RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 PTCHD3Q3KNS1 767 aa6.4□□□□□ -1.38
SQLE-203ENST00000518931 KRTCAP3Q53RY4 240 aa6.4□□□□□ -1.38
SQLE-203ENST00000518931 TAF3Q5VWG9 929 aa6.4□□□□□ -1.38
SQLE-203ENST00000518931 SLC9B2Q86UD5 537 aa6.4□□□□□ -1.38
SQLE-203ENST00000518931 SLC15A3Q8IY34 581 aa6.4□□□□□ -1.38
SQLE-203ENST00000518931 GALNT15Q8N3T1 639 aa6.4□□□□□ -1.38
SQLE-203ENST00000518931 TSPYL6Q8N831 410 aa6.4□□□□□ -1.38
SQLE-203ENST00000518931 NAT8LQ8N9F0 302 aa6.4□□□□□ -1.38
SQLE-203ENST00000518931 BPIFB1Q8TDL5 484 aa6.4□□□□□ -1.38
SQLE-203ENST00000518931 ATG4AQ8WYN0 398 aa6.4□□□□□ -1.38
SQLE-203ENST00000518931 RFFLQ8WZ73 363 aa6.4□□□□□ -1.38
SQLE-203ENST00000518931 RFKQ969G6 155 aa6.4□□□□□ -1.38
SQLE-203ENST00000518931 PBKQ96KB5 322 aa6.4□□□□□ -1.38
SQLE-203ENST00000518931 MSLNLQ96KJ4 702 aa6.4□□□□□ -1.38
SQLE-203ENST00000518931 PPP1R9BQ96SB3 815 aa6.4□□□□□ -1.38
SQLE-203ENST00000518931 EYA3Q99504 573 aa6.4□□□□□ -1.38
SQLE-203ENST00000518931 SLX1AQ9BQ83 275 aa6.4□□□□□ -1.38
SQLE-203ENST00000518931 GPATCH1Q9BRR8 931 aaKnown RBP6.4□□□□□ -1.38
SQLE-203ENST00000518931 DESI2Q9BSY9 194 aa6.4□□□□□ -1.38
SQLE-203ENST00000518931 EDEM3Q9BZQ6 932 aa6.4□□□□□ -1.38
SQLE-203ENST00000518931 ARHGAP39Q9C0H5 1083 aa6.4□□□□□ -1.38
SQLE-203ENST00000518931 CHST8Q9H2A9 424 aa6.4□□□□□ -1.38
SQLE-203ENST00000518931 SYNPO2LQ9H987 977 aa6.4□□□□□ -1.38
SQLE-203ENST00000518931 HAUS2Q9NVX0 235 aa6.4□□□□□ -1.38
SQLE-203ENST00000518931 EHD3Q9NZN3 535 aa6.4□□□□□ -1.38
SQLE-203ENST00000518931 SUN2Q9UH99 717 aa6.4□□□□□ -1.38
SQLE-203ENST00000518931 FBXL5Q9UKA1 691 aa6.4□□□□□ -1.38
SQLE-203ENST00000518931 ZFP37Q9Y6Q3 630 aaPredicted RBP6.4□□□□□ -1.38
SQLE-203ENST00000518931 ATAD2BQ9ULI0 1458 aa6.4□□□□□ -1.39
SQLE-203ENST00000518931 ABCC9O60706 1549 aa6.4□□□□□ -1.39
SQLE-203ENST00000518931 MGST3O14880 152 aa6.39□□□□□ -1.39
SQLE-203ENST00000518931 SLC16A3O15427 465 aaKnown RBP6.39□□□□□ -1.39
SQLE-203ENST00000518931 NCK2O43639 380 aa6.39□□□□□ -1.39
SQLE-203ENST00000518931 URI1O94763 535 aaPredicted RBP6.39□□□□□ -1.39
SQLE-203ENST00000518931 TGDSO95455 350 aa6.39□□□□□ -1.39
SQLE-203ENST00000518931 GUCA1CO95843 209 aa6.39□□□□□ -1.39
SQLE-203ENST00000518931 CSF1RP07333 972 aa6.39□□□□□ -1.39
SQLE-203ENST00000518931 ELFN1P0C7U0 828 aa6.39□□□□□ -1.39
SQLE-203ENST00000518931 SCG2P13521 617 aa6.39□□□□□ -1.39
SQLE-203ENST00000518931 ZFXP17010 805 aaPredicted RBP6.39□□□□□ -1.39
SQLE-203ENST00000518931 IL4RP24394 825 aa6.39□□□□□ -1.39
SQLE-203ENST00000518931 ADORA2AP29274 412 aa6.39□□□□□ -1.39
SQLE-203ENST00000518931 MSH2P43246 934 aa6.39□□□□□ -1.39
SQLE-203ENST00000518931 ARF3P61204 181 aaPredicted RBP6.39□□□□□ -1.39
SQLE-203ENST00000518931 ARF1P84077 181 aaKnown RBP6.39□□□□□ -1.39
SQLE-203ENST00000518931 TLE2Q04725 743 aa6.39□□□□□ -1.39
SQLE-203ENST00000518931 TRPC3Q13507 836 aa6.39□□□□□ -1.39
SQLE-203ENST00000518931 RASA2Q15283 850 aa6.39□□□□□ -1.39
SQLE-203ENST00000518931 TAF5Q15542 800 aa6.39□□□□□ -1.39
SQLE-203ENST00000518931 INSCQ1MX18 579 aa6.39□□□□□ -1.39
SQLE-203ENST00000518931 ARL13BQ3SXY8 428 aa6.39□□□□□ -1.39
SQLE-203ENST00000518931 FBXO47Q5MNV8 452 aa6.39□□□□□ -1.39
SQLE-203ENST00000518931 UNC13DQ70J99 1090 aa6.39□□□□□ -1.39
SQLE-203ENST00000518931 RUFY3Q7L099 469 aa6.39□□□□□ -1.39
SQLE-203ENST00000518931 MAVSQ7Z434 540 aa6.39□□□□□ -1.39
SQLE-203ENST00000518931 NUP93Q8N1F7 819 aa6.39□□□□□ -1.39
SQLE-203ENST00000518931 AVL9Q8NBF6 648 aa6.39□□□□□ -1.39
SQLE-203ENST00000518931 SIMC1Q8NDZ2 872 aa6.39□□□□□ -1.39
SQLE-203ENST00000518931 BICD2Q8TD16 824 aa6.39□□□□□ -1.39
SQLE-203ENST00000518931 ADAMTS15Q8TE58 950 aa6.39□□□□□ -1.39
SQLE-203ENST00000518931 BRI3BPQ8WY22 251 aa6.39□□□□□ -1.39
SQLE-203ENST00000518931 CCDC43Q96MW1 224 aaKnown RBP6.39□□□□□ -1.39
SQLE-203ENST00000518931 GSDMAQ96QA5 445 aa6.39□□□□□ -1.39
SQLE-203ENST00000518931 UNKQ9C0B0 810 aaKnown RBP6.39□□□□□ -1.39
SQLE-203ENST00000518931 GHITMQ9H3K2 345 aa6.39□□□□□ -1.39
SQLE-203ENST00000518931 GBA2Q9HCG7 927 aaPredicted RBP6.39□□□□□ -1.39
SQLE-203ENST00000518931 TRMT1Q9NXH9 659 aaKnown RBP6.39□□□□□ -1.39
SQLE-203ENST00000518931 GRHPRQ9UBQ7 328 aa6.39□□□□□ -1.39
SQLE-203ENST00000518931 TBC1D29Q9UFV1 150 aa6.39□□□□□ -1.39
SQLE-203ENST00000518931 ZNHIT2Q9UHR6 403 aa6.39□□□□□ -1.39
SQLE-203ENST00000518931 ST3GAL5Q9UNP4 418 aa6.39□□□□□ -1.39
SQLE-203ENST00000518931 ZNF711Q9Y462 761 aa6.39□□□□□ -1.39
SQLE-203ENST00000518931 CCDC196A0A1B0GTZ2 297 aa6.38□□□□□ -1.39
SQLE-203ENST00000518931 LOC102723971A0A1B0GUV8 181 aa6.38□□□□□ -1.39
SQLE-203ENST00000518931 C2orf81A6NN90 581 aa6.38□□□□□ -1.39
SQLE-203ENST00000518931 H0Y626 953 aa6.38□□□□□ -1.39
SQLE-203ENST00000518931 H7C4K7 107 aa6.38□□□□□ -1.39
SQLE-203ENST00000518931 KPNA5O15131 536 aa6.38□□□□□ -1.39
SQLE-203ENST00000518931 COQ9O75208 318 aa6.38□□□□□ -1.39
SQLE-203ENST00000518931 SRGAP2BP0DMP2 458 aa6.38□□□□□ -1.39
SQLE-203ENST00000518931 NEFHP12036 1026 aa6.38□□□□□ -1.39
SQLE-203ENST00000518931 VEGFAP15692 232 aaPredicted RBP6.38□□□□□ -1.39
SQLE-203ENST00000518931 BMP5P22003 454 aa6.38□□□□□ -1.39
SQLE-203ENST00000518931 AP1B1Q10567 949 aa6.38□□□□□ -1.39
SQLE-203ENST00000518931 FOXO1Q12778 655 aa6.38□□□□□ -1.39
SQLE-203ENST00000518931 BMPR2Q13873 1038 aa6.38□□□□□ -1.39
SQLE-203ENST00000518931 SLC29A2Q14542 456 aa6.38□□□□□ -1.39
SQLE-203ENST00000518931 WTAPQ15007 396 aa6.38□□□□□ -1.39
SQLE-203ENST00000518931 ANKRD1Q15327 319 aa6.38□□□□□ -1.39
SQLE-203ENST00000518931 TREML2Q5T2D2 321 aa6.38□□□□□ -1.39
SQLE-203ENST00000518931 DEPDC1Q5TB30 811 aa6.38□□□□□ -1.39
SQLE-203ENST00000518931 KDELC1Q6UW63 502 aa6.38□□□□□ -1.39
SQLE-203ENST00000518931 KCTD20Q7Z5Y7 419 aa6.38□□□□□ -1.39
SQLE-203ENST00000518931 GALNT7Q86SF2 657 aa6.38□□□□□ -1.39
SQLE-203ENST00000518931 ZNF619Q8N2I2 560 aa6.38□□□□□ -1.39
SQLE-203ENST00000518931 LRRC71Q8N4P6 559 aa6.38□□□□□ -1.39
SQLE-203ENST00000518931 TMEM171Q8WVE6 324 aa6.38□□□□□ -1.39
SQLE-203ENST00000518931 ZNF606Q8WXB4 792 aa6.38□□□□□ -1.39
SQLE-203ENST00000518931 GLG1Q92896 1179 aa6.38□□□□□ -1.39
SQLE-203ENST00000518931 RBM18Q96H35 190 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms