RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 IBSPP21815 317 aaPredicted RBP6.61□□□□□ -1.35
PABPC1-216ENST00000520868 ZFP36P26651 326 aaKnown RBP6.61□□□□□ -1.35
PABPC1-216ENST00000520868 TCF7P36402 384 aaPredicted RBP6.61□□□□□ -1.35
PABPC1-216ENST00000520868 SREBF1P36956 1147 aa6.61□□□□□ -1.35
PABPC1-216ENST00000520868 IGBP1P78318 339 aa6.61□□□□□ -1.35
PABPC1-216ENST00000520868 MXRA7P84157 204 aa6.61□□□□□ -1.35
PABPC1-216ENST00000520868 NHLH1Q02575 133 aa6.61□□□□□ -1.35
PABPC1-216ENST00000520868 MGAT3Q09327 533 aa6.61□□□□□ -1.35
PABPC1-216ENST00000520868 TROAPQ12815 778 aa6.61□□□□□ -1.35
PABPC1-216ENST00000520868 PPFIA1Q13136 1202 aa6.61□□□□□ -1.35
PABPC1-216ENST00000520868 KLF1Q13351 362 aaPredicted RBP6.61□□□□□ -1.35
PABPC1-216ENST00000520868 LPIN1Q14693 890 aa6.61□□□□□ -1.35
PABPC1-216ENST00000520868 WTAPQ15007 396 aa6.61□□□□□ -1.35
PABPC1-216ENST00000520868 NOMO1Q15155 1222 aa6.61□□□□□ -1.35
PABPC1-216ENST00000520868 CSRP2Q16527 193 aa6.61□□□□□ -1.35
PABPC1-216ENST00000520868 RNF187Q5TA31 235 aaPredicted RBP6.61□□□□□ -1.35
PABPC1-216ENST00000520868 PCSK4Q6UW60 755 aa6.61□□□□□ -1.35
PABPC1-216ENST00000520868 RSPH3Q86UC2 560 aa6.61□□□□□ -1.35
PABPC1-216ENST00000520868 DRC7Q8IY82 874 aa6.61□□□□□ -1.35
PABPC1-216ENST00000520868 DNAJB3Q8WWF6 145 aa6.61□□□□□ -1.35
PABPC1-216ENST00000520868 CUL5Q93034 780 aa6.61□□□□□ -1.35
PABPC1-216ENST00000520868 ZBTB10Q96DT7 871 aa6.61□□□□□ -1.35
PABPC1-216ENST00000520868 MLST8Q9BVC4 326 aa6.61□□□□□ -1.35
PABPC1-216ENST00000520868 LMAN2LQ9H0V9 348 aa6.61□□□□□ -1.35
PABPC1-216ENST00000520868 MUTYHQ9UIF7 546 aa6.61□□□□□ -1.35
PABPC1-216ENST00000520868 SIP14410 1827 aa6.61□□□□□ -1.35
PABPC1-216ENST00000520868 BAZ2BQ9UIF8 2168 aaKnown RBP6.61□□□□□ -1.35
PABPC1-216ENST00000520868 MICAL3Q7RTP6 2002 aa6.6□□□□□ -1.35
PABPC1-216ENST00000520868 ADGRA3Q8IWK6 1321 aa6.6□□□□□ -1.35
PABPC1-216ENST00000520868 GSTTP1A0A1W2PQM5 241 aa6.6□□□□□ -1.35
PABPC1-216ENST00000520868 E7EWF7 191 aa6.6□□□□□ -1.35
PABPC1-216ENST00000520868 C5orf67F2Z3F1 127 aa6.6□□□□□ -1.35
PABPC1-216ENST00000520868 MEIS2O14770 477 aa6.6□□□□□ -1.35
PABPC1-216ENST00000520868 TEX33O43247 280 aa6.6□□□□□ -1.35
PABPC1-216ENST00000520868 NCR1O76036 304 aa6.6□□□□□ -1.35
PABPC1-216ENST00000520868 LINC00271P0C7V0 271 aa6.6□□□□□ -1.35
PABPC1-216ENST00000520868 GSPT1P15170 499 aaKnown RBP6.6□□□□□ -1.35
PABPC1-216ENST00000520868 DNAJB1P25685 340 aa6.6□□□□□ -1.35
PABPC1-216ENST00000520868 CD52P31358 61 aa6.6□□□□□ -1.35
PABPC1-216ENST00000520868 NDUFV1P49821 464 aa6.6□□□□□ -1.35
PABPC1-216ENST00000520868 FAM189BP81408 668 aa6.6□□□□□ -1.35
PABPC1-216ENST00000520868 PPP3CAQ08209 521 aa6.6□□□□□ -1.35
PABPC1-216ENST00000520868 MGAT2Q10469 447 aa6.6□□□□□ -1.35
PABPC1-216ENST00000520868 CAMK1Q14012 370 aa6.6□□□□□ -1.35
PABPC1-216ENST00000520868 SMN1Q16637 294 aaKnown RBP6.6□□□□□ -1.35
PABPC1-216ENST00000520868 FBXO47Q5MNV8 452 aa6.6□□□□□ -1.35
PABPC1-216ENST00000520868 ARMC6Q6NXE6 501 aa6.6□□□□□ -1.35
PABPC1-216ENST00000520868 CATIPQ7Z7H3 387 aa6.6□□□□□ -1.35
PABPC1-216ENST00000520868 RBM23Q86U06 439 aaKnown RBP6.6□□□□□ -1.35
PABPC1-216ENST00000520868 NCOA7Q8NI08 942 aa6.6□□□□□ -1.35
PABPC1-216ENST00000520868 SLC35B2Q8TB61 432 aa6.6□□□□□ -1.35
PABPC1-216ENST00000520868 CASKIN2Q8WXE0 1202 aa6.6□□□□□ -1.35
PABPC1-216ENST00000520868 SEPT1Q8WYJ6 367 aa6.6□□□□□ -1.35
PABPC1-216ENST00000520868 HOXB13Q92826 284 aaPredicted RBP6.6□□□□□ -1.35
PABPC1-216ENST00000520868 GLG1Q92896 1179 aa6.6□□□□□ -1.35
PABPC1-216ENST00000520868 ZNF689Q96CS4 500 aaPredicted RBP6.6□□□□□ -1.35
PABPC1-216ENST00000520868 RRP36Q96EU6 259 aaKnown RBP6.6□□□□□ -1.35
PABPC1-216ENST00000520868 CYFIP2Q96F07 1278 aa6.6□□□□□ -1.35
PABPC1-216ENST00000520868 AGAP2Q99490 1192 aa6.6□□□□□ -1.35
PABPC1-216ENST00000520868 SENP7Q9BQF6 1050 aa6.6□□□□□ -1.35
PABPC1-216ENST00000520868 REXO4Q9GZR2 422 aaKnown RBP6.6□□□□□ -1.35
PABPC1-216ENST00000520868 FAM49AQ9H0Q0 323 aaPredicted RBP6.6□□□□□ -1.35
PABPC1-216ENST00000520868 TMEM140Q9NV12 185 aa6.6□□□□□ -1.35
PABPC1-216ENST00000520868 C11orf21Q9P2W6 132 aa6.6□□□□□ -1.35
PABPC1-216ENST00000520868 CD207Q9UJ71 328 aa6.6□□□□□ -1.35
PABPC1-216ENST00000520868 TUBE1Q9UJT0 475 aa6.6□□□□□ -1.35
PABPC1-216ENST00000520868 DMRT1Q9Y5R6 373 aa6.6□□□□□ -1.35
PABPC1-216ENST00000520868 WDFY4Q6ZS81 3184 aa6.59□□□□□ -1.35
PABPC1-216ENST00000520868 C5orf42Q9H799 3197 aa6.59□□□□□ -1.35
PABPC1-216ENST00000520868 FRMPD4Q14CM0 1322 aa6.59□□□□□ -1.35
PABPC1-216ENST00000520868 MYH6P13533 1939 aa6.59□□□□□ -1.35
PABPC1-216ENST00000520868 hCG_1642624A0A1W2PR95 340 aa6.59□□□□□ -1.35
PABPC1-216ENST00000520868 DRGXA6NNA5 263 aa6.59□□□□□ -1.35
PABPC1-216ENST00000520868 B3GALT2O43825 422 aa6.59□□□□□ -1.35
PABPC1-216ENST00000520868 TBX10O75333 385 aa6.59□□□□□ -1.35
PABPC1-216ENST00000520868 NDUFA10O95299 355 aa6.59□□□□□ -1.35
PABPC1-216ENST00000520868 MMP1P03956 469 aa6.59□□□□□ -1.35
PABPC1-216ENST00000520868 RAP2AP10114 183 aa6.59□□□□□ -1.35
PABPC1-216ENST00000520868 OSMP13725 252 aa6.59□□□□□ -1.35
PABPC1-216ENST00000520868 KCNA2P16389 499 aa6.59□□□□□ -1.35
PABPC1-216ENST00000520868 GATMP50440 423 aa6.59□□□□□ -1.35
PABPC1-216ENST00000520868 MRPS6P82932 125 aaKnown RBP6.59□□□□□ -1.35
PABPC1-216ENST00000520868 UBE2SQ16763 222 aa6.59□□□□□ -1.35
PABPC1-216ENST00000520868 BEAN1Q3B7T3 259 aa6.59□□□□□ -1.35
PABPC1-216ENST00000520868 PDCD4Q53EL6 469 aaKnown RBP6.59□□□□□ -1.35
PABPC1-216ENST00000520868 MARCH8Q5T0T0 291 aa6.59□□□□□ -1.35
PABPC1-216ENST00000520868 FAM102AQ5T9C2 384 aaPredicted RBP6.59□□□□□ -1.35
PABPC1-216ENST00000520868 AFMIDQ63HM1 303 aa6.59□□□□□ -1.35
PABPC1-216ENST00000520868 TAF2Q6P1X5 1199 aa6.59□□□□□ -1.35
PABPC1-216ENST00000520868 XRRA1Q6P2D8 792 aa6.59□□□□□ -1.35
PABPC1-216ENST00000520868 TSHZ1Q6ZSZ6 1077 aa6.59□□□□□ -1.35
PABPC1-216ENST00000520868 ADGRD2Q7Z7M1 963 aa6.59□□□□□ -1.35
PABPC1-216ENST00000520868 ARHGEF19Q8IW93 802 aa6.59□□□□□ -1.35
PABPC1-216ENST00000520868 CTCFLQ8NI51 663 aaPredicted RBP6.59□□□□□ -1.35
PABPC1-216ENST00000520868 EXOC6Q8TAG9 804 aa6.59□□□□□ -1.35
PABPC1-216ENST00000520868 SPPL3Q8TCT6 385 aa6.59□□□□□ -1.35
PABPC1-216ENST00000520868 POF1BQ8WVV4 589 aa6.59□□□□□ -1.35
PABPC1-216ENST00000520868 SMARCAD1Q9H4L7 1026 aa6.59□□□□□ -1.35
PABPC1-216ENST00000520868 PSTPIP2Q9H939 334 aa6.59□□□□□ -1.35
PABPC1-216ENST00000520868 CYP4F11Q9HBI6 524 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms