RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 ADAM22Q9P0K1 906 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 CPA4Q9UI42 421 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 ZMYND8Q9ULU4 1186 aaPredicted RBP-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 STXBP5LQ9Y2K9 1186 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 MAGED1Q9Y5V3 778 aaPredicted RBP-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 COL6A6A6NMZ7 2263 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 USP31Q70CQ4 1352 aa-0.84□□□□□ -2.54
SNORA40.16-201ENST00000517238 ZNF335Q9H4Z2 1342 aaPredicted RBP-0.85□□□□□ -2.54
SNORA40.16-201ENST00000517238 A1L4Q6 167 aa-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 ZNF840PA6NDX5 716 aa-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 HNRNPCL2B2RXH8 293 aa-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 SRRM5B3KS81 715 aa-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 TMEM127O75204 238 aa-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 LDHBP07195 334 aaKnown RBP-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 ASNSP08243 561 aa-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 RASSF2P50749 326 aa-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 PMS2P54278 862 aa-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 SRPK2P78362 688 aaKnown RBP-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 LRRC63Q05C16 580 aa-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 KHDRBS1Q07666 443 aaKnown RBP eCLIP-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 NSUN2Q08J23 767 aaKnown RBP eCLIP-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 GBX1Q14549 363 aa-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 ADRM1Q16186 407 aa-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 SGSM1Q2NKQ1 1148 aa-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 CELF3Q5SZQ8 465 aaKnown RBP-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 Q6P435 159 aa-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 LINC00336Q6ZUF6 198 aa-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 ANKS3Q6ZW76 656 aa-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 OTOP1Q7RTM1 612 aa-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 ADCK1Q86TW2 530 aa-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 FAM109AQ8N4B1 249 aa-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 PPM1NQ8N819 430 aa-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 PNPLA1Q8N8W4 532 aa-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 PIGKQ92643 395 aa-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 ALG14Q96F25 216 aa-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 BCANQ96GW7 911 aa-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 LMF2Q9BU23 707 aaKnown RBP-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 SMOC2Q9H3U7 446 aa-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 EPS8L2Q9H6S3 715 aa-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 CATSPERBQ9H7T0 1116 aa-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 GORASP2Q9H8Y8 452 aa-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 MOV10Q9HCE1 1003 aaKnown RBP-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 INTS10Q9NVR2 710 aaKnown RBP-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 ASIC3Q9UHC3 531 aa-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 DCTN4Q9UJW0 460 aa-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 TINAGQ9UJW2 476 aa-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 AMFRQ9UKV5 643 aa-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 PPT2Q9UMR5 302 aa-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 RUVBL1Q9Y265 456 aaKnown RBP-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 ZNF711Q9Y462 761 aa-0.85□□□□□ -2.55
SNORA40.16-201ENST00000517238 TNKSO95271 1327 aa-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 ASXL2Q76L83 1435 aa-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 IGLV7-46A0A075B6I9 117 aa-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 IGKV2-28A0A075B6P5 120 aa-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 ST20-MTHFSA0A0A6YYL1 179 aa-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 BLACEA4D250 179 aa-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 GAGE12JA6NER3 117 aa-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 A6NNZ2 444 aa-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 TEX33O43247 280 aa-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 CCNT2O60583 730 aaKnown RBP-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 SERPINI2O75830 405 aa-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 MOCS3O95396 460 aa-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 IGKV2D-28P01615 120 aa-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 PRKCBP05771 671 aa-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 ACADMP11310 421 aa-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 APEHP13798 732 aaKnown RBP-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 CTSSP25774 331 aa-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 HOXA7P31268 230 aaPredicted RBP-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 SLC5A2P31639 672 aa-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 AMTP48728 403 aa-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 KIF11P52732 1056 aa-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 POU6F2P78424 691 aaPredicted RBP-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 CDC42EP1Q00587 391 aa-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 SP2Q02086 613 aa-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 KPNB1Q14974 876 aaKnown RBP-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 NEUROD2Q15784 382 aa-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 NTRK3Q16288 839 aa-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 SYT16Q17RD7 645 aa-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 CPEB4Q17RY0 729 aaKnown RBP eCLIP-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 CCDC178Q5BJE1 867 aa-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 TMEM63BQ5T3F8 832 aa-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 MAP3K21Q5TCX8 1036 aa-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 ASPHD1Q5U4P2 390 aa-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 DCAF12L2Q5VW00 463 aa-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 FOXB2Q5VYV0 432 aa-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 DPY19L3Q6ZPD9 716 aa-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 SLC16A12Q6ZSM3 486 aa-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 INTS8Q75QN2 995 aaKnown RBP-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 SLC9B2Q86UD5 537 aa-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 NFE4Q86UQ8 179 aa-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 PROSER2Q86WR7 435 aaPredicted RBP-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 PHYKPLQ8IUZ5 450 aa-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 MMAAQ8IVH4 418 aaKnown RBP-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 APLFQ8IW19 511 aaPredicted RBP-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 AHI1Q8N157 1196 aa-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 C19orf47Q8N9M1 422 aaKnown RBP-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 OR7D4Q8NG98 312 aa-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 GABPB2Q8TAK5 448 aaPredicted RBP-0.86□□□□□ -2.55
SNORA40.16-201ENST00000517238 POC1BQ8TC44 478 aa-0.86□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms