RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 KLF10Q13118 480 aa10.55□□□□□ -0.72
SPIDR-225ENST00000524141 SEMA5AQ13591 1074 aa10.55□□□□□ -0.72
SPIDR-225ENST00000524141 ADGRE1Q14246 886 aa10.55□□□□□ -0.72
SPIDR-225ENST00000524141 USP41Q3LFD5 358 aa10.55□□□□□ -0.72
SPIDR-225ENST00000524141 PACS1Q6VY07 963 aa10.55□□□□□ -0.72
SPIDR-225ENST00000524141 SEPT12Q8IYM1 358 aa10.55□□□□□ -0.72
SPIDR-225ENST00000524141 MPP5Q8N3R9 675 aa10.55□□□□□ -0.72
SPIDR-225ENST00000524141 PHTF2Q8N3S3 785 aa10.55□□□□□ -0.72
SPIDR-225ENST00000524141 DLG3Q92796 817 aa10.55□□□□□ -0.72
SPIDR-225ENST00000524141 NAT9Q9BTE0 207 aa10.55□□□□□ -0.72
SPIDR-225ENST00000524141 XPNPEP3Q9NQH7 507 aa10.55□□□□□ -0.72
SPIDR-225ENST00000524141 DNAAF2Q9NVR5 837 aaKnown RBP10.55□□□□□ -0.72
SPIDR-225ENST00000524141 TELO2Q9Y4R8 837 aa10.55□□□□□ -0.72
SPIDR-225ENST00000524141 PCDHB12Q9Y5F1 795 aa10.55□□□□□ -0.72
SPIDR-225ENST00000524141 AP4B1Q9Y6B7 739 aa10.55□□□□□ -0.72
SPIDR-225ENST00000524141 H0YIN7 160 aa10.55□□□□□ -0.72
SPIDR-225ENST00000524141 MDM4O15151 490 aa10.55□□□□□ -0.72
SPIDR-225ENST00000524141 FBXO21O94952 628 aa10.55□□□□□ -0.72
SPIDR-225ENST00000524141 CRTAMO95727 393 aa10.55□□□□□ -0.72
SPIDR-225ENST00000524141 ZFXP17010 805 aaPredicted RBP10.55□□□□□ -0.72
SPIDR-225ENST00000524141 IL4RP24394 825 aa10.55□□□□□ -0.72
SPIDR-225ENST00000524141 HSPA1LP34931 641 aa10.55□□□□□ -0.72
SPIDR-225ENST00000524141 CREB5Q02930 508 aa10.55□□□□□ -0.72
SPIDR-225ENST00000524141 ACO2Q99798 780 aaKnown RBP10.55□□□□□ -0.72
SPIDR-225ENST00000524141 PCDH18Q9HCL0 1135 aa10.55□□□□□ -0.72
SPIDR-225ENST00000524141 TXNDC16Q9P2K2 825 aa10.55□□□□□ -0.72
SPIDR-225ENST00000524141 HSFX1Q9UBD0 423 aa10.55□□□□□ -0.72
SPIDR-225ENST00000524141 MORF4L1Q9UBU8 362 aa10.55□□□□□ -0.72
SPIDR-225ENST00000524141 VPS28Q9UK41 221 aa10.55□□□□□ -0.72
SPIDR-225ENST00000524141 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.54□□□□□ -0.72
SPIDR-225ENST00000524141 SLC22A2O15244 555 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 H2AFYO75367 372 aaKnown RBP10.54□□□□□ -0.72
SPIDR-225ENST00000524141 STK10O94804 968 aaKnown RBP10.54□□□□□ -0.72
SPIDR-225ENST00000524141 METTL18O95568 372 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 MMP10P09238 476 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 FAM58BPP0C7Q3 252 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 GARSP41250 739 aaKnown RBP10.54□□□□□ -0.72
SPIDR-225ENST00000524141 GPD2P43304 727 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 RAP1GAPP47736 663 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 NR2C2P49116 596 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 FLOT2Q14254 428 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 CDO1Q16878 200 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 SH3PXD2AQ5TCZ1 1133 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 CASC4Q6P4E1 433 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 EPGNQ6UW88 154 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 SETD3Q86TU7 594 aaPredicted RBP10.54□□□□□ -0.72
SPIDR-225ENST00000524141 METTL25Q8N6Q8 603 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 PCDH19Q8TAB3 1148 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 TMEM176AQ96HP8 235 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 TRIM56Q9BRZ2 755 aaKnown RBP10.54□□□□□ -0.72
SPIDR-225ENST00000524141 GRIP2Q9C0E4 1043 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 CDH19Q9H159 772 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 UBAP1Q9NZ09 502 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 TMEM114B3SHH9 223 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 DPYSL4O14531 572 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 VDRP11473 427 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 CPA3P15088 417 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 NUMBP49757 651 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 DCTN2Q13561 401 aaKnown RBP10.54□□□□□ -0.72
SPIDR-225ENST00000524141 APOFQ13790 326 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 C15orf59Q2T9L4 293 aaPredicted RBP10.54□□□□□ -0.72
SPIDR-225ENST00000524141 OLFML2BQ68BL8 750 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 BNC2Q6ZN30 1099 aaPredicted RBP10.54□□□□□ -0.72
SPIDR-225ENST00000524141 ZBTB8OSQ8IWT0 167 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 HACE1Q8IYU2 909 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 KYQ8NBH2 561 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 ZFP28Q8NHY6 868 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 CNDP1Q96KN2 507 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 RPAP3Q9H6T3 665 aaPredicted RBP10.54□□□□□ -0.72
SPIDR-225ENST00000524141 COG4Q9H9E3 785 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 NRBP2Q9NSY0 501 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 ZNF219Q9P2Y4 722 aaPredicted RBP10.54□□□□□ -0.72
SPIDR-225ENST00000524141 ZBTB14O43829 449 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 CILPO75339 1184 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 HSPA4LO95757 839 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 KRT19P08727 400 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 SETSIPP0DME0 302 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 P4HA1P13674 534 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 PGAM1P18669 254 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 TYK2P29597 1187 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 NUDT2P50583 147 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 VWA5B1Q5TIE3 1220 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 OR6B2Q6IFH4 312 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 SCYL2Q6P3W7 929 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 TICAM1Q8IUC6 712 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 DNAJC1Q96KC8 554 aaKnown RBP10.54□□□□□ -0.72
SPIDR-225ENST00000524141 CNBD2Q96M20 576 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 HAUS8Q9BT25 410 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 MRPL1Q9BYD6 325 aaKnown RBP10.54□□□□□ -0.72
SPIDR-225ENST00000524141 CYP3A43Q9HB55 503 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 TCF7L2Q9NQB0 619 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 BTBD7Q9P203 1132 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 RIMS3Q9UJD0 308 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 RIPK3Q9Y572 518 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 ANK1P16157 1881 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 PARP14Q460N5 1801 aa10.54□□□□□ -0.72
SPIDR-225ENST00000524141 WDR27A2RRH5 827 aa10.53□□□□□ -0.72
SPIDR-225ENST00000524141 RGSL1A5PLK6 1076 aa10.53□□□□□ -0.72
SPIDR-225ENST00000524141 KPNA7A9QM74 516 aa10.53□□□□□ -0.72
SPIDR-225ENST00000524141 E9PBE3 544 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms