RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 MEI1Q5TIA1 1274 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 KAZNQ674X7 775 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 RFWD3Q6PCD5 774 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 STRADAQ7RTN6 431 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 SLFN11Q7Z7L1 901 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 NPAS3Q8IXF0 933 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 NIPA2Q8N8Q9 360 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 SMRP1Q8NCR6 262 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 RAPGEF5Q92565 580 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 HEMGNQ9BXL5 484 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 UBE2ZQ9H832 354 aaPredicted RBP12.83□□□□□ -0.36
PABPC1-219ENST00000522387 SNX12Q9UMY4 172 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 USP15Q9Y4E8 981 aaPredicted RBP12.83□□□□□ -0.36
PABPC1-219ENST00000522387 DENND4CQ5VZ89 1909 aa12.83□□□□□ -0.36
PABPC1-219ENST00000522387 CLUHO75153 1309 aa12.82□□□□□ -0.36
PABPC1-219ENST00000522387 LRRD1A4D1F6 860 aa12.82□□□□□ -0.36
PABPC1-219ENST00000522387 ZNF197O14709 1029 aa12.82□□□□□ -0.36
PABPC1-219ENST00000522387 STC2O76061 302 aa12.82□□□□□ -0.36
PABPC1-219ENST00000522387 MAP3K6O95382 1288 aa12.82□□□□□ -0.36
PABPC1-219ENST00000522387 IGLV3-25P01717 112 aa12.82□□□□□ -0.36
PABPC1-219ENST00000522387 CORO1AP31146 461 aaKnown RBP12.82□□□□□ -0.36
PABPC1-219ENST00000522387 PPP3CCP48454 512 aa12.82□□□□□ -0.36
PABPC1-219ENST00000522387 HADHQ16836 314 aaKnown RBP12.82□□□□□ -0.36
PABPC1-219ENST00000522387 DCAF12L1Q5VU92 463 aa12.82□□□□□ -0.36
PABPC1-219ENST00000522387 RTL10Q7L3V2 364 aa12.82□□□□□ -0.36
PABPC1-219ENST00000522387 ANKS1BQ7Z6G8 1248 aa12.82□□□□□ -0.36
PABPC1-219ENST00000522387 CREG2Q8IUH2 290 aa12.82□□□□□ -0.36
PABPC1-219ENST00000522387 CCDC33Q8N5R6 958 aa12.82□□□□□ -0.36
PABPC1-219ENST00000522387 KCTD6Q8NC69 237 aa12.82□□□□□ -0.36
PABPC1-219ENST00000522387 USP13Q92995 863 aaPredicted RBP12.82□□□□□ -0.36
PABPC1-219ENST00000522387 ZFRQ96KR1 1074 aaKnown RBP12.82□□□□□ -0.36
PABPC1-219ENST00000522387 GDAP1L1Q96MZ0 367 aa12.82□□□□□ -0.36
PABPC1-219ENST00000522387 OSBPL9Q96SU4 736 aa12.82□□□□□ -0.36
PABPC1-219ENST00000522387 TRIM62Q9BVG3 475 aa12.82□□□□□ -0.36
PABPC1-219ENST00000522387 OLA1Q9NTK5 396 aaKnown RBP12.82□□□□□ -0.36
PABPC1-219ENST00000522387 CFAP97Q9P2B7 532 aa12.82□□□□□ -0.36
PABPC1-219ENST00000522387 AP4E1Q9UPM8 1137 aa12.82□□□□□ -0.36
PABPC1-219ENST00000522387 TLR6Q9Y2C9 796 aa12.82□□□□□ -0.36
PABPC1-219ENST00000522387 PAGE1O75459 146 aa12.82□□□□□ -0.36
PABPC1-219ENST00000522387 C1RP00736 705 aa12.82□□□□□ -0.36
PABPC1-219ENST00000522387 SLC1A1P43005 524 aa12.82□□□□□ -0.36
PABPC1-219ENST00000522387 CDH6P55285 790 aa12.82□□□□□ -0.36
PABPC1-219ENST00000522387 ITIH3Q06033 890 aa12.82□□□□□ -0.36
PABPC1-219ENST00000522387 SLC20A2Q08357 652 aa12.82□□□□□ -0.36
PABPC1-219ENST00000522387 ERMARDQ5T6L9 678 aa12.82□□□□□ -0.36
PABPC1-219ENST00000522387 RHOT1Q8IXI2 618 aa12.82□□□□□ -0.36
PABPC1-219ENST00000522387 SH3RF2Q8TEC5 729 aa12.82□□□□□ -0.36
PABPC1-219ENST00000522387 CD101Q93033 1021 aa12.82□□□□□ -0.36
PABPC1-219ENST00000522387 ZFYVE19Q96K21 471 aa12.82□□□□□ -0.36
PABPC1-219ENST00000522387 FCRL2Q96LA5 508 aaPredicted RBP12.82□□□□□ -0.36
PABPC1-219ENST00000522387 MYADMQ96S97 322 aa12.82□□□□□ -0.36
PABPC1-219ENST00000522387 TASP1Q9H6P5 420 aa12.82□□□□□ -0.36
PABPC1-219ENST00000522387 TDP1Q9NUW8 608 aa12.82□□□□□ -0.36
PABPC1-219ENST00000522387 VANGL2Q9ULK5 521 aa12.82□□□□□ -0.36
PABPC1-219ENST00000522387 TSPAN3O60637 253 aa12.81□□□□□ -0.36
PABPC1-219ENST00000522387 KRT1P04264 644 aa12.81□□□□□ -0.36
PABPC1-219ENST00000522387 PYGMP11217 842 aa12.81□□□□□ -0.36
PABPC1-219ENST00000522387 KRT10P13645 584 aa12.81□□□□□ -0.36
PABPC1-219ENST00000522387 ADRA1BP35368 520 aa12.81□□□□□ -0.36
PABPC1-219ENST00000522387 HARS2P49590 506 aaKnown RBP12.81□□□□□ -0.36
PABPC1-219ENST00000522387 CXCR3P49682 368 aa12.81□□□□□ -0.36
PABPC1-219ENST00000522387 DYNLT1P63172 113 aa12.81□□□□□ -0.36
PABPC1-219ENST00000522387 FAM78AQ5JUQ0 283 aa12.81□□□□□ -0.36
PABPC1-219ENST00000522387 RAP1GAP2Q684P5 730 aa12.81□□□□□ -0.36
PABPC1-219ENST00000522387 MSANTD2Q6P1R3 559 aa12.81□□□□□ -0.36
PABPC1-219ENST00000522387 BNIPLQ7Z465 357 aa12.81□□□□□ -0.36
PABPC1-219ENST00000522387 TADA2BQ86TJ2 420 aa12.81□□□□□ -0.36
PABPC1-219ENST00000522387 GSPT2Q8IYD1 628 aaKnown RBP12.81□□□□□ -0.36
PABPC1-219ENST00000522387 CFAP52Q8N1V2 620 aa12.81□□□□□ -0.36
PABPC1-219ENST00000522387 CMASQ8NFW8 434 aaPredicted RBP12.81□□□□□ -0.36
PABPC1-219ENST00000522387 ADAMTS19Q8TE59 1207 aa12.81□□□□□ -0.36
PABPC1-219ENST00000522387 HLA-CQ95604 372 aa12.81□□□□□ -0.36
PABPC1-219ENST00000522387 MYEOVQ96EZ4 313 aa12.81□□□□□ -0.36
PABPC1-219ENST00000522387 HES6Q96HZ4 224 aa12.81□□□□□ -0.36
PABPC1-219ENST00000522387 LRRC3BQ96PB8 259 aa12.81□□□□□ -0.36
PABPC1-219ENST00000522387 FAM118BQ9BPY3 351 aa12.81□□□□□ -0.36
PABPC1-219ENST00000522387 KLF16Q9BXK1 252 aaPredicted RBP12.81□□□□□ -0.36
PABPC1-219ENST00000522387 PLK2Q9NYY3 685 aa12.81□□□□□ -0.36
PABPC1-219ENST00000522387 OR12D3Q9UGF7 316 aa12.81□□□□□ -0.36
PABPC1-219ENST00000522387 LCMT1Q9UIC8 334 aa12.81□□□□□ -0.36
PABPC1-219ENST00000522387 CD207Q9UJ71 328 aa12.81□□□□□ -0.36
PABPC1-219ENST00000522387 DOCK8Q8NF50 2099 aa12.81□□□□□ -0.36
PABPC1-219ENST00000522387 MYOFQ9NZM1 2061 aa12.81□□□□□ -0.36
PABPC1-219ENST00000522387 LEFTY2O00292 366 aa12.8□□□□□ -0.36
PABPC1-219ENST00000522387 DDX3YO15523 660 aaKnown RBP12.8□□□□□ -0.36
PABPC1-219ENST00000522387 F9P00740 461 aa12.8□□□□□ -0.36
PABPC1-219ENST00000522387 APOEP02649 317 aa12.8□□□□□ -0.36
PABPC1-219ENST00000522387 GOT1P17174 413 aa12.8□□□□□ -0.36
PABPC1-219ENST00000522387 PCK1P35558 622 aa12.8□□□□□ -0.36
PABPC1-219ENST00000522387 COG7P83436 770 aa12.8□□□□□ -0.36
PABPC1-219ENST00000522387 EIF4EBP2Q13542 120 aaPredicted RBP12.8□□□□□ -0.36
PABPC1-219ENST00000522387 TRIP4Q15650 581 aaPredicted RBP12.8□□□□□ -0.36
PABPC1-219ENST00000522387 PIK3R6Q5UE93 754 aa12.8□□□□□ -0.36
PABPC1-219ENST00000522387 RWDD4Q6NW29 188 aaKnown RBP12.8□□□□□ -0.36
PABPC1-219ENST00000522387 TPGS1Q6ZTW0 290 aa12.8□□□□□ -0.36
PABPC1-219ENST00000522387 CIR1Q86X95 450 aaPredicted RBP12.8□□□□□ -0.36
PABPC1-219ENST00000522387 LRRN4Q8WUT4 740 aa12.8□□□□□ -0.36
PABPC1-219ENST00000522387 RPGRIP1Q96KN7 1286 aa12.8□□□□□ -0.36
PABPC1-219ENST00000522387 MED4Q9NPJ6 270 aa12.8□□□□□ -0.36
PABPC1-219ENST00000522387 MPP6Q9NZW5 540 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms