RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 ZNF512Q96ME7 567 aaPredicted RBP12.8□□□□□ -0.36
SPIDR-209ENST00000519141 HAPLN3Q96S86 360 aa12.8□□□□□ -0.36
SPIDR-209ENST00000519141 FMO2Q99518 471 aa12.8□□□□□ -0.36
SPIDR-209ENST00000519141 OSBPL2Q9H1P3 480 aa12.8□□□□□ -0.36
SPIDR-209ENST00000519141 ENTPD7Q9NQZ7 604 aa12.8□□□□□ -0.36
SPIDR-209ENST00000519141 ZDHHC18Q9NUE0 388 aa12.8□□□□□ -0.36
SPIDR-209ENST00000519141 MARCH2Q9P0N8 246 aa12.8□□□□□ -0.36
SPIDR-209ENST00000519141 MTRF1LQ9UGC7 380 aaKnown RBP12.8□□□□□ -0.36
SPIDR-209ENST00000519141 OR12D3Q9UGF7 316 aa12.8□□□□□ -0.36
SPIDR-209ENST00000519141 FAM153AQ9UHL3 310 aa12.8□□□□□ -0.36
SPIDR-209ENST00000519141 GBF1Q92538 1859 aa12.8□□□□□ -0.36
SPIDR-209ENST00000519141 LINC01553A4QN01 128 aa12.8□□□□□ -0.36
SPIDR-209ENST00000519141 CFAP69A5D8W1 941 aa12.8□□□□□ -0.36
SPIDR-209ENST00000519141 TLR5O60602 858 aa12.8□□□□□ -0.36
SPIDR-209ENST00000519141 PAGE1O75459 146 aa12.8□□□□□ -0.36
SPIDR-209ENST00000519141 CXCL14O95715 111 aa12.8□□□□□ -0.36
SPIDR-209ENST00000519141 APOEP02649 317 aa12.8□□□□□ -0.36
SPIDR-209ENST00000519141 HMGA1P17096 107 aaKnown RBP12.8□□□□□ -0.36
SPIDR-209ENST00000519141 GBE1Q04446 702 aa12.8□□□□□ -0.36
SPIDR-209ENST00000519141 TWF1Q12792 350 aa12.8□□□□□ -0.36
SPIDR-209ENST00000519141 PLD1Q13393 1074 aa12.8□□□□□ -0.36
SPIDR-209ENST00000519141 XRCC4Q13426 336 aa12.8□□□□□ -0.36
SPIDR-209ENST00000519141 TRIP4Q15650 581 aaPredicted RBP12.8□□□□□ -0.36
SPIDR-209ENST00000519141 ZDHHC24Q6UX98 284 aa12.8□□□□□ -0.36
SPIDR-209ENST00000519141 PDZD4Q76G19 769 aaPredicted RBP12.8□□□□□ -0.36
SPIDR-209ENST00000519141 BZW1Q7L1Q6 419 aaKnown RBP12.8□□□□□ -0.36
SPIDR-209ENST00000519141 CDKL3Q8IVW4 592 aaPredicted RBP12.8□□□□□ -0.36
SPIDR-209ENST00000519141 FBXO25Q8TCJ0 367 aa12.8□□□□□ -0.36
SPIDR-209ENST00000519141 TRMT2BQ96GJ1 504 aaKnown RBP12.8□□□□□ -0.36
SPIDR-209ENST00000519141 MYRFLQ96LU7 910 aa12.8□□□□□ -0.36
SPIDR-209ENST00000519141 TCF25Q9BQ70 676 aa12.8□□□□□ -0.36
SPIDR-209ENST00000519141 EMILIN2Q9BXX0 1053 aa12.8□□□□□ -0.36
SPIDR-209ENST00000519141 ALG13Q9NP73 1137 aaKnown RBP12.8□□□□□ -0.36
SPIDR-209ENST00000519141 ETNK2Q9NVF9 386 aa12.8□□□□□ -0.36
SPIDR-209ENST00000519141 SNX10Q9Y5X0 201 aa12.8□□□□□ -0.36
SPIDR-209ENST00000519141 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.79□□□□□ -0.36
SPIDR-209ENST00000519141 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.79□□□□□ -0.36
SPIDR-209ENST00000519141 NDC80O14777 642 aa12.79□□□□□ -0.36
SPIDR-209ENST00000519141 MFSD11O43934 449 aa12.79□□□□□ -0.36
SPIDR-209ENST00000519141 LRIG2O94898 1065 aa12.79□□□□□ -0.36
SPIDR-209ENST00000519141 MOCS2O96007 188 aaPredicted RBP12.79□□□□□ -0.36
SPIDR-209ENST00000519141 ITIH2P19823 946 aa12.79□□□□□ -0.36
SPIDR-209ENST00000519141 STIP1P31948 543 aaKnown RBP12.79□□□□□ -0.36
SPIDR-209ENST00000519141 HTR7P34969 479 aa12.79□□□□□ -0.36
SPIDR-209ENST00000519141 GDF10P55107 478 aa12.79□□□□□ -0.36
SPIDR-209ENST00000519141 CAV1Q03135 178 aa12.79□□□□□ -0.36
SPIDR-209ENST00000519141 P3H1Q32P28 736 aa12.79□□□□□ -0.36
SPIDR-209ENST00000519141 PRUNE1Q86TP1 453 aa12.79□□□□□ -0.36
SPIDR-209ENST00000519141 ITIH5Q86UX2 942 aa12.79□□□□□ -0.36
SPIDR-209ENST00000519141 MIB1Q86YT6 1006 aa12.79□□□□□ -0.36
SPIDR-209ENST00000519141 UNC45BQ8IWX7 931 aa12.79□□□□□ -0.36
SPIDR-209ENST00000519141 ZNF276Q8N554 614 aa12.79□□□□□ -0.36
SPIDR-209ENST00000519141 FAM71DQ8N9W8 422 aa12.79□□□□□ -0.36
SPIDR-209ENST00000519141 GLIS1Q8NBF1 620 aa12.79□□□□□ -0.36
SPIDR-209ENST00000519141 ART4Q93070 314 aa12.79□□□□□ -0.36
SPIDR-209ENST00000519141 LRRC45Q96CN5 670 aa12.79□□□□□ -0.36
SPIDR-209ENST00000519141 SLC39A13Q96H72 371 aa12.79□□□□□ -0.36
SPIDR-209ENST00000519141 FCRL2Q96LA5 508 aaPredicted RBP12.79□□□□□ -0.36
SPIDR-209ENST00000519141 FAM161BQ96MY7 647 aa12.79□□□□□ -0.36
SPIDR-209ENST00000519141 SIK2Q9H0K1 926 aa12.79□□□□□ -0.36
SPIDR-209ENST00000519141 CCSER2Q9H7U1 834 aa12.79□□□□□ -0.36
SPIDR-209ENST00000519141 C10orf88Q9H8K7 445 aa12.79□□□□□ -0.36
SPIDR-209ENST00000519141 DTLQ9NZJ0 730 aa12.79□□□□□ -0.36
SPIDR-209ENST00000519141 TRPM5Q9NZQ8 1165 aa12.79□□□□□ -0.36
SPIDR-209ENST00000519141 MFHAS1Q9Y4C4 1052 aa12.79□□□□□ -0.36
SPIDR-209ENST00000519141 TRANK1O15050 2925 aa12.79□□□□□ -0.36
SPIDR-209ENST00000519141 XIRP2A4UGR9 3374 aa12.79□□□□□ -0.36
SPIDR-209ENST00000519141 SLC12A8A0AV02 714 aa12.78□□□□□ -0.36
SPIDR-209ENST00000519141 KCNU1A8MYU2 1149 aa12.78□□□□□ -0.36
SPIDR-209ENST00000519141 MAP2K7O14733 419 aa12.78□□□□□ -0.36
SPIDR-209ENST00000519141 DCLK1O15075 740 aa12.78□□□□□ -0.36
SPIDR-209ENST00000519141 TGM5O43548 720 aa12.78□□□□□ -0.36
SPIDR-209ENST00000519141 SASH3O75995 380 aa12.78□□□□□ -0.36
SPIDR-209ENST00000519141 MAP3K6O95382 1288 aa12.78□□□□□ -0.36
SPIDR-209ENST00000519141 TBX18O95935 607 aa12.78□□□□□ -0.36
SPIDR-209ENST00000519141 ETS1P14921 441 aa12.78□□□□□ -0.36
SPIDR-209ENST00000519141 ERCC2P18074 760 aa12.78□□□□□ -0.36
SPIDR-209ENST00000519141 IVDP26440 423 aa12.78□□□□□ -0.36
SPIDR-209ENST00000519141 EPHB2P29323 1055 aa12.78□□□□□ -0.36
SPIDR-209ENST00000519141 GGCXP38435 758 aa12.78□□□□□ -0.36
SPIDR-209ENST00000519141 KPNA1P52294 538 aaPredicted RBP12.78□□□□□ -0.36
SPIDR-209ENST00000519141 UBE3AQ05086 875 aa12.78□□□□□ -0.36
SPIDR-209ENST00000519141 GPS1Q13098 491 aa12.78□□□□□ -0.36
SPIDR-209ENST00000519141 PAFAH1B3Q15102 231 aaKnown RBP12.78□□□□□ -0.36
SPIDR-209ENST00000519141 SLC45A4Q5BKX6 768 aa12.78□□□□□ -0.36
SPIDR-209ENST00000519141 ZNF697Q5TEC3 545 aa12.78□□□□□ -0.36
SPIDR-209ENST00000519141 SNX30Q5VWJ9 437 aa12.78□□□□□ -0.36
SPIDR-209ENST00000519141 IZUMO3Q5VZ72 239 aa12.78□□□□□ -0.36
SPIDR-209ENST00000519141 MREGQ8N565 214 aa12.78□□□□□ -0.36
SPIDR-209ENST00000519141 ATP6V0D2Q8N8Y2 350 aa12.78□□□□□ -0.36
SPIDR-209ENST00000519141 PSMG2Q969U7 264 aa12.78□□□□□ -0.36
SPIDR-209ENST00000519141 GUCD1Q96NT3 240 aa12.78□□□□□ -0.36
SPIDR-209ENST00000519141 OLFM3Q96PB7 478 aa12.78□□□□□ -0.36
SPIDR-209ENST00000519141 KLHL5Q96PQ7 755 aa12.78□□□□□ -0.36
SPIDR-209ENST00000519141 QKIQ96PU8 341 aaKnown RBP eCLIP12.78□□□□□ -0.36
SPIDR-209ENST00000519141 C17orf80Q9BSJ5 609 aa12.78□□□□□ -0.36
SPIDR-209ENST00000519141 NACA2Q9H009 215 aa12.78□□□□□ -0.36
SPIDR-209ENST00000519141 TTYH1Q9H313 450 aaPredicted RBP12.78□□□□□ -0.36
SPIDR-209ENST00000519141 ACBD3Q9H3P7 528 aa12.78□□□□□ -0.36
SPIDR-209ENST00000519141 TLR9Q9NR96 1032 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms