RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 WFIKKN2Q8TEU8 576 aa8.3□□□□□ -1.08
NSMCE2-213ENST00000523824 CNDP2Q96KP4 475 aaKnown RBP8.3□□□□□ -1.08
NSMCE2-213ENST00000523824 TWNKQ96RR1 684 aa8.3□□□□□ -1.08
NSMCE2-213ENST00000523824 ARID3AQ99856 593 aa8.3□□□□□ -1.08
NSMCE2-213ENST00000523824 DUSP16Q9BY84 665 aa8.3□□□□□ -1.08
NSMCE2-213ENST00000523824 IMPG2Q9BZV3 1241 aa8.3□□□□□ -1.08
NSMCE2-213ENST00000523824 BLZF1Q9H2G9 400 aa8.3□□□□□ -1.08
NSMCE2-213ENST00000523824 TMEM245Q9H330 911 aa8.3□□□□□ -1.08
NSMCE2-213ENST00000523824 OCEL1Q9H607 264 aa8.3□□□□□ -1.08
NSMCE2-213ENST00000523824 FBRSQ9HAH7 460 aa8.3□□□□□ -1.08
NSMCE2-213ENST00000523824 UPF2Q9HAU5 1272 aaKnown RBP8.3□□□□□ -1.08
NSMCE2-213ENST00000523824 MARCH2Q9P0N8 246 aa8.3□□□□□ -1.08
NSMCE2-213ENST00000523824 SUN2Q9UH99 717 aa8.3□□□□□ -1.08
NSMCE2-213ENST00000523824 USP3Q9Y6I4 520 aa8.3□□□□□ -1.08
NSMCE2-213ENST00000523824 KNL1Q8NG31 2342 aa8.3□□□□□ -1.08
NSMCE2-213ENST00000523824 MAST4O15021 2626 aa8.3□□□□□ -1.08
NSMCE2-213ENST00000523824 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.29□□□□□ -1.08
NSMCE2-213ENST00000523824 CBX4O00257 560 aa8.29□□□□□ -1.08
NSMCE2-213ENST00000523824 VILLO15195 856 aa8.29□□□□□ -1.08
NSMCE2-213ENST00000523824 SPTLC2O15270 562 aa8.29□□□□□ -1.08
NSMCE2-213ENST00000523824 HLA-DRAP01903 254 aa8.29□□□□□ -1.08
NSMCE2-213ENST00000523824 ATP5BP06576 529 aaKnown RBP8.29□□□□□ -1.08
NSMCE2-213ENST00000523824 CD58P19256 250 aa8.29□□□□□ -1.08
NSMCE2-213ENST00000523824 SYT1P21579 422 aa8.29□□□□□ -1.08
NSMCE2-213ENST00000523824 CASP1P29466 404 aa8.29□□□□□ -1.08
NSMCE2-213ENST00000523824 HLA-FP30511 346 aa8.29□□□□□ -1.08
NSMCE2-213ENST00000523824 YWHAGP61981 247 aaKnown RBP eCLIP8.29□□□□□ -1.08
NSMCE2-213ENST00000523824 EHHADHQ08426 723 aa8.29□□□□□ -1.08
NSMCE2-213ENST00000523824 PDE4CQ08493 712 aa8.29□□□□□ -1.08
NSMCE2-213ENST00000523824 INCA1Q0VD86 236 aa8.29□□□□□ -1.08
NSMCE2-213ENST00000523824 SFSWAPQ12872 951 aaKnown RBP8.29□□□□□ -1.08
NSMCE2-213ENST00000523824 ZACNQ401N2 412 aa8.29□□□□□ -1.08
NSMCE2-213ENST00000523824 PPP1R26Q5T8A7 1209 aaPredicted RBP8.29□□□□□ -1.08
NSMCE2-213ENST00000523824 HES3Q5TGS1 186 aa8.29□□□□□ -1.08
NSMCE2-213ENST00000523824 ERICH6BQ5W0A0 696 aa8.29□□□□□ -1.08
NSMCE2-213ENST00000523824 ZNF776Q68DI1 518 aaPredicted RBP8.29□□□□□ -1.08
NSMCE2-213ENST00000523824 KIAA0895LQ68EN5 471 aa8.29□□□□□ -1.08
NSMCE2-213ENST00000523824 SV2AQ7L0J3 742 aa8.29□□□□□ -1.08
NSMCE2-213ENST00000523824 GPR155Q7Z3F1 870 aa8.29□□□□□ -1.08
NSMCE2-213ENST00000523824 ZNF843Q8N446 348 aa8.29□□□□□ -1.08
NSMCE2-213ENST00000523824 EID2Q8N6I1 236 aa8.29□□□□□ -1.08
NSMCE2-213ENST00000523824 GOLGA1Q92805 767 aa8.29□□□□□ -1.08
NSMCE2-213ENST00000523824 PLD4Q96BZ4 506 aa8.29□□□□□ -1.08
NSMCE2-213ENST00000523824 TMA16Q96EY4 203 aaKnown RBP8.29□□□□□ -1.08
NSMCE2-213ENST00000523824 HEXIM2Q96MH2 286 aaKnown RBP8.29□□□□□ -1.08
NSMCE2-213ENST00000523824 SLC6A18Q96N87 628 aa8.29□□□□□ -1.08
NSMCE2-213ENST00000523824 ELF4Q99607 663 aaPredicted RBP8.29□□□□□ -1.08
NSMCE2-213ENST00000523824 NRSN2Q9GZP1 204 aa8.29□□□□□ -1.08
NSMCE2-213ENST00000523824 CYP3A43Q9HB55 503 aa8.29□□□□□ -1.08
NSMCE2-213ENST00000523824 PRSS16Q9NQE7 514 aa8.29□□□□□ -1.08
NSMCE2-213ENST00000523824 ABCB8Q9NUT2 735 aa8.29□□□□□ -1.08
NSMCE2-213ENST00000523824 CABIN1Q9Y6J0 2220 aa8.29□□□□□ -1.08
NSMCE2-213ENST00000523824 TEX51A0A1B0GUA7 166 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 PVALEFA0A1B0GWK0 134 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 A0A1W2PPC4 97 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 CAPN8A6NHC0 703 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 LRRC72A6NJI9 287 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 J3QKU1 62 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 IKBKBO14920 756 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 POLR2DO15514 142 aaKnown RBP8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 RNASEH1O60930 286 aaKnown RBP8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 PPP6R2O75170 966 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 IGHV4-34P06331 123 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 DLDP09622 509 aaKnown RBP8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 PABPC1P11940 636 aaKnown RBP8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 POLR2EP19388 210 aaKnown RBP8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 HOXD9P28356 352 aaPredicted RBP8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 CD38P28907 300 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 ACTN2P35609 894 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 AFMP43652 599 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 NASPP49321 788 aaPredicted RBP8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 SLC8A3P57103 927 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 ZNF445P59923 1031 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 ST8SIA6P61647 398 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 CFHR1Q03591 330 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 CCDC173Q0VFZ6 552 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 RTP5Q14D33 572 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 TRIP4Q15650 581 aaPredicted RBP8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 ZNF394Q53GI3 561 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 CEP135Q66GS9 1140 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 MBLAC2Q68D91 279 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 USP30Q70CQ3 517 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 SLC9A9Q8IVB4 645 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 FMNL3Q8IVF7 1028 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 FAM217AQ8IXS0 508 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 AHI1Q8N157 1196 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 LINC00301Q8NCQ3 95 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 CCDC150Q8NCX0 1101 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 SNIP1Q8TAD8 396 aaKnown RBP8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 TMC2Q8TDI7 906 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 SAP25Q8TEE9 199 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 RNF139Q8WU17 664 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 FGF11Q92914 225 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 RNF25Q96BH1 459 aaPredicted RBP8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 TMEM176AQ96HP8 235 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 ORAI3Q9BRQ5 295 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 ZSCAN16Q9H4T2 348 aaPredicted RBP8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 MAGEF1Q9HAY2 307 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 GDF3Q9NR23 364 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 AASDHPPTQ9NRN7 309 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms