RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 TYW3Q6IPR3 259 aaKnown RBP8.9□□□□□ -0.98
CSMD1-206ENST00000520002 KCTD10Q9H3F6 313 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 MLXQ9UH92 298 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 KCNH4Q9UQ05 1017 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 NAALADL1Q9UQQ1 740 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 STON1Q9Y6Q2 735 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 CD4P01730 458 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 TMEM253P0C7T8 217 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 ACADSBP45954 432 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 PGS1Q32NB8 556 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 TUBA3EQ6PEY2 450 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.9□□□□□ -0.98
CSMD1-206ENST00000520002 NET1Q7Z628 596 aaPredicted RBP8.9□□□□□ -0.98
CSMD1-206ENST00000520002 PGBD3Q8N328 593 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 DHRSXQ8N5I4 330 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 VPS37AQ8NEZ2 397 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 STOML2Q9UJZ1 356 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 MYO5BQ9ULV0 1848 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 C2CD2LO14523 706 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 ALOX5P09917 674 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 ABL2P42684 1182 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 NUDT18Q6ZVK8 323 aa8.9□□□□□ -0.98
CSMD1-206ENST00000520002 TRMT6Q9UJA5 497 aaKnown RBP8.9□□□□□ -0.98
CSMD1-206ENST00000520002 PLOD3O60568 738 aa8.9□□□□□ -0.99
CSMD1-206ENST00000520002 NADKO95544 446 aaPredicted RBP8.9□□□□□ -0.99
CSMD1-206ENST00000520002 FASP25445 335 aa8.9□□□□□ -0.99
CSMD1-206ENST00000520002 SLC1A6P48664 564 aa8.9□□□□□ -0.99
CSMD1-206ENST00000520002 STARP49675 285 aa8.9□□□□□ -0.99
CSMD1-206ENST00000520002 RTP1P59025 263 aa8.9□□□□□ -0.99
CSMD1-206ENST00000520002 SNX17Q15036 470 aa8.9□□□□□ -0.99
CSMD1-206ENST00000520002 OCLNQ16625 522 aa8.9□□□□□ -0.99
CSMD1-206ENST00000520002 FAM117BQ6P1L5 589 aa8.9□□□□□ -0.99
CSMD1-206ENST00000520002 SLC13A5Q86YT5 568 aaPredicted RBP8.9□□□□□ -0.99
CSMD1-206ENST00000520002 ZNF75CPQ92670 426 aaPredicted RBP8.9□□□□□ -0.99
CSMD1-206ENST00000520002 SYN2Q92777 582 aaPredicted RBP8.9□□□□□ -0.99
CSMD1-206ENST00000520002 DGCR14Q96DF8 476 aaKnown RBP8.9□□□□□ -0.99
CSMD1-206ENST00000520002 MZF1P28698 734 aaPredicted RBP8.9□□□□□ -0.99
CSMD1-206ENST00000520002 CASP4P49662 377 aa8.9□□□□□ -0.99
CSMD1-206ENST00000520002 C5orf22Q49AR2 442 aa8.9□□□□□ -0.99
CSMD1-206ENST00000520002 C6orf52Q5T4I8 152 aa8.9□□□□□ -0.99
CSMD1-206ENST00000520002 NOTUMQ6P988 496 aa8.9□□□□□ -0.99
CSMD1-206ENST00000520002 STK32CQ86UX6 486 aa8.9□□□□□ -0.99
CSMD1-206ENST00000520002 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.9□□□□□ -0.99
CSMD1-206ENST00000520002 WDR36Q8NI36 951 aaKnown RBP8.9□□□□□ -0.99
CSMD1-206ENST00000520002 RNF38Q9H0F5 515 aa8.9□□□□□ -0.99
CSMD1-206ENST00000520002 GIN1Q9NXP7 522 aa8.9□□□□□ -0.99
CSMD1-206ENST00000520002 ING4Q9UNL4 249 aa8.9□□□□□ -0.99
CSMD1-206ENST00000520002 MAGEB2O15479 319 aa8.9□□□□□ -0.99
CSMD1-206ENST00000520002 EIF2S1P05198 315 aaKnown RBP8.9□□□□□ -0.99
CSMD1-206ENST00000520002 GSTM1P09488 218 aa8.9□□□□□ -0.99
CSMD1-206ENST00000520002 CDK16Q00536 496 aa8.9□□□□□ -0.99
CSMD1-206ENST00000520002 CUL2Q13617 745 aa8.9□□□□□ -0.99
CSMD1-206ENST00000520002 NFYCQ13952 458 aa8.9□□□□□ -0.99
CSMD1-206ENST00000520002 PLA2G4EQ3MJ16 856 aa8.9□□□□□ -0.99
CSMD1-206ENST00000520002 BROXQ5VW32 411 aa8.9□□□□□ -0.99
CSMD1-206ENST00000520002 ELOA2Q8IYF1 753 aaPredicted RBP8.9□□□□□ -0.99
CSMD1-206ENST00000520002 ZNF333Q96JL9 665 aa8.9□□□□□ -0.99
CSMD1-206ENST00000520002 DNAJC7Q99615 494 aa8.9□□□□□ -0.99
CSMD1-206ENST00000520002 MTMR12Q9C0I1 747 aa8.9□□□□□ -0.99
CSMD1-206ENST00000520002 EMC3Q9P0I2 261 aa8.9□□□□□ -0.99
CSMD1-206ENST00000520002 BAIAP2Q9UQB8 552 aa8.9□□□□□ -0.99
CSMD1-206ENST00000520002 PNMA8CA0A1B0GUJ8 204 aa8.89□□□□□ -0.99
CSMD1-206ENST00000520002 SDR42E2A6NKP2 422 aa8.89□□□□□ -0.99
CSMD1-206ENST00000520002 ANTXR2P58335 489 aa8.89□□□□□ -0.99
CSMD1-206ENST00000520002 RHAGQ02094 409 aa8.89□□□□□ -0.99
CSMD1-206ENST00000520002 OR8H3Q8N146 312 aa8.89□□□□□ -0.99
CSMD1-206ENST00000520002 L3MBTL3Q96JM7 780 aaPredicted RBP8.89□□□□□ -0.99
CSMD1-206ENST00000520002 OSBPL6Q9BZF3 934 aa8.89□□□□□ -0.99
CSMD1-206ENST00000520002 VPS33BQ9H267 617 aa8.89□□□□□ -0.99
CSMD1-206ENST00000520002 VPS9D1Q9Y2B5 631 aa8.89□□□□□ -0.99
CSMD1-206ENST00000520002 FAM92AA1XBS5 289 aa8.89□□□□□ -0.99
CSMD1-206ENST00000520002 LDLRP01130 860 aa8.89□□□□□ -0.99
CSMD1-206ENST00000520002 HARS2P49590 506 aaKnown RBP8.89□□□□□ -0.99
CSMD1-206ENST00000520002 ERVK-9P63128 1117 aa8.89□□□□□ -0.99
CSMD1-206ENST00000520002 SLC25A3Q00325 362 aa8.89□□□□□ -0.99
CSMD1-206ENST00000520002 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.89□□□□□ -0.99
CSMD1-206ENST00000520002 DDR1Q08345 913 aa8.89□□□□□ -0.99
CSMD1-206ENST00000520002 UBAP2LQ14157 1087 aaKnown RBP8.89□□□□□ -0.99
CSMD1-206ENST00000520002 NFIXQ14938 502 aa8.89□□□□□ -0.99
CSMD1-206ENST00000520002 PHC3Q8NDX5 983 aa8.89□□□□□ -0.99
CSMD1-206ENST00000520002 SPATA16Q9BXB7 569 aa8.89□□□□□ -0.99
CSMD1-206ENST00000520002 AVENQ9NQS1 362 aaPredicted RBP8.89□□□□□ -0.99
CSMD1-206ENST00000520002 PRR12Q9ULL5 1215 aa8.89□□□□□ -0.99
CSMD1-206ENST00000520002 PRR23AA6NEV1 266 aa8.89□□□□□ -0.99
CSMD1-206ENST00000520002 H2AFYO75367 372 aaKnown RBP8.89□□□□□ -0.99
CSMD1-206ENST00000520002 RUNDC3AQ59EK9 446 aa8.89□□□□□ -0.99
CSMD1-206ENST00000520002 BRINP3Q76B58 766 aa8.89□□□□□ -0.99
CSMD1-206ENST00000520002 CAMKK1Q8N5S9 505 aa8.89□□□□□ -0.99
CSMD1-206ENST00000520002 BPIFB6Q8NFQ5 453 aa8.89□□□□□ -0.99
CSMD1-206ENST00000520002 CDRT15Q96T59 188 aa8.89□□□□□ -0.99
CSMD1-206ENST00000520002 TMEM39BQ9GZU3 492 aa8.89□□□□□ -0.99
CSMD1-206ENST00000520002 APOA4P06727 396 aa8.89□□□□□ -0.99
CSMD1-206ENST00000520002 MAGEA10P43363 369 aaPredicted RBP8.89□□□□□ -0.99
CSMD1-206ENST00000520002 TSNQ15631 228 aaKnown RBP8.89□□□□□ -0.99
CSMD1-206ENST00000520002 C16orf86Q6ZW13 317 aa8.89□□□□□ -0.99
CSMD1-206ENST00000520002 EFL1Q7Z2Z2 1120 aaKnown RBP8.89□□□□□ -0.99
CSMD1-206ENST00000520002 KCNH7Q9NS40 1196 aa8.89□□□□□ -0.99
CSMD1-206ENST00000520002 ARPC4-TTLL3A0A0A6YYG9 625 aa8.89□□□□□ -0.99
CSMD1-206ENST00000520002 RIPK2O43353 540 aa8.89□□□□□ -0.99
CSMD1-206ENST00000520002 TRMUO75648 421 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms