RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 DRGXA6NNA5 263 aa9.82□□□□□ -0.84
CLK4-209ENST00000521621 IRF1P10914 325 aa9.82□□□□□ -0.84
CLK4-209ENST00000521621 DGKGP49619 791 aa9.82□□□□□ -0.84
CLK4-209ENST00000521621 SCAPQ12770 1279 aa9.82□□□□□ -0.84
CLK4-209ENST00000521621 MAPK8IP2Q13387 824 aaPredicted RBP9.82□□□□□ -0.84
CLK4-209ENST00000521621 SPECC1LQ69YQ0 1117 aa9.82□□□□□ -0.84
CLK4-209ENST00000521621 PLEKHA7Q6IQ23 1121 aa9.82□□□□□ -0.84
CLK4-209ENST00000521621 ZNF783Q6ZMS7 281 aa9.82□□□□□ -0.84
CLK4-209ENST00000521621 GPIHBP1Q8IV16 184 aa9.82□□□□□ -0.84
CLK4-209ENST00000521621 VSTM4Q8IW00 320 aa9.82□□□□□ -0.84
CLK4-209ENST00000521621 ZNF683Q8IZ20 524 aa9.82□□□□□ -0.84
CLK4-209ENST00000521621 MCOLN2Q8IZK6 566 aa9.82□□□□□ -0.84
CLK4-209ENST00000521621 TTC17Q96AE7 1141 aa9.82□□□□□ -0.84
CLK4-209ENST00000521621 ARHGEF4Q9NR80 690 aa9.82□□□□□ -0.84
CLK4-209ENST00000521621 PPARGC1AQ9UBK2 798 aaKnown RBP9.82□□□□□ -0.84
CLK4-209ENST00000521621 STK25O00506 426 aa9.81□□□□□ -0.84
CLK4-209ENST00000521621 RTN2O75298 545 aa9.81□□□□□ -0.84
CLK4-209ENST00000521621 ASLP04424 464 aa9.81□□□□□ -0.84
CLK4-209ENST00000521621 RDXP35241 583 aaKnown RBP9.81□□□□□ -0.84
CLK4-209ENST00000521621 SLC6A11P48066 632 aa9.81□□□□□ -0.84
CLK4-209ENST00000521621 DGKEP52429 567 aa9.81□□□□□ -0.84
CLK4-209ENST00000521621 ACAP1Q15027 740 aa9.81□□□□□ -0.84
CLK4-209ENST00000521621 DCAF6Q58WW2 860 aa9.81□□□□□ -0.84
CLK4-209ENST00000521621 ARTNQ5T4W7 220 aa9.81□□□□□ -0.84
CLK4-209ENST00000521621 SND1Q7KZF4 910 aaKnown RBP eCLIP9.81□□□□□ -0.84
CLK4-209ENST00000521621 ANKS1BQ7Z6G8 1248 aa9.81□□□□□ -0.84
CLK4-209ENST00000521621 FAM149B1Q96BN6 582 aa9.81□□□□□ -0.84
CLK4-209ENST00000521621 TMA16Q96EY4 203 aaKnown RBP9.81□□□□□ -0.84
CLK4-209ENST00000521621 OSBPL2Q9H1P3 480 aa9.81□□□□□ -0.84
CLK4-209ENST00000521621 IFNKQ9P0W0 207 aa9.81□□□□□ -0.84
CLK4-209ENST00000521621 NUDT5Q9UKK9 219 aa9.81□□□□□ -0.84
CLK4-209ENST00000521621 SSU72P8A0A1W2PR75 194 aa9.81□□□□□ -0.84
CLK4-209ENST00000521621 GYPCP04921 128 aa9.81□□□□□ -0.84
CLK4-209ENST00000521621 CD72P21854 359 aa9.81□□□□□ -0.84
CLK4-209ENST00000521621 ZNF135P52742 658 aaPredicted RBP9.81□□□□□ -0.84
CLK4-209ENST00000521621 TBX2Q13207 712 aaPredicted RBP9.81□□□□□ -0.84
CLK4-209ENST00000521621 TCEAL1Q15170 157 aa9.81□□□□□ -0.84
CLK4-209ENST00000521621 TAF3Q5VWG9 929 aa9.81□□□□□ -0.84
CLK4-209ENST00000521621 PSTKQ8IV42 348 aaKnown RBP9.81□□□□□ -0.84
CLK4-209ENST00000521621 AHI1Q8N157 1196 aa9.81□□□□□ -0.84
CLK4-209ENST00000521621 PPP1R9BQ96SB3 815 aa9.81□□□□□ -0.84
CLK4-209ENST00000521621 XPO4Q9C0E2 1151 aaKnown RBP9.81□□□□□ -0.84
CLK4-209ENST00000521621 ADAM22Q9P0K1 906 aa9.81□□□□□ -0.84
CLK4-209ENST00000521621 THAP10Q9P2Z0 257 aaPredicted RBP9.81□□□□□ -0.84
CLK4-209ENST00000521621 LUC7L2Q9Y383 392 aaKnown RBP9.81□□□□□ -0.84
CLK4-209ENST00000521621 NYNRINQ9P2P1 1898 aaKnown RBP9.81□□□□□ -0.84
CLK4-209ENST00000521621 TYW5A2RUC4 315 aaKnown RBP9.8□□□□□ -0.84
CLK4-209ENST00000521621 NEDD8-MDP1E9PL57 170 aa9.8□□□□□ -0.84
CLK4-209ENST00000521621 MSI1O43347 362 aaKnown RBP9.8□□□□□ -0.84
CLK4-209ENST00000521621 RNF40O75150 1001 aa9.8□□□□□ -0.84
CLK4-209ENST00000521621 ABCB4P21439 1286 aa9.8□□□□□ -0.84
CLK4-209ENST00000521621 TACR2P21452 398 aa9.8□□□□□ -0.84
CLK4-209ENST00000521621 TNFAIP3P21580 790 aa9.8□□□□□ -0.84
CLK4-209ENST00000521621 SLC6A4P31645 630 aa9.8□□□□□ -0.84
CLK4-209ENST00000521621 TAF5Q15542 800 aa9.8□□□□□ -0.84
CLK4-209ENST00000521621 SPDYCQ5MJ68 293 aa9.8□□□□□ -0.84
CLK4-209ENST00000521621 RABGAP1LQ5R372 815 aa9.8□□□□□ -0.84
CLK4-209ENST00000521621 FAM102AQ5T9C2 384 aaPredicted RBP9.8□□□□□ -0.84
CLK4-209ENST00000521621 MMS22LQ6ZRQ5 1243 aa9.8□□□□□ -0.84
CLK4-209ENST00000521621 ZNF571Q7Z3V5 609 aaPredicted RBP9.8□□□□□ -0.84
CLK4-209ENST00000521621 UCMAQ8WVF2 138 aa9.8□□□□□ -0.84
CLK4-209ENST00000521621 CPA5Q8WXQ8 436 aa9.8□□□□□ -0.84
CLK4-209ENST00000521621 P2RY11Q96G91 374 aa9.8□□□□□ -0.84
CLK4-209ENST00000521621 LOXL4Q96JB6 756 aa9.8□□□□□ -0.84
CLK4-209ENST00000521621 FAM204AQ9H8W3 233 aa9.8□□□□□ -0.84
CLK4-209ENST00000521621 DNAJC17Q9NVM6 304 aaKnown RBP9.8□□□□□ -0.84
CLK4-209ENST00000521621 APBB3O95704 486 aa9.8□□□□□ -0.84
CLK4-209ENST00000521621 ZNF143P52747 638 aaPredicted RBP9.8□□□□□ -0.84
CLK4-209ENST00000521621 SATB1Q01826 763 aa9.8□□□□□ -0.84
CLK4-209ENST00000521621 ANO4Q32M45 955 aa9.8□□□□□ -0.84
CLK4-209ENST00000521621 VPS36Q86VN1 386 aa9.8□□□□□ -0.84
CLK4-209ENST00000521621 IL17RCQ8NAC3 791 aa9.8□□□□□ -0.84
CLK4-209ENST00000521621 ZC3H10Q96K80 434 aaKnown RBP9.8□□□□□ -0.84
CLK4-209ENST00000521621 PRICKLE1Q96MT3 831 aaPredicted RBP9.8□□□□□ -0.84
CLK4-209ENST00000521621 HAUS4Q9H6D7 363 aa9.8□□□□□ -0.84
CLK4-209ENST00000521621 PARVAQ9NVD7 372 aa9.8□□□□□ -0.84
CLK4-209ENST00000521621 DDIT4Q9NX09 232 aa9.8□□□□□ -0.84
CLK4-209ENST00000521621 HCN2Q9UL51 889 aa9.8□□□□□ -0.84
CLK4-209ENST00000521621 TBC1D30Q9Y2I9 924 aa9.8□□□□□ -0.84
CLK4-209ENST00000521621 SCINQ9Y6U3 715 aa9.8□□□□□ -0.84
CLK4-209ENST00000521621 SRPRAP08240 638 aaKnown RBP9.8□□□□□ -0.84
CLK4-209ENST00000521621 HOXC13P31276 330 aa9.8□□□□□ -0.84
CLK4-209ENST00000521621 KLHL30Q0D2K2 578 aa9.8□□□□□ -0.84
CLK4-209ENST00000521621 BYSLQ13895 437 aaKnown RBP9.8□□□□□ -0.84
CLK4-209ENST00000521621 MANEALQ5VSG8 457 aa9.8□□□□□ -0.84
CLK4-209ENST00000521621 TRNP1Q6NT89 227 aa9.8□□□□□ -0.84
CLK4-209ENST00000521621 TTC8Q8TAM2 541 aa9.8□□□□□ -0.84
CLK4-209ENST00000521621 FAM122AQ96E09 287 aa9.8□□□□□ -0.84
CLK4-209ENST00000521621 MRFAP1L1Q96HT8 127 aa9.8□□□□□ -0.84
CLK4-209ENST00000521621 SLC8A2Q9UPR5 921 aa9.8□□□□□ -0.84
CLK4-209ENST00000521621 M0QYT0 321 aa9.79□□□□□ -0.84
CLK4-209ENST00000521621 PIK3R2O00459 728 aa9.79□□□□□ -0.84
CLK4-209ENST00000521621 DDX3XO00571 662 aaKnown RBP eCLIP9.79□□□□□ -0.84
CLK4-209ENST00000521621 LRP3O75074 770 aa9.79□□□□□ -0.84
CLK4-209ENST00000521621 LUC7L3O95232 432 aaKnown RBP9.79□□□□□ -0.84
CLK4-209ENST00000521621 IGLV3-19P01714 112 aa9.79□□□□□ -0.84
CLK4-209ENST00000521621 KRT3P12035 628 aa9.79□□□□□ -0.84
CLK4-209ENST00000521621 FECHP22830 423 aa9.79□□□□□ -0.84
CLK4-209ENST00000521621 NTSR1P30989 418 aa9.79□□□□□ -0.84
CLK4-209ENST00000521621 FLT3P36888 993 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms