RNA–Protein interactions for RNA: ENST00000523271.1

EXTL3-214, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 2

Gene EXTL3, Length 8,257 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-214ENST00000523271 CDH3P22223 829 aa12.69□□□□□ -0.38
EXTL3-214ENST00000523271 AQP5P55064 265 aa12.69□□□□□ -0.38
EXTL3-214ENST00000523271 DEPDC4Q8N2C3 294 aa12.69□□□□□ -0.38
EXTL3-214ENST00000523271 PIK3R3Q92569 461 aa12.69□□□□□ -0.38
EXTL3-214ENST00000523271 CDK5RAP1Q96SZ6 601 aaKnown RBP12.69□□□□□ -0.38
EXTL3-214ENST00000523271 DGCR6LQ9BY27 220 aa12.69□□□□□ -0.38
EXTL3-214ENST00000523271 ZCCHC2Q9C0B9 1178 aaKnown RBP12.69□□□□□ -0.38
EXTL3-214ENST00000523271 RRN3Q9NYV6 651 aa12.69□□□□□ -0.38
EXTL3-214ENST00000523271 PLOD2O00469 737 aa12.69□□□□□ -0.38
EXTL3-214ENST00000523271 ZNF806P0C7X5 589 aa12.69□□□□□ -0.38
EXTL3-214ENST00000523271 MYBPC1Q00872 1141 aa12.69□□□□□ -0.38
EXTL3-214ENST00000523271 MGAT5BQ3V5L5 792 aa12.69□□□□□ -0.38
EXTL3-214ENST00000523271 TFDP3Q5H9I0 405 aa12.69□□□□□ -0.38
EXTL3-214ENST00000523271 SAMD4BQ5PRF9 694 aaKnown RBP12.69□□□□□ -0.38
EXTL3-214ENST00000523271 DLG3Q92796 817 aa12.69□□□□□ -0.38
EXTL3-214ENST00000523271 SKA1Q96BD8 255 aa12.69□□□□□ -0.38
EXTL3-214ENST00000523271 SNX6Q9UNH7 406 aa12.69□□□□□ -0.38
EXTL3-214ENST00000523271 AGAP1Q9UPQ3 857 aa12.69□□□□□ -0.38
EXTL3-214ENST00000523271 GLP2RO95838 553 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 PRKCBP05771 671 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 GARTP22102 1010 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 INTS11Q5TA45 600 aaKnown RBP12.68□□□□□ -0.38
EXTL3-214ENST00000523271 SLC9A8Q9Y2E8 581 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 IQGAP3Q86VI3 1631 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 KBTBD13C9JR72 458 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 F5H5T6 163 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 CACNB3P54284 484 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 NAB2Q15742 525 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 GALNT18Q6P9A2 607 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 SMIM5Q71RC9 77 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 MAGEC3Q8TD91 643 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 PCDHA10Q9Y5I2 948 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 PZPP20742 1482 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 TIPRLO75663 272 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 RHOBTB3O94955 611 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 IL12AP29459 219 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 CASP5P51878 434 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 SMIM11AP58511 58 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 TUBA3CQ13748 450 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 ZNHIT3Q15649 155 aaPredicted RBP12.68□□□□□ -0.38
EXTL3-214ENST00000523271 POTEHQ6S545 545 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 POC5Q8NA72 575 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 ZNF248Q8NDW4 579 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 SNIP1Q8TAD8 396 aaKnown RBP12.68□□□□□ -0.38
EXTL3-214ENST00000523271 PUS7LQ9H0K6 701 aaKnown RBP12.68□□□□□ -0.38
EXTL3-214ENST00000523271 GSSP48637 474 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 MTA1Q13330 715 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 FNDC5Q8NAU1 212 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 RNF149Q8NC42 400 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 RNF145Q96MT1 663 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 TCF7L2Q9NQB0 619 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 SRP68Q9UHB9 627 aaKnown RBP12.68□□□□□ -0.38
EXTL3-214ENST00000523271 MRPS7Q9Y2R9 242 aaKnown RBP12.68□□□□□ -0.38
EXTL3-214ENST00000523271 GRIP1Q9Y3R0 1128 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 GAS2O43903 313 aaKnown RBP12.68□□□□□ -0.38
EXTL3-214ENST00000523271 GHRP10912 638 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 RGS7P49802 495 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 ARFIP1P53367 373 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 PDCD4Q53EL6 469 aaKnown RBP12.68□□□□□ -0.38
EXTL3-214ENST00000523271 CHRDL2Q6WN34 429 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 RASGRP2Q7LDG7 609 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 STK32CQ86UX6 486 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 RHOBTB2Q9BYZ6 727 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 TMEM168Q9H0V1 697 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 TMEM216Q9P0N5 145 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 USP21Q9UK80 565 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 ITIH6Q6UXX5 1313 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 USP17L8P0C7I0 530 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 NFKB1P19838 968 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 DYNLL1P63167 89 aaKnown RBP12.68□□□□□ -0.38
EXTL3-214ENST00000523271 SMU1Q2TAY7 513 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 BROXQ5VW32 411 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 MCOLN3Q8TDD5 553 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 ACOT12Q8WYK0 555 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 ASB2Q96Q27 587 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 LRRC40Q9H9A6 602 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 CDH9Q9ULB4 789 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 TMCO1Q9UM00 188 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 SSR3Q9UNL2 185 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 PCDHB2Q9Y5E7 798 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 NEO1Q92859 1461 aa12.68□□□□□ -0.38
EXTL3-214ENST00000523271 PNPLA4P41247 253 aa12.67□□□□□ -0.38
EXTL3-214ENST00000523271 SLC34A1Q06495 639 aa12.67□□□□□ -0.38
EXTL3-214ENST00000523271 CCNG2Q16589 344 aa12.67□□□□□ -0.38
EXTL3-214ENST00000523271 APOBEC3FQ8IUX4 373 aaKnown RBP12.67□□□□□ -0.38
EXTL3-214ENST00000523271 MCCC1Q96RQ3 725 aaPredicted RBP12.67□□□□□ -0.38
EXTL3-214ENST00000523271 NAGPAQ9UK23 515 aa12.67□□□□□ -0.38
EXTL3-214ENST00000523271 FLT1P17948 1338 aa12.67□□□□□ -0.38
EXTL3-214ENST00000523271 LSM1O15116 133 aaKnown RBP12.67□□□□□ -0.38
EXTL3-214ENST00000523271 SLC2A4P14672 509 aa12.67□□□□□ -0.38
EXTL3-214ENST00000523271 STARD3Q14849 445 aa12.67□□□□□ -0.38
EXTL3-214ENST00000523271 ZNF615Q8N8J6 731 aa12.67□□□□□ -0.38
EXTL3-214ENST00000523271 REXO5Q96IC2 774 aaKnown RBP12.67□□□□□ -0.38
EXTL3-214ENST00000523271 GGA3Q9NZ52 723 aa12.67□□□□□ -0.38
EXTL3-214ENST00000523271 PLCL2Q9UPR0 1127 aa12.67□□□□□ -0.38
EXTL3-214ENST00000523271 MAGEB16A2A368 324 aa12.67□□□□□ -0.38
EXTL3-214ENST00000523271 CST8O60676 142 aa12.67□□□□□ -0.38
EXTL3-214ENST00000523271 RBP3P10745 1247 aa12.67□□□□□ -0.38
EXTL3-214ENST00000523271 ODC1P11926 461 aa12.67□□□□□ -0.38
EXTL3-214ENST00000523271 FMO5P49326 533 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms