RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 LOC100653049A0A140TA62 436 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 PFDN6O15212 129 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 CHADO15335 359 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 KRT34O76011 436 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 ATE1O95260 518 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 ZBTB11O95625 1053 aaPredicted RBP8.62□□□□□ -1.03
CSMD1-213ENST00000523488 PROCP04070 461 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 IDH3AP50213 366 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 MRPS9P82933 396 aaKnown RBP8.62□□□□□ -1.03
CSMD1-213ENST00000523488 ZNF543Q08ER8 600 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 TRIM16LQ309B1 348 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 SUSD4Q5VX71 490 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 INTS5Q6P9B9 1019 aaKnown RBP8.62□□□□□ -1.03
CSMD1-213ENST00000523488 TTC23LQ6PF05 361 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 PAOXQ6QHF9 649 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 GALNT13Q8IUC8 556 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 EFCAB3Q8N7B9 438 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 C12orf43Q96C57 262 aaKnown RBP8.62□□□□□ -1.03
CSMD1-213ENST00000523488 CMTM5Q96DZ9 223 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 PIGSQ96S52 555 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 GCOM2Q9BZD3 368 aaPredicted RBP8.62□□□□□ -1.03
CSMD1-213ENST00000523488 HOXD1Q9GZZ0 328 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 GINM1Q9NU53 330 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 EPS15L1Q9UBC2 864 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 BCAP29Q9UHQ4 241 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 APOBEC2Q9Y235 224 aaKnown RBP8.62□□□□□ -1.03
CSMD1-213ENST00000523488 CPQQ9Y646 472 aa8.62□□□□□ -1.03
CSMD1-213ENST00000523488 USP17L3A6NCW0 530 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 USP17L4A6NCW7 530 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 FAM13AO94988 1023 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 RALAP11233 206 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 LIMK1P53667 647 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 TAS2R40P59535 323 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 KCNA1Q09470 495 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 NIPAL4Q0D2K0 466 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 PPIL2Q13356 520 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 IKBKEQ14164 716 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 SLC36A3Q495N2 470 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 EGFLAMQ63HQ2 1017 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 LMBRD2Q68DH5 695 aaPredicted RBP8.61□□□□□ -1.03
CSMD1-213ENST00000523488 SLC30A10Q6XR72 485 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 FRA10AC1Q70Z53 315 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 BRINP3Q76B58 766 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 USP17L1Q7RTZ2 530 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 CTAGE3PQ8IX95 158 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 NSMCE3Q96MG7 304 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 KLHL25Q9H0H3 589 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 VTA1Q9NP79 307 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 ACP6Q9NPH0 428 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 ATAD3AQ9NVI7 634 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 XPO7Q9UIA9 1087 aaKnown RBP8.61□□□□□ -1.03
CSMD1-213ENST00000523488 TCAF1Q9Y4C2 921 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 PSMD10O75832 226 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 GSSP48637 474 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 UBAP2LQ14157 1087 aaKnown RBP8.61□□□□□ -1.03
CSMD1-213ENST00000523488 BBS9Q3SYG4 887 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 GPR141Q7Z602 305 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 NUDCD3Q8IVD9 361 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 ADGRF2Q8IZF7 708 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 DEFB107AQ8IZN7 70 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 PGAM4Q8N0Y7 254 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 MFSD4AQ8N468 514 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 MCUQ8NE86 351 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 NLRP7Q8WX94 980 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 CCDC138Q96M89 665 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 POPDC2Q9HBU9 364 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 BCS1LQ9Y276 419 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 ZBTB1Q9Y2K1 713 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 IVNS1ABPQ9Y6Y0 642 aa8.61□□□□□ -1.03
CSMD1-213ENST00000523488 MEIS1O00470 390 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 NOP56O00567 594 aaKnown RBP8.6□□□□□ -1.03
CSMD1-213ENST00000523488 KRT75O95678 551 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 NCF2P19878 526 aaPredicted RBP8.6□□□□□ -1.03
CSMD1-213ENST00000523488 M6PRP20645 277 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 GRM5P41594 1212 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 MAMLD1Q13495 774 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 E2F2Q14209 437 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 SELPLGQ14242 412 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 CAVIN4Q5BKX8 364 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 RALGPS1Q5JS13 557 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 CLEC14AQ86T13 490 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 TMCO5AQ8N6Q1 288 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 E2F7Q96AV8 911 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 TMIGD2Q96BF3 282 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 MED30Q96HR3 178 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 RMND5AQ9H871 391 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 MOV10Q9HCE1 1003 aaKnown RBP8.6□□□□□ -1.03
CSMD1-213ENST00000523488 MOCS1Q9NZB8 636 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 PCDHGB1Q9Y5G3 927 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 BRCA1P38398 1863 aaKnown RBP8.6□□□□□ -1.03
CSMD1-213ENST00000523488 KRBA1A5PL33 1030 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 C9IYK1 514 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 SSTR1P30872 391 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 TNK2Q07912 1038 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 IKQ13123 557 aaPredicted RBP8.6□□□□□ -1.03
CSMD1-213ENST00000523488 TFDP1Q14186 410 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 PTK2BQ14289 1009 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 PDK1Q15118 436 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 HIF1AQ16665 826 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 C6orf52Q5T4I8 152 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms