.7□□□□□ -1.18
NEDD8-203ENST00000524927 SP4Q02446 784 aa7.7□□□□□ -1.18
NEDD8-203ENST00000524927 OS9Q13438 667 aaPredicted RBP7.7□□□□□ -1.18
NEDD8-203ENST00000524927 ACAP2Q15057 778 aa7.7□□□□□ -1.18
NEDD8-203ENST00000524927 UBE3CQ15386 1083 aa7.7□□□□□ -1.18
NEDD8-203ENST00000524927 CR1LQ2VPA4 569 aa7.7□□□□□ -1.18
NEDD8-203ENST00000524927 SPDYCQ5MJ68 293 aa7.7□□□□□ -1.18
NEDD8-203ENST00000524927 ARHGAP40Q5TG30 622 aa7.7□□□□□ -1.18
NEDD8-203ENST00000524927 PRAMEF9Q5VWM5 478 aa7.7□□□□□ -1.18
NEDD8-203ENST00000524927 LPCAT2Q7L5N7 544 aa7.7□□□□□ -1.18
NEDD8-203ENST00000524927 CXorf67Q86X51 503 aaPredicted RBP7.7□□□□□ -1.18
NEDD8-203ENST00000524927 KIAA0319LQ8IZA0 1049 aa7.7□□□□□ -1.18
NEDD8-203ENST00000524927 IL31RAQ8NI17 732 aa7.7□□□□□ -1.18
NEDD8-203ENST00000524927 SEPT1Q8WYJ6 367 aa7.7□□□□□ -1.18
NEDD8-203ENST00000524927 EAF2Q96CJ1 260 aaPredicted RBP7.7□□□□□ -1.18
NEDD8-203ENST00000524927 FOXRED1Q96CU9 486 aaPredicted RBP7.7□□□□□ -1.18
NEDD8-203ENST00000524927 IL17RBQ9NRM6 502 aa7.7□□□□□ -1.18
NEDD8-203ENST00000524927 HCFC1R1Q9NWW0 138 aa7.7□□□□□ -1.18
NEDD8-203ENST00000524927 PLA2G2DQ9UNK4 145 aa7.7□□□□□ -1.18
NEDD8-203ENST00000524927 PDCD11Q14690 1871 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms