RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 MVDP53602 400 aa3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 TAS2R50P59544 299 aa3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 THOC5Q13769 683 aaKnown RBP3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 PRKD1Q15139 912 aaPredicted RBP3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 TSTQ16762 297 aaKnown RBP3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 RNASE12Q5GAN4 147 aaKnown RBP3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 CCDC30Q5VVM6 783 aa3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 ZNF585AQ6P3V2 769 aa3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 KYAT3Q6YP21 454 aaKnown RBP3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 PTCHD4Q6ZW05 846 aa3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 TTC30AQ86WT1 665 aa3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 LAS2Q8IYD9 372 aa3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 OR52L2PQ8NGH6 319 aa3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 RP9Q8TA86 221 aaKnown RBP3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 SH3RF3Q8TEJ3 882 aaPredicted RBP3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 SLC25A43Q8WUT9 341 aaPredicted RBP3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 ARRDC3Q96B67 414 aa3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 ELP4Q96EB1 424 aa3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 PBKQ96KB5 322 aa3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 SORCS2Q96PQ0 1159 aa3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 PPP1R10Q96QC0 940 aaKnown RBP3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 ALG8Q9BVK2 526 aa3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 ACAD9Q9H845 621 aa3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 PLEKHA5Q9HAU0 1116 aa3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 TSC22D4Q9Y3Q8 395 aa3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 MAST3O60307 1309 aa3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 SALL3Q9BXA9 1300 aa3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 H3BNC9 293 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 AP4M1O00189 453 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 ZNF213O14771 459 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 SPTLC2O15270 562 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 YY2O15391 372 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 HNRNPRO43390 633 aaKnown RBP3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 SUV39H1O43463 412 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 DOK2O60496 412 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 GFPT2O94808 682 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 MLYCDO95822 493 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 TMIGD3P0DMS9 266 aaPredicted RBP3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 C6P13671 934 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 MMP8P22894 467 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 EPHA8P29322 1005 aaPredicted RBP3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 IGHMBP2P38935 993 aaKnown RBP3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 MPLP40238 635 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 FOLR3P41439 243 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 RCAN1P53805 252 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 RAE1P78406 368 aaKnown RBP3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 GUCY1B3Q02153 619 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 LMAN2Q12907 356 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 BMPR2Q13873 1038 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 ERV3-1Q14264 604 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 HS1BP3Q53T59 392 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 ZNF569Q5MCW4 686 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 SNX30Q5VWJ9 437 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 LIPMQ5VYY2 423 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 FAM205BPQ63HN1 556 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 LRRC8DQ7L1W4 858 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 RTL10Q7L3V2 364 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 TCP11L2Q8N4U5 519 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 FSIP1Q8NA03 581 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 B3GALNT2Q8NCR0 500 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 LINC00476Q8WZB0 136 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 APOPT1Q96IL0 206 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 Q96MF0 132 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 PIGSQ96S52 555 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 BARD1Q99728 777 aaKnown RBP3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 MLST8Q9BVC4 326 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 FSD1LQ9BXM9 530 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 SERHL2Q9H4I8 314 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 STN1Q9H668 368 aaKnown RBP3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 SMYD2Q9NRG4 433 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 DUSP22Q9NRW4 184 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 OLA1Q9NTK5 396 aaKnown RBP3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 ABHD10Q9NUJ1 306 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 FBXO28Q9NVF7 368 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 EHD3Q9NZN3 535 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 ANKFY1Q9P2R3 1169 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 FBXO2Q9UK22 296 aaPredicted RBP3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 FZD4Q9ULV1 537 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 PCDHB2Q9Y5E7 798 aa3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 COPG1Q9Y678 874 aaKnown RBP3.84□□□□□ -1.79
HMGN1P28-201ENST00000521340 NPIPB13A6NJU9 1138 aa3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 NPIPB5A8MRT5 1133 aa3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 NPIPB4C9JG80 1138 aa3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 K7ENM7 598 aa3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 GRM8O00222 908 aa3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 SEPT4O43236 478 aa3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 TIMM44O43615 452 aa3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 PTP4A3O75365 173 aa3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 RTN3O95197 1032 aaPredicted RBP3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 SLPIP03973 132 aa3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 APEHP13798 732 aaKnown RBP3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 CPA1P15085 419 aa3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 ZFXP17010 805 aaPredicted RBP3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 TACR2P21452 398 aa3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 YY1P25490 414 aa3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 DUSP1P28562 367 aa3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 GALNSP34059 522 aa3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 ADRA1BP35368 520 aa3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 ACVRL1P37023 503 aa3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 ZNF84P51523 738 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms