RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 TLR5O60602 858 aa7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 LPXNO60711 386 aa7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 ZNF189O75820 626 aaPredicted RBP7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 MOCS2O96007 188 aaPredicted RBP7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 ETS1P14921 441 aa7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 HMGA1P17096 107 aaKnown RBP7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 IVDP26440 423 aa7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 STIP1P31948 543 aaKnown RBP7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 HTR7P34969 479 aa7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 ACTN2P35609 894 aa7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 PPP3CCP48454 512 aa7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 KPNA1P52294 538 aaPredicted RBP7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 UBE3AQ05086 875 aa7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 GPS1Q13098 491 aa7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 MTA1Q13330 715 aa7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 PAFAH1B3Q15102 231 aaKnown RBP7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 P3H1Q32P28 736 aa7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 SLC45A4Q5BKX6 768 aa7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 HECTD3Q5T447 861 aa7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 SNX30Q5VWJ9 437 aa7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 ZDHHC24Q6UX98 284 aa7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 CCDC149Q6ZUS6 474 aa7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 DNAJB7Q7Z6W7 309 aaPredicted RBP7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 MIB1Q86YT6 1006 aa7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 UNC45BQ8IWX7 931 aa7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 MREGQ8N565 214 aa7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 ATP6V0D2Q8N8Y2 350 aa7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 FBXO25Q8TCJ0 367 aa7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 ART4Q93070 314 aa7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 SLC39A13Q96H72 371 aa7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 FCRL2Q96LA5 508 aaPredicted RBP7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 KLHL5Q96PQ7 755 aa7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 FERMT1Q9BQL6 677 aa7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 C17orf80Q9BSJ5 609 aa7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 NACA2Q9H009 215 aa7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 SIK2Q9H0K1 926 aa7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 CCSER2Q9H7U1 834 aa7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 VIPAS39Q9H9C1 493 aa7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 ALG13Q9NP73 1137 aaKnown RBP7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 ETNK2Q9NVF9 386 aa7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 UXTQ9UBK9 157 aaPredicted RBP7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 SLC12A6Q9UHW9 1150 aa7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 DNMT3LQ9UJW3 386 aa7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 ANAPC5Q9UJX4 755 aa7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 HBS1LQ9Y450 684 aaKnown RBP7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 SNX10Q9Y5X0 201 aa7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 NR2E3Q9Y5X4 410 aa7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 IRAK3Q9Y616 596 aa7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 RAD54BQ9Y620 910 aa7.89□□□□□ -1.15
SCARNA20.1-201ENST00000516009 ZNF840PA6NDX5 716 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 HACD1B0YJ81 288 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 DNALI1O14645 258 aaPredicted RBP7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 PPP1R12AO14974 1030 aaPredicted RBP7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 DCLK1O15075 740 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 FGF10O15520 208 aaPredicted RBP7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 KCNN4O15554 427 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 MFSD11O43934 449 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 SASH3O75995 380 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 LRIG2O94898 1065 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 MAP3K6O95382 1288 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 TBX18O95935 607 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 IGLV3-27P01718 113 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 LRG1P02750 347 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 RB1P06400 928 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 HMBSP08397 361 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 SPATA31D3P0C874 917 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 ZSCAN5DPP0CG00 497 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 SRGAP2BP0DMP2 458 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 ERCC2P18074 760 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 RBL1P28749 1068 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 EPHB2P29323 1055 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 SERPINB6P35237 376 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 RPL22P35268 128 aaKnown RBP7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 ATP5C1P36542 298 aaKnown RBP7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 GGCXP38435 758 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 HSPA9P38646 679 aaKnown RBP7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 TUBP50607 506 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 ITGA8P53708 1063 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 GDF10P55107 478 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 ERVFC1P60507 584 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 NRG1Q02297 640 aaPredicted RBP7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 RING1Q06587 406 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 SLC10A2Q12908 348 aaPredicted RBP7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 PDK1Q15118 436 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 C9orf50Q5SZB4 431 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 ACBD5Q5T8D3 534 aaPredicted RBP7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 IZUMO3Q5VZ72 239 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 PLPP4Q5VZY2 271 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 RWDD4Q6NW29 188 aaKnown RBP7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 LILRA6Q6PI73 481 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 KLHDC10Q6PID8 442 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 CEP128Q6ZU80 1094 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 SPATA31D4Q6ZUB0 917 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 PCGF5Q86SE9 256 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 PRUNE1Q86TP1 453 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 MRPL43Q8N983 215 aaKnown RBP7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 FAM71DQ8N9W8 422 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 GLIS1Q8NBF1 620 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 SPPL3Q8TCT6 385 aa7.88□□□□□ -1.15
SCARNA20.1-201ENST00000516009 TFB1MQ8WVM0 346 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms