RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 WSCD1Q658N2 575 aa16.64■□□□□ 0.25
PCDHA3-201ENST00000522353 USP45Q70EL2 814 aa16.64■□□□□ 0.25
PCDHA3-201ENST00000522353 KLRG1Q96E93 195 aa16.64■□□□□ 0.25
PCDHA3-201ENST00000522353 THAP11Q96EK4 314 aa16.64■□□□□ 0.25
PCDHA3-201ENST00000522353 AHCYL2Q96HN2 611 aaKnown RBP16.64■□□□□ 0.25
PCDHA3-201ENST00000522353 PAWRQ96IZ0 340 aaKnown RBP16.64■□□□□ 0.25
PCDHA3-201ENST00000522353 POLR1EQ9GZS1 481 aaKnown RBP16.64■□□□□ 0.25
PCDHA3-201ENST00000522353 TKTL2Q9H0I9 626 aa16.64■□□□□ 0.25
PCDHA3-201ENST00000522353 RAD18Q9NS91 495 aa16.64■□□□□ 0.25
PCDHA3-201ENST00000522353 SCN3BQ9NY72 215 aa16.64■□□□□ 0.25
PCDHA3-201ENST00000522353 TAS2R13Q9NYV9 303 aa16.64■□□□□ 0.25
PCDHA3-201ENST00000522353 TFR2Q9UP52 801 aa16.64■□□□□ 0.25
PCDHA3-201ENST00000522353 RAD51BO15315 384 aa16.64■□□□□ 0.25
PCDHA3-201ENST00000522353 FGF10O15520 208 aaPredicted RBP16.64■□□□□ 0.25
PCDHA3-201ENST00000522353 PSMD10O75832 226 aa16.64■□□□□ 0.25
PCDHA3-201ENST00000522353 TCN1P20061 433 aaPredicted RBP16.64■□□□□ 0.25
PCDHA3-201ENST00000522353 GLRA2P23416 452 aa16.64■□□□□ 0.25
PCDHA3-201ENST00000522353 CYP51A1Q16850 503 aa16.64■□□□□ 0.25
PCDHA3-201ENST00000522353 MAGEB10Q96LZ2 347 aaPredicted RBP16.64■□□□□ 0.25
PCDHA3-201ENST00000522353 LRRC4BQ9NT99 713 aa16.64■□□□□ 0.25
PCDHA3-201ENST00000522353 RPS6KB2Q9UBS0 482 aa16.64■□□□□ 0.25
PCDHA3-201ENST00000522353 DNMT3LQ9UJW3 386 aa16.64■□□□□ 0.25
PCDHA3-201ENST00000522353 CAPN6Q9Y6Q1 641 aa16.64■□□□□ 0.25
PCDHA3-201ENST00000522353 DGKIO75912 1065 aa16.64■□□□□ 0.25
PCDHA3-201ENST00000522353 SLC12A3P55017 1021 aa16.64■□□□□ 0.25
PCDHA3-201ENST00000522353 CSTF3Q12996 717 aaKnown RBP16.64■□□□□ 0.25
PCDHA3-201ENST00000522353 SETMARQ53H47 684 aaPredicted RBP16.64■□□□□ 0.25
PCDHA3-201ENST00000522353 WLSQ5T9L3 541 aa16.64■□□□□ 0.25
PCDHA3-201ENST00000522353 WNT8BQ93098 351 aa16.64■□□□□ 0.25
PCDHA3-201ENST00000522353 SERAC1Q96JX3 654 aa16.64■□□□□ 0.25
PCDHA3-201ENST00000522353 DEFB118Q96PH6 123 aa16.64■□□□□ 0.25
PCDHA3-201ENST00000522353 SLC4A9Q96Q91 983 aa16.64■□□□□ 0.25
PCDHA3-201ENST00000522353 PAFAH2Q99487 392 aa16.64■□□□□ 0.25
PCDHA3-201ENST00000522353 RAB23Q9ULC3 237 aa16.64■□□□□ 0.25
PCDHA3-201ENST00000522353 TNNI3P19429 210 aa16.63■□□□□ 0.25
PCDHA3-201ENST00000522353 SOX11P35716 441 aa16.63■□□□□ 0.25
PCDHA3-201ENST00000522353 CCNG1P51959 295 aa16.63■□□□□ 0.25
PCDHA3-201ENST00000522353 WDR93Q6P2C0 686 aa16.63■□□□□ 0.25
PCDHA3-201ENST00000522353 BTNL9Q6UXG8 535 aa16.63■□□□□ 0.25
PCDHA3-201ENST00000522353 CYP4F12Q9HCS2 524 aa16.63■□□□□ 0.25
PCDHA3-201ENST00000522353 SNTNA6NMZ2 147 aa16.63■□□□□ 0.25
PCDHA3-201ENST00000522353 CCDC130P13994 396 aa16.63■□□□□ 0.25
PCDHA3-201ENST00000522353 AMPD1P23109 780 aa16.63■□□□□ 0.25
PCDHA3-201ENST00000522353 MAPK9P45984 424 aa16.63■□□□□ 0.25
PCDHA3-201ENST00000522353 DNAJC3Q13217 504 aa16.63■□□□□ 0.25
PCDHA3-201ENST00000522353 SEL1L3Q68CR1 1132 aa16.63■□□□□ 0.25
PCDHA3-201ENST00000522353 GLT6D1Q7Z4J2 308 aa16.63■□□□□ 0.25
PCDHA3-201ENST00000522353 TRIM69Q86WT6 500 aa16.63■□□□□ 0.25
PCDHA3-201ENST00000522353 SLC44A2Q8IWA5 706 aaPredicted RBP16.63■□□□□ 0.25
PCDHA3-201ENST00000522353 ADAM32Q8TC27 787 aa16.63■□□□□ 0.25
PCDHA3-201ENST00000522353 ARHGAP20Q9P2F6 1191 aa16.63■□□□□ 0.25
PCDHA3-201ENST00000522353 TMCC3Q9ULS5 477 aa16.63■□□□□ 0.25
PCDHA3-201ENST00000522353 GIT1Q9Y2X7 761 aa16.63■□□□□ 0.25
PCDHA3-201ENST00000522353 ERFP50548 548 aa16.63■□□□□ 0.25
PCDHA3-201ENST00000522353 KLC1Q07866 573 aa16.63■□□□□ 0.25
PCDHA3-201ENST00000522353 C1orf186Q6ZWK4 172 aa16.63■□□□□ 0.25
PCDHA3-201ENST00000522353 ARHGEF19Q8IW93 802 aa16.63■□□□□ 0.25
PCDHA3-201ENST00000522353 B3GALNT2Q8NCR0 500 aa16.63■□□□□ 0.25
PCDHA3-201ENST00000522353 CYGBQ8WWM9 190 aa16.63■□□□□ 0.25
PCDHA3-201ENST00000522353 TSPAN18Q96SJ8 248 aa16.63■□□□□ 0.25
PCDHA3-201ENST00000522353 OMDQ99983 421 aa16.63■□□□□ 0.25
PCDHA3-201ENST00000522353 GNRH1P01148 92 aa16.63■□□□□ 0.25
PCDHA3-201ENST00000522353 THRAP10827 490 aa16.63■□□□□ 0.25
PCDHA3-201ENST00000522353 CTSEP14091 401 aa16.63■□□□□ 0.25
PCDHA3-201ENST00000522353 MMP13P45452 471 aa16.63■□□□□ 0.25
PCDHA3-201ENST00000522353 BOP1Q14137 746 aaKnown RBP16.63■□□□□ 0.25
PCDHA3-201ENST00000522353 GJC2Q5T442 439 aaPredicted RBP16.63■□□□□ 0.25
PCDHA3-201ENST00000522353 PAPD7Q5XG87 772 aaKnown RBP16.63■□□□□ 0.25
PCDHA3-201ENST00000522353 IL17RAQ96F46 866 aa16.63■□□□□ 0.25
PCDHA3-201ENST00000522353 EFCAB1Q9HAE3 211 aa16.63■□□□□ 0.25
PCDHA3-201ENST00000522353 SALL3Q9BXA9 1300 aa16.63■□□□□ 0.25
PCDHA3-201ENST00000522353 NPR3P17342 541 aa16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 RBM43Q6ZSC3 357 aaKnown RBP16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 TPGS1Q6ZTW0 290 aa16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 ANKRD23Q86SG2 305 aa16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 ARMC7Q9H6L4 198 aa16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 KCNMB3Q9NPA1 279 aa16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 BLOC1S4Q9NUP1 217 aa16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 IMPAD1Q9NX62 359 aa16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 POLG2Q9UHN1 485 aa16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 PADI4Q9UM07 663 aa16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 USP20Q9Y2K6 914 aa16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 KANSL1LA0AUZ9 987 aa16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 ERI2A8K979 691 aaKnown RBP16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 E5RJQ4 531 aa16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 TLL1O43897 1013 aa16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 RUNX1T1Q06455 604 aa16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 CNGA2Q16280 664 aa16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 CNDP1Q96KN2 507 aa16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 C2CD2Q9Y426 696 aa16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 SPATA31C2B4DYI2 1134 aa16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 RASSF9O75901 435 aa16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 CPA3P15088 417 aa16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 PPP2R1BP30154 601 aa16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 LRRC36Q1X8D7 754 aa16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 KDM7AQ6ZMT4 941 aa16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 MOB2Q70IA6 237 aa16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 METTL3Q86U44 580 aaKnown RBP16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 PLD3Q8IV08 490 aa16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 MAGEC3Q8TD91 643 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms