RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 ZDHHC14Q8IZN3 488 aa22.11■■□□□ 1.13
R3HCC1-208ENST00000522012 PCDH19Q8TAB3 1148 aa22.11■■□□□ 1.13
R3HCC1-208ENST00000522012 RPGRIP1Q96KN7 1286 aa22.11■■□□□ 1.13
R3HCC1-208ENST00000522012 EPAS1Q99814 870 aa22.11■■□□□ 1.13
R3HCC1-208ENST00000522012 SLITRK6Q9H5Y7 841 aa22.11■■□□□ 1.13
R3HCC1-208ENST00000522012 RCOR3Q9P2K3 495 aaPredicted RBP22.11■■□□□ 1.13
R3HCC1-208ENST00000522012 MRPS23Q9Y3D9 190 aaKnown RBP22.11■■□□□ 1.13
R3HCC1-208ENST00000522012 CPQQ9Y646 472 aa22.11■■□□□ 1.13
R3HCC1-208ENST00000522012 HS3ST4Q9Y661 456 aa22.11■■□□□ 1.13
R3HCC1-208ENST00000522012 MTCH2Q9Y6C9 303 aa22.11■■□□□ 1.13
R3HCC1-208ENST00000522012 ZNF487B1APH4 448 aa22.11■■□□□ 1.13
R3HCC1-208ENST00000522012 STC2O76061 302 aa22.11■■□□□ 1.13
R3HCC1-208ENST00000522012 PFKLP17858 780 aa22.11■■□□□ 1.13
R3HCC1-208ENST00000522012 TPI1P60174 286 aa22.11■■□□□ 1.13
R3HCC1-208ENST00000522012 SEMA3BQ13214 749 aa22.11■■□□□ 1.13
R3HCC1-208ENST00000522012 ADAM15Q13444 863 aa22.11■■□□□ 1.13
R3HCC1-208ENST00000522012 RFX8Q6ZV50 586 aa22.11■■□□□ 1.13
R3HCC1-208ENST00000522012 BBS12Q6ZW61 710 aa22.11■■□□□ 1.13
R3HCC1-208ENST00000522012 TTC16Q8NEE8 873 aa22.11■■□□□ 1.13
R3HCC1-208ENST00000522012 FAF2Q96CS3 445 aa22.11■■□□□ 1.13
R3HCC1-208ENST00000522012 FAM161BQ96MY7 647 aa22.11■■□□□ 1.13
R3HCC1-208ENST00000522012 TASP1Q9H6P5 420 aa22.11■■□□□ 1.13
R3HCC1-208ENST00000522012 PAPLNO95428 1278 aa22.1■■□□□ 1.13
R3HCC1-208ENST00000522012 AMPD1P23109 780 aa22.1■■□□□ 1.13
R3HCC1-208ENST00000522012 MLLT6P55198 1093 aaPredicted RBP22.1■■□□□ 1.13
R3HCC1-208ENST00000522012 SLC7A9P82251 487 aa22.1■■□□□ 1.13
R3HCC1-208ENST00000522012 MTA1Q13330 715 aa22.1■■□□□ 1.13
R3HCC1-208ENST00000522012 ADGRE1Q14246 886 aa22.1■■□□□ 1.13
R3HCC1-208ENST00000522012 SIX1Q15475 284 aaPredicted RBP22.1■■□□□ 1.13
R3HCC1-208ENST00000522012 PIK3R6Q5UE93 754 aa22.1■■□□□ 1.13
R3HCC1-208ENST00000522012 EP400NLQ6ZTU2 488 aa22.1■■□□□ 1.13
R3HCC1-208ENST00000522012 DENND1CQ8IV53 801 aa22.1■■□□□ 1.13
R3HCC1-208ENST00000522012 C1orf54Q8WWF1 131 aa22.1■■□□□ 1.13
R3HCC1-208ENST00000522012 ING5Q8WYH8 240 aa22.1■■□□□ 1.13
R3HCC1-208ENST00000522012 HAUS1Q96CS2 278 aa22.1■■□□□ 1.13
R3HCC1-208ENST00000522012 ZFRQ96KR1 1074 aaKnown RBP22.1■■□□□ 1.13
R3HCC1-208ENST00000522012 C1orf74Q96LT6 269 aa22.1■■□□□ 1.13
R3HCC1-208ENST00000522012 ZNF638Q14966 1978 aaKnown RBP22.09■■□□□ 1.13
R3HCC1-208ENST00000522012 APOL1O14791 398 aa22.09■■□□□ 1.13
R3HCC1-208ENST00000522012 LRIG2O94898 1065 aa22.09■■□□□ 1.13
R3HCC1-208ENST00000522012 CEBPBP17676 345 aa22.09■■□□□ 1.13
R3HCC1-208ENST00000522012 CORO1AP31146 461 aaKnown RBP22.09■■□□□ 1.13
R3HCC1-208ENST00000522012 HCAR3P49019 387 aa22.09■■□□□ 1.13
R3HCC1-208ENST00000522012 SLC11A2P49281 568 aa22.09■■□□□ 1.13
R3HCC1-208ENST00000522012 ZNF135P52742 658 aaPredicted RBP22.09■■□□□ 1.13
R3HCC1-208ENST00000522012 ITIH3Q06033 890 aa22.09■■□□□ 1.13
R3HCC1-208ENST00000522012 MS4A13Q5J8X5 152 aa22.09■■□□□ 1.13
R3HCC1-208ENST00000522012 RWDD4Q6NW29 188 aaKnown RBP22.09■■□□□ 1.13
R3HCC1-208ENST00000522012 SYCE2Q6PIF2 218 aa22.09■■□□□ 1.13
R3HCC1-208ENST00000522012 GPR149Q86SP6 731 aa22.09■■□□□ 1.13
R3HCC1-208ENST00000522012 KLHL7Q8IXQ5 586 aa22.09■■□□□ 1.13
R3HCC1-208ENST00000522012 PQLC3Q8N755 202 aa22.09■■□□□ 1.13
R3HCC1-208ENST00000522012 PRELID2Q8N945 189 aa22.09■■□□□ 1.13
R3HCC1-208ENST00000522012 ITFG1Q8TB96 612 aa22.09■■□□□ 1.13
R3HCC1-208ENST00000522012 STIM2Q9P246 746 aa22.09■■□□□ 1.13
R3HCC1-208ENST00000522012 R3HDM2Q9Y2K5 976 aaKnown RBP22.09■■□□□ 1.13
R3HCC1-208ENST00000522012 CCDC188H7C350 402 aa22.08■■□□□ 1.13
R3HCC1-208ENST00000522012 ACSL4O60488 711 aa22.08■■□□□ 1.13
R3HCC1-208ENST00000522012 KLKB1P03952 638 aa22.08■■□□□ 1.13
R3HCC1-208ENST00000522012 EPHB2P29323 1055 aa22.08■■□□□ 1.13
R3HCC1-208ENST00000522012 AVPR1AP37288 418 aa22.08■■□□□ 1.13
R3HCC1-208ENST00000522012 RAP1GAP2Q684P5 730 aa22.08■■□□□ 1.13
R3HCC1-208ENST00000522012 C1orf228Q6PIY5 440 aa22.08■■□□□ 1.13
R3HCC1-208ENST00000522012 Q7L0L9 218 aa22.08■■□□□ 1.13
R3HCC1-208ENST00000522012 C14orf80Q86SX3 495 aa22.08■■□□□ 1.13
R3HCC1-208ENST00000522012 CMTM8Q8IZV2 173 aa22.08■■□□□ 1.13
R3HCC1-208ENST00000522012 WBP2Q969T9 261 aa22.08■■□□□ 1.13
R3HCC1-208ENST00000522012 MAGOHBQ96A72 148 aaKnown RBP22.08■■□□□ 1.13
R3HCC1-208ENST00000522012 FAM118BQ9BPY3 351 aa22.08■■□□□ 1.13
R3HCC1-208ENST00000522012 SMG9Q9H0W8 520 aaKnown RBP22.08■■□□□ 1.13
R3HCC1-208ENST00000522012 ARHGEF4Q9NR80 690 aa22.08■■□□□ 1.13
R3HCC1-208ENST00000522012 SAE1Q9UBE0 346 aaPredicted RBP22.08■■□□□ 1.13
R3HCC1-208ENST00000522012 MYO7AQ13402 2215 aa22.08■■□□□ 1.12
R3HCC1-208ENST00000522012 GOLGA6L7A0A1B0GV03 622 aa22.07■■□□□ 1.12
R3HCC1-208ENST00000522012 E9PAM4 449 aa22.07■■□□□ 1.12
R3HCC1-208ENST00000522012 DLL1O00548 723 aa22.07■■□□□ 1.12
R3HCC1-208ENST00000522012 ZFXP17010 805 aaPredicted RBP22.07■■□□□ 1.12
R3HCC1-208ENST00000522012 HOXB8P17481 243 aaPredicted RBP22.07■■□□□ 1.12
R3HCC1-208ENST00000522012 ZXDBP98169 803 aa22.07■■□□□ 1.12
R3HCC1-208ENST00000522012 AUHQ13825 339 aaKnown RBP22.07■■□□□ 1.12
R3HCC1-208ENST00000522012 DPYSQ14117 519 aa22.07■■□□□ 1.12
R3HCC1-208ENST00000522012 SLC9A4Q6AI14 798 aa22.07■■□□□ 1.12
R3HCC1-208ENST00000522012 LRRC31Q6UY01 552 aa22.07■■□□□ 1.12
R3HCC1-208ENST00000522012 CHSY1Q86X52 802 aa22.07■■□□□ 1.12
R3HCC1-208ENST00000522012 MICALL1Q8N3F8 863 aa22.07■■□□□ 1.12
R3HCC1-208ENST00000522012 NOA1Q8NC60 698 aaKnown RBP22.07■■□□□ 1.12
R3HCC1-208ENST00000522012 ATG4AQ8WYN0 398 aa22.07■■□□□ 1.12
R3HCC1-208ENST00000522012 KRT12Q99456 494 aa22.07■■□□□ 1.12
R3HCC1-208ENST00000522012 DDX47Q9H0S4 455 aaKnown RBP22.07■■□□□ 1.12
R3HCC1-208ENST00000522012 CLDND1Q9NY35 253 aa22.07■■□□□ 1.12
R3HCC1-208ENST00000522012 VANGL2Q9ULK5 521 aa22.07■■□□□ 1.12
R3HCC1-208ENST00000522012 CLUHO75153 1309 aa22.07■■□□□ 1.12
R3HCC1-208ENST00000522012 MTCL1Q9Y4B5 1905 aaKnown RBP22.07■■□□□ 1.12
R3HCC1-208ENST00000522012 COL6A3P12111 3177 aa22.07■■□□□ 1.12
R3HCC1-208ENST00000522012 SOBPA7XYQ1 873 aa22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 ERCC2P18074 760 aa22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 FSHRP23945 695 aa22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 NRG1Q02297 640 aaPredicted RBP22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 SNX1Q13596 522 aa22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 CBX2Q14781 532 aaPredicted RBP22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms