RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-213	ENST00000523655	FIBP	O43427	364 aa		5.31	□□□□□ -1.56
SREK1-213	ENST00000523655	GNAI2	P04899	355 aa		5.31	□□□□□ -1.56
SREK1-213	ENST00000523655	PRKCG	P05129	697 aa		5.31	□□□□□ -1.56
SREK1-213	ENST00000523655	IFIT1	P09914	478 aa	Known RBP	5.31	□□□□□ -1.56
SREK1-213	ENST00000523655	PIM1	P11309	404 aa	Predicted RBP	5.31	□□□□□ -1.56
SREK1-213	ENST00000523655	MPG	P29372	298 aa		5.31	□□□□□ -1.56
SREK1-213	ENST00000523655	ARFIP2	P53365	341 aa		5.31	□□□□□ -1.56
SREK1-213	ENST00000523655	SOX8	P57073	446 aa		5.31	□□□□□ -1.56
SREK1-213	ENST00000523655	KRTAP10-11	P60412	298 aa		5.31	□□□□□ -1.56
SREK1-213	ENST00000523655	TAF5	Q15542	800 aa		5.31	□□□□□ -1.56
SREK1-213	ENST00000523655	DEFB115	Q30KQ5	88 aa		5.31	□□□□□ -1.56
SREK1-213	ENST00000523655	TREML2	Q5T2D2	321 aa		5.31	□□□□□ -1.56
SREK1-213	ENST00000523655	FAM160B1	Q5W0V3	765 aa		5.31	□□□□□ -1.56
SREK1-213	ENST00000523655	JMJD6	Q6NYC1	403 aa	Predicted RBP	5.31	□□□□□ -1.56
SREK1-213	ENST00000523655	ZNF66	Q6ZN08	573 aa		5.31	□□□□□ -1.56
SREK1-213	ENST00000523655	TMTC1	Q8IUR5	882 aa		5.31	□□□□□ -1.56
SREK1-213	ENST00000523655	TXLNB	Q8N3L3	684 aa		5.31	□□□□□ -1.56
SREK1-213	ENST00000523655	HDAC2	Q92769	488 aa	Known RBP	5.31	□□□□□ -1.56
SREK1-213	ENST00000523655	NMD3	Q96D46	503 aa	Known RBP	5.31	□□□□□ -1.56
SREK1-213	ENST00000523655	REPS1	Q96D71	796 aa		5.31	□□□□□ -1.56
SREK1-213	ENST00000523655	ALG8	Q9BVK2	526 aa		5.31	□□□□□ -1.56
SREK1-213	ENST00000523655	WASH6P	Q9NQA3	447 aa		5.31	□□□□□ -1.56
SREK1-213	ENST00000523655	SMC4	Q9NTJ3	1288 aa		5.31	□□□□□ -1.56
SREK1-213	ENST00000523655	GJB4	Q9NTQ9	266 aa		5.31	□□□□□ -1.56
SREK1-213	ENST00000523655	PIH1D1	Q9NWS0	290 aa	Known RBP	5.31	□□□□□ -1.56
SREK1-213	ENST00000523655	GGA3	Q9NZ52	723 aa		5.31	□□□□□ -1.56
SREK1-213	ENST00000523655	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	5.31	□□□□□ -1.56
SREK1-213	ENST00000523655	LRFN1	Q9P244	771 aa		5.31	□□□□□ -1.56
SREK1-213	ENST00000523655	IFT80	Q9P2H3	777 aa	Predicted RBP	5.31	□□□□□ -1.56
SREK1-213	ENST00000523655	HESX1	Q9UBX0	185 aa		5.31	□□□□□ -1.56
SREK1-213	ENST00000523655	AFF4	Q9UHB7	1163 aa	Known RBP	5.31	□□□□□ -1.56
SREK1-213	ENST00000523655	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	5.31	□□□□□ -1.56
SREK1-213	ENST00000523655	PARP4	Q9UKK3	1724 aa	Known RBP	5.31	□□□□□ -1.56
SREK1-213	ENST00000523655	TARM1	B6A8C7	271 aa		5.3	□□□□□ -1.56
SREK1-213	ENST00000523655		H0YIZ8	118 aa		5.3	□□□□□ -1.56
SREK1-213	ENST00000523655		K7ENM7	598 aa		5.3	□□□□□ -1.56
SREK1-213	ENST00000523655	ELF1	P32519	619 aa		5.3	□□□□□ -1.56
SREK1-213	ENST00000523655	CYP2C18	P33260	490 aa		5.3	□□□□□ -1.56
SREK1-213	ENST00000523655	BMPR2	Q13873	1038 aa		5.3	□□□□□ -1.56
SREK1-213	ENST00000523655	PTK2B	Q14289	1009 aa		5.3	□□□□□ -1.56
SREK1-213	ENST00000523655	SPARCL1	Q14515	664 aa		5.3	□□□□□ -1.56
SREK1-213	ENST00000523655	SRSF7	Q16629	238 aa	Known RBP eCLIP	5.3	□□□□□ -1.56
SREK1-213	ENST00000523655	FBXO47	Q5MNV8	452 aa		5.3	□□□□□ -1.56
SREK1-213	ENST00000523655	ARHGAP40	Q5TG30	622 aa		5.3	□□□□□ -1.56
SREK1-213	ENST00000523655	BEND5	Q7L4P6	421 aa		5.3	□□□□□ -1.56
SREK1-213	ENST00000523655	ZNF551	Q7Z340	670 aa	Predicted RBP	5.3	□□□□□ -1.56
SREK1-213	ENST00000523655	VGLL2	Q8N8G2	317 aa		5.3	□□□□□ -1.56
SREK1-213	ENST00000523655	FANCB	Q8NB91	859 aa		5.3	□□□□□ -1.56
SREK1-213	ENST00000523655	CYP2W1	Q8TAV3	490 aa		5.3	□□□□□ -1.56
SREK1-213	ENST00000523655	KBTBD7	Q8WVZ9	684 aa		5.3	□□□□□ -1.56
SREK1-213	ENST00000523655	ASB12	Q8WXK4	309 aa		5.3	□□□□□ -1.56
SREK1-213	ENST00000523655	MUL1	Q969V5	352 aa		5.3	□□□□□ -1.56
SREK1-213	ENST00000523655	ZBTB10	Q96DT7	871 aa		5.3	□□□□□ -1.56
SREK1-213	ENST00000523655	NAF1	Q96HR8	494 aa	Known RBP	5.3	□□□□□ -1.56
SREK1-213	ENST00000523655	GDF15	Q99988	308 aa		5.3	□□□□□ -1.56
SREK1-213	ENST00000523655	TRIM54	Q9BYV2	358 aa		5.3	□□□□□ -1.56
SREK1-213	ENST00000523655	DPH1	Q9BZG8	443 aa		5.3	□□□□□ -1.56
SREK1-213	ENST00000523655	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	5.3	□□□□□ -1.56
SREK1-213	ENST00000523655	SARS2	Q9NP81	518 aa	Known RBP	5.3	□□□□□ -1.56
SREK1-213	ENST00000523655	UBN1	Q9NPG3	1134 aa		5.3	□□□□□ -1.56
SREK1-213	ENST00000523655	CNNM1	Q9NRU3	951 aa		5.3	□□□□□ -1.56
SREK1-213	ENST00000523655	TM7SF3	Q9NS93	570 aa		5.3	□□□□□ -1.56
SREK1-213	ENST00000523655	TBC1D22B	Q9NU19	505 aa		5.3	□□□□□ -1.56
SREK1-213	ENST00000523655	DLL3	Q9NYJ7	618 aa		5.3	□□□□□ -1.56
SREK1-213	ENST00000523655	STK26	Q9P289	416 aa		5.3	□□□□□ -1.56
SREK1-213	ENST00000523655	MRPS17	Q9Y2R5	130 aa	Known RBP	5.3	□□□□□ -1.56
SREK1-213	ENST00000523655	NRXN1	Q9ULB1	1477 aa		5.3	□□□□□ -1.56
SREK1-213	ENST00000523655	CEP162	Q5TB80	1403 aa		5.3	□□□□□ -1.56
SREK1-213	ENST00000523655		A0A0G2JLW4	131 aa		5.29	□□□□□ -1.56
SREK1-213	ENST00000523655	GLTPD2	A6NH11	291 aa		5.29	□□□□□ -1.56
SREK1-213	ENST00000523655		B4E171	279 aa		5.29	□□□□□ -1.56
SREK1-213	ENST00000523655	GCOM1	H8Y6P7	765 aa	Predicted RBP	5.29	□□□□□ -1.56
SREK1-213	ENST00000523655	IPO5	O00410	1097 aa	Known RBP	5.29	□□□□□ -1.56
SREK1-213	ENST00000523655	CKMT1A	P12532	417 aa		5.29	□□□□□ -1.56
SREK1-213	ENST00000523655	NDUFB7	P17568	137 aa		5.29	□□□□□ -1.56
SREK1-213	ENST00000523655	TSPAN7	P41732	249 aa		5.29	□□□□□ -1.56
SREK1-213	ENST00000523655	GRM1	Q13255	1194 aa		5.29	□□□□□ -1.56
SREK1-213	ENST00000523655	C3orf38	Q5JPI3	329 aa		5.29	□□□□□ -1.56
SREK1-213	ENST00000523655	TANGO2	Q6ICL3	276 aa		5.29	□□□□□ -1.56
SREK1-213	ENST00000523655	NAPRT	Q6XQN6	538 aa		5.29	□□□□□ -1.56
SREK1-213	ENST00000523655	CATSPERG	Q6ZRH7	1159 aa		5.29	□□□□□ -1.56
SREK1-213	ENST00000523655	ESX1	Q8N693	406 aa		5.29	□□□□□ -1.56
SREK1-213	ENST00000523655	BRIX1	Q8TDN6	353 aa	Known RBP	5.29	□□□□□ -1.56
SREK1-213	ENST00000523655	IQCD	Q96DY2	449 aa		5.29	□□□□□ -1.56
SREK1-213	ENST00000523655	EIF2A	Q9BY44	585 aa	Known RBP	5.29	□□□□□ -1.56
SREK1-213	ENST00000523655	VPS45	Q9NRW7	570 aa		5.29	□□□□□ -1.56
SREK1-213	ENST00000523655	SLC13A4	Q9UKG4	626 aa		5.29	□□□□□ -1.56
SREK1-213	ENST00000523655	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	5.29	□□□□□ -1.56
SREK1-213	ENST00000523655	TNRC6C	Q9HCJ0	1690 aa	Known RBP	5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	VIRMA	Q69YN4	1812 aa	Known RBP	5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	TRIM43B	A6NCK2	446 aa		5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	LINC01548	A6NM66	108 aa		5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	CLCA1	A8K7I4	914 aa		5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	TISP43	B9A030	160 aa		5.28	□□□□□ -1.56
SREK1-213	ENST00000523655		B9A039	149 aa		5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	DDX58	O95786	925 aa	Known RBP	5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	POLB	P06746	335 aa		5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	FES	P07332	822 aa		5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	ANXA2	P07355	339 aa	Known RBP	5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	IL6R	P08887	468 aa	Predicted RBP	5.28	□□□□□ -1.56

Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms