RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 KIF5BP33176 963 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 GUCY1A2P33402 732 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 MAGEA10P43363 369 aaPredicted RBP7.69□□□□□ -1.18
CLK4-202ENST00000519132 SLC6A11P48066 632 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 NLRP5P59047 1200 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 LRMPQ12912 555 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 DCTN2Q13561 401 aaKnown RBP7.69□□□□□ -1.18
CLK4-202ENST00000519132 MCMDC2Q4G0Z9 681 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 FAM114A1Q8IWE2 563 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 NAT8LQ8N9F0 302 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 SUPT20HQ8NEM7 779 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 KBTBD7Q8WVZ9 684 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 C3orf49Q96BT1 292 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 COA1Q9GZY4 146 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 VPS16Q9H269 839 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 IL25Q9H293 177 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 GALNT8Q9NY28 637 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 KCMF1Q9P0J7 381 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 EIF2B4Q9UI10 523 aaKnown RBP7.69□□□□□ -1.18
CLK4-202ENST00000519132 ATP11BQ9Y2G3 1177 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 ZNF711Q9Y462 761 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 A0A0D9SFI3 127 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 ZNF839A8K0R7 811 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 TGFB1I1O43294 461 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 GNAT2P19087 354 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 IL1R2P27930 398 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 PAPOLAP51003 745 aaKnown RBP7.69□□□□□ -1.18
CLK4-202ENST00000519132 CYP27C1Q4G0S4 372 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 SMUG1Q53HV7 270 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 FCRL6Q6DN72 434 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 MFSD6Q6ZSS7 791 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 SLC51AQ86UW1 340 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 SLC44A2Q8IWA5 706 aaPredicted RBP7.69□□□□□ -1.18
CLK4-202ENST00000519132 ERMNQ8TAM6 284 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 SUN5Q8TC36 379 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 ZNF75CPQ92670 426 aaPredicted RBP7.69□□□□□ -1.18
CLK4-202ENST00000519132 C1orf74Q96LT6 269 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 FAM227BQ96M60 508 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 RTKNQ9BST9 563 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 CD209Q9NNX6 404 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 PIH1D3Q9NQM4 214 aaKnown RBP7.69□□□□□ -1.18
CLK4-202ENST00000519132 PSD3Q9NYI0 1048 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 PIM2Q9P1W9 311 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 ARHGAP20Q9P2F6 1191 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 TNFRSF10DQ9UBN6 386 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 FAM205AQ6ZU69 1335 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 HNRNPDLO14979 420 aaKnown RBP7.69□□□□□ -1.18
CLK4-202ENST00000519132 HNRNPCP07910 306 aaKnown RBP eCLIP7.69□□□□□ -1.18
CLK4-202ENST00000519132 ARP10275 920 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 HARS2P49590 506 aaKnown RBP7.69□□□□□ -1.18
CLK4-202ENST00000519132 PPP5CP53041 499 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 CCDC173Q0VFZ6 552 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 RABEP1Q15276 862 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 RCN1Q15293 331 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 RPUSD3Q6P087 351 aaKnown RBP7.69□□□□□ -1.18
CLK4-202ENST00000519132 SEPT14Q6ZU15 432 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 GATAD2AQ86YP4 633 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 RTKN2Q8IZC4 609 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 NEIL1Q96FI4 390 aaPredicted RBP7.69□□□□□ -1.18
CLK4-202ENST00000519132 LBHD1Q9BQE6 289 aaPredicted RBP7.69□□□□□ -1.18
CLK4-202ENST00000519132 LSG1Q9H089 658 aaKnown RBP7.69□□□□□ -1.18
CLK4-202ENST00000519132 MMADHCQ9H3L0 296 aaPredicted RBP7.69□□□□□ -1.18
CLK4-202ENST00000519132 ABHD16BQ9H3Z7 469 aa7.69□□□□□ -1.18
CLK4-202ENST00000519132 MYH2Q9UKX2 1941 aa7.68□□□□□ -1.18
CLK4-202ENST00000519132 VPS4BO75351 444 aa7.68□□□□□ -1.18
CLK4-202ENST00000519132 TGDSO95455 350 aa7.68□□□□□ -1.18
CLK4-202ENST00000519132 HSPA1AP0DMV8 641 aaKnown RBP7.68□□□□□ -1.18
CLK4-202ENST00000519132 HSPA1BP0DMV9 641 aaKnown RBP7.68□□□□□ -1.18
CLK4-202ENST00000519132 GAAP10253 952 aa7.68□□□□□ -1.18
CLK4-202ENST00000519132 U2AF2P26368 475 aaKnown RBP eCLIP7.68□□□□□ -1.181e-7■□□□□ 8
CLK4-202ENST00000519132 PTPN7P35236 360 aa7.68□□□□□ -1.18
CLK4-202ENST00000519132 HSD17B7P56937 341 aa7.68□□□□□ -1.18
CLK4-202ENST00000519132 SESN2P58004 480 aaPredicted RBP7.68□□□□□ -1.18
CLK4-202ENST00000519132 TARBP2Q15633 366 aaKnown RBP7.68□□□□□ -1.18
CLK4-202ENST00000519132 CNGA3Q16281 694 aa7.68□□□□□ -1.18
CLK4-202ENST00000519132 CR1LQ2VPA4 569 aa7.68□□□□□ -1.18
CLK4-202ENST00000519132 AFMIDQ63HM1 303 aa7.68□□□□□ -1.18
CLK4-202ENST00000519132 SIAH1Q8IUQ4 282 aa7.68□□□□□ -1.18
CLK4-202ENST00000519132 STPG3Q8N7X2 389 aa7.68□□□□□ -1.18
CLK4-202ENST00000519132 SNX33Q8WV41 574 aa7.68□□□□□ -1.18
CLK4-202ENST00000519132 DDX23Q9BUQ8 820 aaKnown RBP7.68□□□□□ -1.18
CLK4-202ENST00000519132 MECRQ9BV79 373 aa7.68□□□□□ -1.18
CLK4-202ENST00000519132 OSBPL10Q9BXB5 764 aa7.68□□□□□ -1.18
CLK4-202ENST00000519132 MS4A7Q9GZW8 240 aaPredicted RBP7.68□□□□□ -1.18
CLK4-202ENST00000519132 AP5M1Q9H0R1 490 aa7.68□□□□□ -1.18
CLK4-202ENST00000519132 HEYLQ9NQ87 328 aaPredicted RBP7.68□□□□□ -1.18
CLK4-202ENST00000519132 KCTD5Q9NXV2 234 aa7.68□□□□□ -1.18
CLK4-202ENST00000519132 ZC3H7BQ9UGR2 993 aaKnown RBP7.68□□□□□ -1.18
CLK4-202ENST00000519132 SCN9AQ15858 1988 aa7.68□□□□□ -1.18
CLK4-202ENST00000519132 CCDC171Q6TFL3 1326 aa7.68□□□□□ -1.18
CLK4-202ENST00000519132 A0A0G2JLW4 131 aa7.68□□□□□ -1.18
CLK4-202ENST00000519132 NUDT19A8MXV4 375 aa7.68□□□□□ -1.18
CLK4-202ENST00000519132 M0QYG6 137 aa7.68□□□□□ -1.18
CLK4-202ENST00000519132 APEX1P27695 318 aaKnown RBP7.68□□□□□ -1.18
CLK4-202ENST00000519132 MLH1P40692 756 aa7.68□□□□□ -1.18
CLK4-202ENST00000519132 HDAC4P56524 1084 aa7.68□□□□□ -1.18
CLK4-202ENST00000519132 PRAMEF14Q5SWL7 426 aa7.68□□□□□ -1.18
CLK4-202ENST00000519132 LCE2AQ5TA79 106 aaPredicted RBP7.68□□□□□ -1.18
CLK4-202ENST00000519132 TMEM151BQ8IW70 566 aa7.68□□□□□ -1.18
CLK4-202ENST00000519132 VPS52Q8N1B4 723 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms