RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 TSPAN3O60637 253 aa15.22■□□□□ 0.03
SCARNA20.5-201ENST00000516991 HLA-FP30511 346 aa15.22■□□□□ 0.03
SCARNA20.5-201ENST00000516991 PPP1R2P41236 205 aa15.22■□□□□ 0.03
SCARNA20.5-201ENST00000516991 MATKP42679 507 aa15.22■□□□□ 0.03
SCARNA20.5-201ENST00000516991 DAOAP59103 153 aa15.22■□□□□ 0.03
SCARNA20.5-201ENST00000516991 ZBTB16Q05516 673 aa15.22■□□□□ 0.03
SCARNA20.5-201ENST00000516991 PKDCCQ504Y2 493 aa15.22■□□□□ 0.03
SCARNA20.5-201ENST00000516991 MPP7Q5T2T1 576 aa15.22■□□□□ 0.03
SCARNA20.5-201ENST00000516991 NUGGCQ68CJ6 796 aa15.22■□□□□ 0.03
SCARNA20.5-201ENST00000516991 LCLAT1Q6UWP7 414 aa15.22■□□□□ 0.03
SCARNA20.5-201ENST00000516991 CHST9Q7L1S5 443 aa15.22■□□□□ 0.03
SCARNA20.5-201ENST00000516991 CACUL1Q86Y37 369 aa15.22■□□□□ 0.03
SCARNA20.5-201ENST00000516991 UBR7Q8N806 425 aa15.22■□□□□ 0.03
SCARNA20.5-201ENST00000516991 ADAMTS14Q8WXS8 1223 aa15.22■□□□□ 0.03
SCARNA20.5-201ENST00000516991 NDRG1Q92597 394 aaKnown RBP15.22■□□□□ 0.03
SCARNA20.5-201ENST00000516991 EDEM1Q92611 657 aa15.22■□□□□ 0.03
SCARNA20.5-201ENST00000516991 GOLGA1Q92805 767 aa15.22■□□□□ 0.03
SCARNA20.5-201ENST00000516991 SMARCE1Q969G3 411 aa15.22■□□□□ 0.03
SCARNA20.5-201ENST00000516991 TMA16Q96EY4 203 aaKnown RBP15.22■□□□□ 0.03
SCARNA20.5-201ENST00000516991 NT5C1BQ96P26 610 aa15.22■□□□□ 0.03
SCARNA20.5-201ENST00000516991 TMEM245Q9H330 911 aa15.22■□□□□ 0.03
SCARNA20.5-201ENST00000516991 GDPD2Q9HCC8 539 aa15.22■□□□□ 0.03
SCARNA20.5-201ENST00000516991 ABCB8Q9NUT2 735 aa15.22■□□□□ 0.03
SCARNA20.5-201ENST00000516991 SFMBT1Q9UHJ3 866 aa15.22■□□□□ 0.03
SCARNA20.5-201ENST00000516991 GGA2Q9UJY4 613 aa15.22■□□□□ 0.03
SCARNA20.5-201ENST00000516991 APOBEC2Q9Y235 224 aaKnown RBP15.22■□□□□ 0.03
SCARNA20.5-201ENST00000516991 ZFHX4Q86UP3 3567 aa15.21■□□□□ 0.03
SCARNA20.5-201ENST00000516991 SRRM3A6NNA2 597 aaPredicted RBP15.21■□□□□ 0.03
SCARNA20.5-201ENST00000516991 PMM2O15305 246 aa15.21■□□□□ 0.03
SCARNA20.5-201ENST00000516991 ZZEF1O43149 2961 aa15.21■□□□□ 0.03
SCARNA20.5-201ENST00000516991 IRAK2O43187 625 aa15.21■□□□□ 0.03
SCARNA20.5-201ENST00000516991 IGLV3-27P01718 113 aa15.21■□□□□ 0.03
SCARNA20.5-201ENST00000516991 ATP5BP06576 529 aaKnown RBP15.21■□□□□ 0.03
SCARNA20.5-201ENST00000516991 PABPC1P11940 636 aaKnown RBP15.21■□□□□ 0.03
SCARNA20.5-201ENST00000516991 SLC11A2P49281 568 aa15.21■□□□□ 0.03
SCARNA20.5-201ENST00000516991 RING1Q06587 406 aa15.21■□□□□ 0.03
SCARNA20.5-201ENST00000516991 TTC31Q49AM3 519 aaPredicted RBP15.21■□□□□ 0.03
SCARNA20.5-201ENST00000516991 ANKRD40Q6AI12 368 aa15.21■□□□□ 0.03
SCARNA20.5-201ENST00000516991 KIAA0907Q7Z7F0 614 aaPredicted RBP15.21■□□□□ 0.03
SCARNA20.5-201ENST00000516991 GLRX5Q86SX6 157 aa15.21■□□□□ 0.03
SCARNA20.5-201ENST00000516991 UNC45BQ8IWX7 931 aa15.21■□□□□ 0.03
SCARNA20.5-201ENST00000516991 CHCHD4Q8N4Q1 142 aa15.21■□□□□ 0.03
SCARNA20.5-201ENST00000516991 SPATA20Q8TB22 786 aa15.21■□□□□ 0.03
SCARNA20.5-201ENST00000516991 UBA3Q8TBC4 463 aa15.21■□□□□ 0.03
SCARNA20.5-201ENST00000516991 CEP63Q96MT8 703 aa15.21■□□□□ 0.03
SCARNA20.5-201ENST00000516991 CAMK1GQ96NX5 476 aa15.21■□□□□ 0.03
SCARNA20.5-201ENST00000516991 EIF2B4Q9UI10 523 aaKnown RBP15.21■□□□□ 0.03
SCARNA20.5-201ENST00000516991 PCDHGB2Q9Y5G2 931 aa15.21■□□□□ 0.03
SCARNA20.5-201ENST00000516991 ZFYVE26Q68DK2 2539 aa15.2■□□□□ 0.02
SCARNA20.5-201ENST00000516991 CACNA1GO43497 2377 aa15.2■□□□□ 0.02
SCARNA20.5-201ENST00000516991 TYW5A2RUC4 315 aaKnown RBP15.2■□□□□ 0.02
SCARNA20.5-201ENST00000516991 MSI1O43347 362 aaKnown RBP15.2■□□□□ 0.02
SCARNA20.5-201ENST00000516991 FBXO21O94952 628 aa15.2■□□□□ 0.02
SCARNA20.5-201ENST00000516991 DLDP09622 509 aaKnown RBP15.2■□□□□ 0.02
SCARNA20.5-201ENST00000516991 FTH1P19P0C7X4 201 aa15.2■□□□□ 0.02
SCARNA20.5-201ENST00000516991 HLA-EP13747 358 aa15.2■□□□□ 0.02
SCARNA20.5-201ENST00000516991 LCP1P13796 627 aa15.2■□□□□ 0.02
SCARNA20.5-201ENST00000516991 FMO5P49326 533 aa15.2■□□□□ 0.02
SCARNA20.5-201ENST00000516991 AFF3P51826 1226 aaKnown RBP15.2■□□□□ 0.02
SCARNA20.5-201ENST00000516991 PMS1P54277 932 aaKnown RBP15.2■□□□□ 0.02
SCARNA20.5-201ENST00000516991 CETN1Q12798 172 aa15.2■□□□□ 0.02
SCARNA20.5-201ENST00000516991 LRMPQ12912 555 aa15.2■□□□□ 0.02
SCARNA20.5-201ENST00000516991 TEAD4Q15561 434 aa15.2■□□□□ 0.02
SCARNA20.5-201ENST00000516991 TMEM270Q6UE05 265 aa15.2■□□□□ 0.02
SCARNA20.5-201ENST00000516991 CYB5D2Q8WUJ1 264 aa15.2■□□□□ 0.02
SCARNA20.5-201ENST00000516991 SNX19Q92543 992 aa15.2■□□□□ 0.02
SCARNA20.5-201ENST00000516991 DDX50Q9BQ39 737 aaKnown RBP15.2■□□□□ 0.02
SCARNA20.5-201ENST00000516991 GAREM1Q9H706 876 aa15.2■□□□□ 0.02
SCARNA20.5-201ENST00000516991 OSGEPQ9NPF4 335 aa15.2■□□□□ 0.02
SCARNA20.5-201ENST00000516991 TM7SF3Q9NS93 570 aa15.2■□□□□ 0.02
SCARNA20.5-201ENST00000516991 PCOLCE2Q9UKZ9 415 aa15.2■□□□□ 0.02
SCARNA20.5-201ENST00000516991 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.2■□□□□ 0.02
SCARNA20.5-201ENST00000516991 NUMA1Q14980 2115 aa15.2■□□□□ 0.02
SCARNA20.5-201ENST00000516991 TRIM49BA6NDI0 452 aa15.19■□□□□ 0.02
SCARNA20.5-201ENST00000516991 M0QYV0 167 aa15.19■□□□□ 0.02
SCARNA20.5-201ENST00000516991 P4HA2O15460 535 aa15.19■□□□□ 0.02
SCARNA20.5-201ENST00000516991 FLRT2O43155 660 aa15.19■□□□□ 0.02
SCARNA20.5-201ENST00000516991 SART1O43290 800 aaKnown RBP15.19■□□□□ 0.02
SCARNA20.5-201ENST00000516991 CBFA2T3O75081 653 aa15.19■□□□□ 0.02
SCARNA20.5-201ENST00000516991 SEMA4FO95754 770 aa15.19■□□□□ 0.02
SCARNA20.5-201ENST00000516991 LTFP02788 710 aa15.19■□□□□ 0.02
SCARNA20.5-201ENST00000516991 DNTTP04053 509 aa15.19■□□□□ 0.02
SCARNA20.5-201ENST00000516991 POLR2EP19388 210 aaKnown RBP15.19■□□□□ 0.02
SCARNA20.5-201ENST00000516991 NNTQ13423 1086 aa15.19■□□□□ 0.02
SCARNA20.5-201ENST00000516991 CNGA2Q16280 664 aa15.19■□□□□ 0.02
SCARNA20.5-201ENST00000516991 PIK3R6Q5UE93 754 aa15.19■□□□□ 0.02
SCARNA20.5-201ENST00000516991 MBLAC2Q68D91 279 aa15.19■□□□□ 0.02
SCARNA20.5-201ENST00000516991 ZNF776Q68DI1 518 aaPredicted RBP15.19■□□□□ 0.02
SCARNA20.5-201ENST00000516991 ADIPOR2Q86V24 386 aa15.19■□□□□ 0.02
SCARNA20.5-201ENST00000516991 FAM124AQ86V42 546 aa15.19■□□□□ 0.02
SCARNA20.5-201ENST00000516991 PPM1KQ8N3J5 372 aa15.19■□□□□ 0.02
SCARNA20.5-201ENST00000516991 HJURPQ8NCD3 748 aaPredicted RBP15.19■□□□□ 0.02
SCARNA20.5-201ENST00000516991 C1orf216Q8TAB5 229 aa15.19■□□□□ 0.02
SCARNA20.5-201ENST00000516991 SLC35F5Q8WV83 523 aa15.19■□□□□ 0.02
SCARNA20.5-201ENST00000516991 AZIN2Q96A70 460 aa15.19■□□□□ 0.02
SCARNA20.5-201ENST00000516991 DHTKD1Q96HY7 919 aaPredicted RBP15.19■□□□□ 0.02
SCARNA20.5-201ENST00000516991 HSFY1Q96LI6 401 aa15.19■□□□□ 0.02
SCARNA20.5-201ENST00000516991 TIGD1Q96MW7 591 aa15.19■□□□□ 0.02
SCARNA20.5-201ENST00000516991 CDC6Q99741 560 aa15.19■□□□□ 0.02
SCARNA20.5-201ENST00000516991 BTBD1Q9H0C5 482 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms