RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 COX16Q9P0S2 106 aa21.43■■□□□ 1.02
TRIM35-203ENST00000521253 EBF1Q9UH73 591 aa21.43■■□□□ 1.02
TRIM35-203ENST00000521253 GOLGA6L19H0YKK7 550 aa21.42■■□□□ 1.02
TRIM35-203ENST00000521253 GOLGA8SH3BPF8 625 aa21.42■■□□□ 1.02
TRIM35-203ENST00000521253 AXIN1O15169 862 aa21.42■■□□□ 1.02
TRIM35-203ENST00000521253 TBL1XO60907 577 aa21.42■■□□□ 1.02
TRIM35-203ENST00000521253 UNGP13051 313 aaPredicted RBP21.42■■□□□ 1.02
TRIM35-203ENST00000521253 MMP8P22894 467 aa21.42■■□□□ 1.02
TRIM35-203ENST00000521253 CNR2P34972 360 aa21.42■■□□□ 1.02
TRIM35-203ENST00000521253 MPP7Q5T2T1 576 aa21.42■■□□□ 1.02
TRIM35-203ENST00000521253 OTUD1Q5VV17 481 aaPredicted RBP21.42■■□□□ 1.02
TRIM35-203ENST00000521253 RNF43Q68DV7 783 aa21.42■■□□□ 1.02
TRIM35-203ENST00000521253 ANKS1BQ7Z6G8 1248 aa21.42■■□□□ 1.02
TRIM35-203ENST00000521253 BTN2A3PQ96KV6 586 aa21.42■■□□□ 1.02
TRIM35-203ENST00000521253 CFAP54Q96N23 3096 aa21.42■■□□□ 1.02
TRIM35-203ENST00000521253 ADAM33Q9BZ11 813 aa21.42■■□□□ 1.02
TRIM35-203ENST00000521253 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.42■■□□□ 1.02
TRIM35-203ENST00000521253 CALCOCO1Q9P1Z2 691 aa21.42■■□□□ 1.02
TRIM35-203ENST00000521253 MYO6Q9UM54 1294 aa21.42■■□□□ 1.02
TRIM35-203ENST00000521253 SMG5Q9UPR3 1016 aaKnown RBP21.42■■□□□ 1.02
TRIM35-203ENST00000521253 FAM186AA6NE01 2351 aa21.41■■□□□ 1.02
TRIM35-203ENST00000521253 PTPRZ1P23471 2315 aaPredicted RBP21.41■■□□□ 1.02
TRIM35-203ENST00000521253 ZNF292O60281 2723 aa21.41■■□□□ 1.02
TRIM35-203ENST00000521253 KCNU1A8MYU2 1149 aa21.41■■□□□ 1.02
TRIM35-203ENST00000521253 M0QYT0 321 aa21.41■■□□□ 1.02
TRIM35-203ENST00000521253 SLC2A3P11169 496 aa21.41■■□□□ 1.02
TRIM35-203ENST00000521253 FERP16591 822 aa21.41■■□□□ 1.02
TRIM35-203ENST00000521253 HLA-FP30511 346 aa21.41■■□□□ 1.02
TRIM35-203ENST00000521253 NTSR1P30989 418 aa21.41■■□□□ 1.02
TRIM35-203ENST00000521253 CCR1P32246 355 aa21.41■■□□□ 1.02
TRIM35-203ENST00000521253 WASP42768 502 aa21.41■■□□□ 1.02
TRIM35-203ENST00000521253 NME3Q13232 169 aa21.41■■□□□ 1.02
TRIM35-203ENST00000521253 CLEC16AQ2KHT3 1053 aa21.41■■□□□ 1.02
TRIM35-203ENST00000521253 MS4A13Q5J8X5 152 aa21.41■■□□□ 1.02
TRIM35-203ENST00000521253 RAP1GAP2Q684P5 730 aa21.41■■□□□ 1.02
TRIM35-203ENST00000521253 ANO7Q6IWH7 933 aa21.41■■□□□ 1.02
TRIM35-203ENST00000521253 CHPFQ8IZ52 775 aa21.41■■□□□ 1.02
TRIM35-203ENST00000521253 HJURPQ8NCD3 748 aaPredicted RBP21.41■■□□□ 1.02
TRIM35-203ENST00000521253 NPY6RQ99463 290 aa21.41■■□□□ 1.02
TRIM35-203ENST00000521253 AGPAT1Q99943 283 aa21.41■■□□□ 1.02
TRIM35-203ENST00000521253 RRN3Q9NYV6 651 aa21.41■■□□□ 1.02
TRIM35-203ENST00000521253 GVINP1Q7Z2Y8 2422 aa21.41■■□□□ 1.02
TRIM35-203ENST00000521253 OTOGLQ3ZCN5 2332 aa21.41■■□□□ 1.02
TRIM35-203ENST00000521253 LRRC53A6NM62 1247 aa21.4■■□□□ 1.02
TRIM35-203ENST00000521253 CCDC172P0C7W6 258 aa21.4■■□□□ 1.02
TRIM35-203ENST00000521253 TFE3P19532 575 aaPredicted RBP21.4■■□□□ 1.02
TRIM35-203ENST00000521253 TACR2P21452 398 aa21.4■■□□□ 1.02
TRIM35-203ENST00000521253 FLT3P36888 993 aa21.4■■□□□ 1.02
TRIM35-203ENST00000521253 NSFP46459 744 aaKnown RBP21.4■■□□□ 1.02
TRIM35-203ENST00000521253 RPS24P62847 133 aaKnown RBP21.4■■□□□ 1.02
TRIM35-203ENST00000521253 CENPCQ03188 943 aa21.4■■□□□ 1.02
TRIM35-203ENST00000521253 SIM2Q14190 667 aaPredicted RBP21.4■■□□□ 1.02
TRIM35-203ENST00000521253 LPAL2Q16609 132 aa21.4■■□□□ 1.02
TRIM35-203ENST00000521253 TMEM215Q68D42 235 aa21.4■■□□□ 1.02
TRIM35-203ENST00000521253 PRR23BQ6ZRT6 265 aa21.4■■□□□ 1.02
TRIM35-203ENST00000521253 IRF2BP2Q7Z5L9 587 aa21.4■■□□□ 1.02
TRIM35-203ENST00000521253 RASSF3Q86WH2 238 aa21.4■■□□□ 1.02
TRIM35-203ENST00000521253 CHSY1Q86X52 802 aa21.4■■□□□ 1.02
TRIM35-203ENST00000521253 ATP6V0D2Q8N8Y2 350 aa21.4■■□□□ 1.02
TRIM35-203ENST00000521253 MDGA1Q8NFP4 955 aa21.4■■□□□ 1.02
TRIM35-203ENST00000521253 WFDC5Q8TCV5 224 aa21.4■■□□□ 1.02
TRIM35-203ENST00000521253 GAB3Q8WWW8 586 aa21.4■■□□□ 1.02
TRIM35-203ENST00000521253 RNF34Q969K3 372 aa21.4■■□□□ 1.02
TRIM35-203ENST00000521253 NT5C3BQ969T7 300 aa21.4■■□□□ 1.02
TRIM35-203ENST00000521253 C11orf70Q9BRQ4 267 aa21.4■■□□□ 1.02
TRIM35-203ENST00000521253 TTYH3Q9C0H2 523 aa21.4■■□□□ 1.02
TRIM35-203ENST00000521253 POLMQ9NP87 494 aaPredicted RBP21.4■■□□□ 1.02
TRIM35-203ENST00000521253 SEPT11Q9NVA2 429 aaKnown RBP21.4■■□□□ 1.02
TRIM35-203ENST00000521253 STIM2Q9P246 746 aa21.4■■□□□ 1.02
TRIM35-203ENST00000521253 SLC12A6Q9UHW9 1150 aa21.4■■□□□ 1.02
TRIM35-203ENST00000521253 TMEM59LQ9UK28 342 aa21.4■■□□□ 1.02
TRIM35-203ENST00000521253 STAP1Q9ULZ2 295 aa21.4■■□□□ 1.02
TRIM35-203ENST00000521253 RPP40O75818 363 aaKnown RBP21.39■■□□□ 1.01
TRIM35-203ENST00000521253 HOXB2P14652 356 aa21.39■■□□□ 1.01
TRIM35-203ENST00000521253 ABCB4P21439 1286 aa21.39■■□□□ 1.01
TRIM35-203ENST00000521253 SULT1E1P49888 294 aa21.39■■□□□ 1.01
TRIM35-203ENST00000521253 UBASH3AP57075 661 aa21.39■■□□□ 1.01
TRIM35-203ENST00000521253 PTP4A2Q12974 167 aa21.39■■□□□ 1.01
TRIM35-203ENST00000521253 NFKBIBQ15653 356 aa21.39■■□□□ 1.01
TRIM35-203ENST00000521253 TRNP1Q6NT89 227 aa21.39■■□□□ 1.01
TRIM35-203ENST00000521253 PHLDB2Q86SQ0 1253 aa21.39■■□□□ 1.01
TRIM35-203ENST00000521253 LGI2Q8N0V4 545 aa21.39■■□□□ 1.01
TRIM35-203ENST00000521253 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.39■■□□□ 1.01
TRIM35-203ENST00000521253 TBCBQ99426 244 aa21.39■■□□□ 1.01
TRIM35-203ENST00000521253 GABRG3Q99928 467 aa21.39■■□□□ 1.01
TRIM35-203ENST00000521253 TPSD1Q9BZJ3 242 aa21.39■■□□□ 1.01
TRIM35-203ENST00000521253 CIPCQ9C0C6 399 aa21.39■■□□□ 1.01
TRIM35-203ENST00000521253 PIGVQ9NUD9 493 aa21.39■■□□□ 1.01
TRIM35-203ENST00000521253 ABCB8Q9NUT2 735 aa21.39■■□□□ 1.01
TRIM35-203ENST00000521253 ELOVL2Q9NXB9 296 aa21.39■■□□□ 1.01
TRIM35-203ENST00000521253 CACNA2D2Q9NY47 1150 aa21.39■■□□□ 1.01
TRIM35-203ENST00000521253 A0A1W2PQF6 199 aa21.38■■□□□ 1.01
TRIM35-203ENST00000521253 TYW5A2RUC4 315 aaKnown RBP21.38■■□□□ 1.01
TRIM35-203ENST00000521253 ALDH1A2O94788 518 aa21.38■■□□□ 1.01
TRIM35-203ENST00000521253 EIF4HQ15056 248 aaKnown RBP21.38■■□□□ 1.01
TRIM35-203ENST00000521253 SLC25A52Q3SY17 297 aa21.38■■□□□ 1.01
TRIM35-203ENST00000521253 SDE2Q6IQ49 451 aa21.38■■□□□ 1.01
TRIM35-203ENST00000521253 CEP68Q76N32 757 aa21.38■■□□□ 1.01
TRIM35-203ENST00000521253 PHF13Q86YI8 300 aaPredicted RBP21.38■■□□□ 1.01
TRIM35-203ENST00000521253 MFN1Q8IWA4 741 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 237.3 ms