RNA–Protein interactions for RNA: ENST00000518560.1

TTC1-202, Transcript of tetratricopeptide repeat domain 1, humanhuman

TSL 5

Gene TTC1, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-202ENST00000518560 WASH3PC4AMC7 463 aa10.1□□□□□ -0.79
TTC1-202ENST00000518560 PSMA7O14818 248 aa10.1□□□□□ -0.79
TTC1-202ENST00000518560 RALAP11233 206 aa10.1□□□□□ -0.79
TTC1-202ENST00000518560 HOXB2P14652 356 aa10.1□□□□□ -0.79
TTC1-202ENST00000518560 GABRG2P18507 467 aa10.1□□□□□ -0.79
TTC1-202ENST00000518560 BRD2P25440 801 aaKnown RBP10.1□□□□□ -0.79
TTC1-202ENST00000518560 P2RY2P41231 377 aa10.1□□□□□ -0.79
TTC1-202ENST00000518560 TNFRSF4P43489 277 aa10.1□□□□□ -0.79
TTC1-202ENST00000518560 DHPSP49366 369 aaPredicted RBP10.1□□□□□ -0.79
TTC1-202ENST00000518560 RGS7P49802 495 aa10.1□□□□□ -0.79
TTC1-202ENST00000518560 YWHAGP61981 247 aaKnown RBP eCLIP10.1□□□□□ -0.79
TTC1-202ENST00000518560 ADIGQ0VDE8 80 aa10.1□□□□□ -0.79
TTC1-202ENST00000518560 CLN3Q13286 438 aa10.1□□□□□ -0.79
TTC1-202ENST00000518560 USP39Q53GS9 565 aaKnown RBP10.1□□□□□ -0.79
TTC1-202ENST00000518560 SGO2Q562F6 1265 aa10.1□□□□□ -0.79
TTC1-202ENST00000518560 EOGTQ5NDL2 527 aa10.1□□□□□ -0.79
TTC1-202ENST00000518560 C1orf229Q6ZS94 237 aaPredicted RBP10.1□□□□□ -0.79
TTC1-202ENST00000518560 CYP2U1Q7Z449 544 aa10.1□□□□□ -0.79
TTC1-202ENST00000518560 DENND1CQ8IV53 801 aa10.1□□□□□ -0.79
TTC1-202ENST00000518560 TMEFF1Q8IYR6 380 aa10.1□□□□□ -0.79
TTC1-202ENST00000518560 PGBD3Q8N328 593 aa10.1□□□□□ -0.79
TTC1-202ENST00000518560 DEFB119Q8N690 84 aa10.1□□□□□ -0.79
TTC1-202ENST00000518560 ANKRD52Q8NB46 1076 aa10.1□□□□□ -0.79
TTC1-202ENST00000518560 OLIG1Q8TAK6 271 aa10.1□□□□□ -0.79
TTC1-202ENST00000518560 EDEM1Q92611 657 aa10.1□□□□□ -0.79
TTC1-202ENST00000518560 CACNA2D2Q9NY47 1150 aa10.1□□□□□ -0.79
TTC1-202ENST00000518560 MARK1Q9P0L2 795 aa10.1□□□□□ -0.79
TTC1-202ENST00000518560 MBD1Q9UIS9 605 aaPredicted RBP10.1□□□□□ -0.79
TTC1-202ENST00000518560 CLEC4EQ9ULY5 219 aa10.1□□□□□ -0.79
TTC1-202ENST00000518560 A0A1W2PQF6 199 aa10.09□□□□□ -0.79
TTC1-202ENST00000518560 O00370 1275 aa10.09□□□□□ -0.79
TTC1-202ENST00000518560 GNB5O14775 395 aa10.09□□□□□ -0.79
TTC1-202ENST00000518560 XPO1O14980 1071 aaKnown RBP10.09□□□□□ -0.79
TTC1-202ENST00000518560 MSI1O43347 362 aaKnown RBP10.09□□□□□ -0.79
TTC1-202ENST00000518560 RHOBTB1O94844 696 aa10.09□□□□□ -0.79
TTC1-202ENST00000518560 CAVIN2O95810 425 aa10.09□□□□□ -0.79
TTC1-202ENST00000518560 ZBED1O96006 694 aa10.09□□□□□ -0.79
TTC1-202ENST00000518560 CISD3P0C7P0 127 aa10.09□□□□□ -0.79
TTC1-202ENST00000518560 LCP1P13796 627 aa10.09□□□□□ -0.79
TTC1-202ENST00000518560 PTGER3P43115 390 aa10.09□□□□□ -0.79
TTC1-202ENST00000518560 PLA2G4AP47712 749 aa10.09□□□□□ -0.79
TTC1-202ENST00000518560 DGKGP49619 791 aa10.09□□□□□ -0.79
TTC1-202ENST00000518560 BCAT1P54687 386 aa10.09□□□□□ -0.79
TTC1-202ENST00000518560 GOLGA8FQ08AF8 430 aa10.09□□□□□ -0.79
TTC1-202ENST00000518560 GOLGA8DPQ0D2H9 430 aa10.09□□□□□ -0.79
TTC1-202ENST00000518560 BST2Q10589 180 aaKnown RBP10.09□□□□□ -0.79
TTC1-202ENST00000518560 STIM1Q13586 685 aa10.09□□□□□ -0.79
TTC1-202ENST00000518560 MORC3Q14149 939 aa10.09□□□□□ -0.79
TTC1-202ENST00000518560 STPG1Q5TH74 334 aa10.09□□□□□ -0.79
TTC1-202ENST00000518560 KLHDC10Q6PID8 442 aa10.09□□□□□ -0.79
TTC1-202ENST00000518560 TMEM270Q6UE05 265 aa10.09□□□□□ -0.79
TTC1-202ENST00000518560 RSRC2Q7L4I2 434 aaKnown RBP10.09□□□□□ -0.79
TTC1-202ENST00000518560 RRAGAQ7L523 313 aa10.09□□□□□ -0.79
TTC1-202ENST00000518560 CHPFQ8IZ52 775 aa10.09□□□□□ -0.79
TTC1-202ENST00000518560 PPM1KQ8N3J5 372 aa10.09□□□□□ -0.79
TTC1-202ENST00000518560 CCDC26Q8TAB7 109 aa10.09□□□□□ -0.79
TTC1-202ENST00000518560 LMO3Q8TAP4 145 aa10.09□□□□□ -0.79
TTC1-202ENST00000518560 CLEC4CQ8WTT0 213 aa10.09□□□□□ -0.79
TTC1-202ENST00000518560 PIGKQ92643 395 aa10.09□□□□□ -0.79
TTC1-202ENST00000518560 DHTKD1Q96HY7 919 aaPredicted RBP10.09□□□□□ -0.79
TTC1-202ENST00000518560 XPO6Q96QU8 1125 aaKnown RBP10.09□□□□□ -0.79
TTC1-202ENST00000518560 EDEM2Q9BV94 578 aa10.09□□□□□ -0.79
TTC1-202ENST00000518560 SUV39H2Q9H5I1 410 aa10.09□□□□□ -0.79
TTC1-202ENST00000518560 CD248Q9HCU0 757 aa10.09□□□□□ -0.79
TTC1-202ENST00000518560 FSCN3Q9NQT6 498 aa10.09□□□□□ -0.79
TTC1-202ENST00000518560 VPS45Q9NRW7 570 aa10.09□□□□□ -0.79
TTC1-202ENST00000518560 CLIC5Q9NZA1 410 aa10.09□□□□□ -0.79
TTC1-202ENST00000518560 MARCH2Q9P0N8 246 aa10.09□□□□□ -0.79
TTC1-202ENST00000518560 CALCOCO1Q9P1Z2 691 aa10.09□□□□□ -0.79
TTC1-202ENST00000518560 SFMBT1Q9UHJ3 866 aa10.09□□□□□ -0.79
TTC1-202ENST00000518560 AGO1Q9UL18 857 aaKnown RBP10.09□□□□□ -0.79
TTC1-202ENST00000518560 PCDHB4Q9Y5E5 795 aa10.09□□□□□ -0.79
TTC1-202ENST00000518560 PCDHGA5Q9Y5G8 931 aa10.09□□□□□ -0.79
TTC1-202ENST00000518560 GON4LQ3T8J9 2241 aa10.09□□□□□ -0.79
TTC1-202ENST00000518560 PCDH15Q96QU1 1955 aa10.08□□□□□ -0.8
TTC1-202ENST00000518560 LNP1A1A4G5 178 aa10.08□□□□□ -0.8
TTC1-202ENST00000518560 YJEFN3A6XGL0 299 aa10.08□□□□□ -0.8
TTC1-202ENST00000518560 E7ENQ6 273 aa10.08□□□□□ -0.8
TTC1-202ENST00000518560 M0QYV0 167 aa10.08□□□□□ -0.8
TTC1-202ENST00000518560 TSPAN3O60637 253 aa10.08□□□□□ -0.8
TTC1-202ENST00000518560 ALDH1A2O94788 518 aa10.08□□□□□ -0.8
TTC1-202ENST00000518560 SDHBP21912 280 aa10.08□□□□□ -0.8
TTC1-202ENST00000518560 NTSR1P30989 418 aa10.08□□□□□ -0.8
TTC1-202ENST00000518560 GEN1Q17RS7 908 aa10.08□□□□□ -0.8
TTC1-202ENST00000518560 MAP7D1Q3KQU3 841 aa10.08□□□□□ -0.8
TTC1-202ENST00000518560 FYB2Q5VWT5 728 aa10.08□□□□□ -0.8
TTC1-202ENST00000518560 RNF43Q68DV7 783 aa10.08□□□□□ -0.8
TTC1-202ENST00000518560 IL31Q6EBC2 164 aa10.08□□□□□ -0.8
TTC1-202ENST00000518560 CACUL1Q86Y37 369 aa10.08□□□□□ -0.8
TTC1-202ENST00000518560 FMNL3Q8IVF7 1028 aa10.08□□□□□ -0.8
TTC1-202ENST00000518560 TTC39CQ8N584 583 aa10.08□□□□□ -0.8
TTC1-202ENST00000518560 RBBP8NLQ8NC74 664 aaPredicted RBP10.08□□□□□ -0.8
TTC1-202ENST00000518560 SORCS1Q8WY21 1168 aa10.08□□□□□ -0.8
TTC1-202ENST00000518560 FAXDC2Q96IV6 333 aa10.08□□□□□ -0.8
TTC1-202ENST00000518560 CEP63Q96MT8 703 aa10.08□□□□□ -0.8
TTC1-202ENST00000518560 NT5C1BQ96P26 610 aa10.08□□□□□ -0.8
TTC1-202ENST00000518560 LRRC4Q9HBW1 653 aa10.08□□□□□ -0.8
TTC1-202ENST00000518560 GPAMQ9HCL2 828 aa10.08□□□□□ -0.8
TTC1-202ENST00000518560 TMEM74BQ9NUR3 256 aa10.08□□□□□ -0.8
TTC1-202ENST00000518560 NOP53Q9NZM5 478 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms