RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 PTPN4P29074 926 aa12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 RIPK1Q13546 671 aa12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 GLRA4Q5JXX5 417 aa12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 RNFT2Q96EX2 444 aa12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 SLITRK1Q96PX8 696 aa12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 ABI2Q9NYB9 513 aaPredicted RBP12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 CCDC59Q9P031 241 aaKnown RBP12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 HEATR9A2RTY3 570 aa12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 VAV1P15498 845 aa12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 RPL5P46777 297 aaKnown RBP12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 CDC16Q13042 620 aa12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 TRMT5Q32P41 509 aaKnown RBP12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 MROH9Q5TGP6 573 aa12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 DNERQ8NFT8 737 aa12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 AGXT2Q9BYV1 514 aa12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 SLITRK2Q9H156 845 aa12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 RMND5AQ9H871 391 aa12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 SLC39A10Q9ULF5 831 aa12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 ATF4P18848 351 aaPredicted RBP12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 CLCN3P51790 818 aa12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 TGFB2P61812 414 aa12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 ACAP2Q15057 778 aa12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 SETD3Q86TU7 594 aaPredicted RBP12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 OR8H2Q8N162 312 aa12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 GRPEL2Q8TAA5 225 aa12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 GLMNQ92990 594 aa12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 TUBGCP5Q96RT8 1024 aa12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 POP1Q99575 1024 aaKnown RBP12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 GPR63Q9BZJ6 419 aa12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 ARMC7Q9H6L4 198 aa12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 EIF3LQ9Y262 564 aaKnown RBP12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 ADGRB2O60241 1585 aa12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 TRPC5OSA6NMA1 111 aa12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 PIK3CDO00329 1044 aa12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 KLHL41O60662 606 aa12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 VTNP04004 478 aa12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 GZMAP12544 262 aa12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 MAPK1P28482 360 aa12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 ARHGAP15Q53QZ3 475 aa12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 UGT3A1Q6NUS8 523 aa12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 MACC1Q6ZN28 852 aa12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 ACOT1Q86TX2 421 aa12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 DGCR14Q96DF8 476 aaKnown RBP12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 MST1RQ04912 1400 aa12.4□□□□□ -0.42
ERGIC1-208ENST00000520399 EPHB2P29323 1055 aa12.4□□□□□ -0.43
ERGIC1-208ENST00000520399 CASP7P55210 303 aa12.4□□□□□ -0.43
ERGIC1-208ENST00000520399 TTC23Q5W5X9 447 aa12.4□□□□□ -0.43
ERGIC1-208ENST00000520399 ERO1BQ86YB8 467 aa12.4□□□□□ -0.43
ERGIC1-208ENST00000520399 GALNT4Q8N4A0 578 aa12.4□□□□□ -0.43
ERGIC1-208ENST00000520399 ARHGAP23Q9P227 1491 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 TRIM49D1C9J1S8 452 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 CYB561D2O14569 222 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 TARSP26639 723 aaKnown RBP12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 SHMT1P34896 483 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 SLC26A2P50443 739 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 ALDH5A1P51649 535 aaPredicted RBP12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 SPOCD1Q6ZMY3 1216 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 FBXO36Q8NEA4 188 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 CEP44Q9C0F1 390 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 PABPC3Q9H361 631 aaKnown RBP12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 RGS18Q9NS28 235 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 COQ6Q9Y2Z9 468 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 AAR2Q9Y312 384 aaKnown RBP12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 AIM2O14862 343 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 RFX3P48380 749 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 BCAT1P54687 386 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 ZNF571Q7Z3V5 609 aaPredicted RBP12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 SLC47A2Q86VL8 602 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 SYTL5Q8TDW5 730 aaPredicted RBP12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 CYLDQ9NQC7 956 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 IL17RBQ9NRM6 502 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 DDIT4Q9NX09 232 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 VPS9D1Q9Y2B5 631 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 CAPN6Q9Y6Q1 641 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 GLRA3O75311 464 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 WFS1O76024 890 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 HNMTP50135 292 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 GALK1P51570 392 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 CLCN2P51788 898 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 ITGADQ13349 1161 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 TMEM119Q4V9L6 283 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 AKIRIN2Q53H80 203 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 TRIQKQ629K1 86 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 SLFN11Q7Z7L1 901 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 CCNJLQ8IV13 435 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 HS6ST3Q8IZP7 471 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 EPS8L3Q8TE67 593 aaKnown RBP12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 FUCA2Q9BTY2 467 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 TMBIM4Q9HC24 238 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 KLHL3Q9UH77 587 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 MROH1Q8NDA8 1641 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 FBXO21O94952 628 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 IFNA14P01570 189 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 ERVK-10P10266 1014 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 EIF2S3P41091 472 aaKnown RBP12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 SLC11A2P49281 568 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 CACHD1Q5VU97 1274 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 CENPLQ8N0S6 344 aaPredicted RBP12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 FAM172AQ8WUF8 416 aa12.39□□□□□ -0.43
ERGIC1-208ENST00000520399 ATG4AQ8WYN0 398 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms