RNA–Protein interactions for RNA: ENST00000515881.5

DDR1-280, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 956 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-280ENST00000515881 ADAM32Q8TC27 787 aa20.32■□□□□ 0.84
DDR1-280ENST00000515881 SLC39A13Q96H72 371 aa20.32■□□□□ 0.84
DDR1-280ENST00000515881 DDX50Q9BQ39 737 aaKnown RBP20.32■□□□□ 0.84
DDR1-280ENST00000515881 TUBGCP2Q9BSJ2 902 aa20.32■□□□□ 0.84
DDR1-280ENST00000515881 MKRN2Q9H000 416 aaKnown RBP20.32■□□□□ 0.84
DDR1-280ENST00000515881 PRDM16Q9HAZ2 1276 aa20.32■□□□□ 0.84
DDR1-280ENST00000515881 POPDC2Q9HBU9 364 aa20.32■□□□□ 0.84
DDR1-280ENST00000515881 CD93Q9NPY3 652 aa20.32■□□□□ 0.84
DDR1-280ENST00000515881 LMBRD1Q9NUN5 540 aa20.32■□□□□ 0.84
DDR1-280ENST00000515881 TMEM74BQ9NUR3 256 aa20.32■□□□□ 0.84
DDR1-280ENST00000515881 TJP2Q9UDY2 1190 aa20.32■□□□□ 0.84
DDR1-280ENST00000515881 GGA2Q9UJY4 613 aa20.32■□□□□ 0.84
DDR1-280ENST00000515881 PILRBQ9UKJ0 227 aa20.32■□□□□ 0.84
DDR1-280ENST00000515881 PCDHGC3Q9UN70 934 aa20.32■□□□□ 0.84
DDR1-280ENST00000515881 ATXN2Q99700 1313 aaKnown RBP20.31■□□□□ 0.84
DDR1-280ENST00000515881 PABPC1P11940 636 aaKnown RBP20.31■□□□□ 0.84
DDR1-280ENST00000515881 ITPKAP23677 461 aa20.31■□□□□ 0.84
DDR1-280ENST00000515881 HOXD12P35452 270 aa20.31■□□□□ 0.84
DDR1-280ENST00000515881 IRX4P78413 519 aa20.31■□□□□ 0.84
DDR1-280ENST00000515881 PTK2Q05397 1052 aa20.31■□□□□ 0.84
DDR1-280ENST00000515881 TRIM61Q5EBN2 209 aa20.31■□□□□ 0.84
DDR1-280ENST00000515881 PEAR1Q5VY43 1037 aaPredicted RBP20.31■□□□□ 0.84
DDR1-280ENST00000515881 CHST9Q7L1S5 443 aa20.31■□□□□ 0.84
DDR1-280ENST00000515881 METTL3Q86U44 580 aaKnown RBP20.31■□□□□ 0.84
DDR1-280ENST00000515881 ADIPOR2Q86V24 386 aa20.31■□□□□ 0.84
DDR1-280ENST00000515881 PASD1Q8IV76 773 aa20.31■□□□□ 0.84
DDR1-280ENST00000515881 AHI1Q8N157 1196 aa20.31■□□□□ 0.84
DDR1-280ENST00000515881 WDTC1Q8N5D0 677 aa20.31■□□□□ 0.84
DDR1-280ENST00000515881 HJURPQ8NCD3 748 aaPredicted RBP20.31■□□□□ 0.84
DDR1-280ENST00000515881 WFDC5Q8TCV5 224 aa20.31■□□□□ 0.84
DDR1-280ENST00000515881 PRICKLE1Q96MT3 831 aaPredicted RBP20.31■□□□□ 0.84
DDR1-280ENST00000515881 NCOR2Q9Y618 2525 aa20.31■□□□□ 0.84
DDR1-280ENST00000515881 C4orf47A7E2U8 309 aa20.3■□□□□ 0.84
DDR1-280ENST00000515881 EPHX1P07099 455 aa20.3■□□□□ 0.84
DDR1-280ENST00000515881 ZNF33AQ06730 810 aa20.3■□□□□ 0.84
DDR1-280ENST00000515881 CT47A1Q5JQC4 288 aaPredicted RBP20.3■□□□□ 0.84
DDR1-280ENST00000515881 TMPRSS6Q8IU80 811 aa20.3■□□□□ 0.84
DDR1-280ENST00000515881 ZNF557Q8N988 423 aaPredicted RBP20.3■□□□□ 0.84
DDR1-280ENST00000515881 CYB5D2Q8WUJ1 264 aa20.3■□□□□ 0.84
DDR1-280ENST00000515881 PPP1R13BQ96KQ4 1090 aa20.3■□□□□ 0.84
DDR1-280ENST00000515881 CPXM1Q96SM3 734 aa20.3■□□□□ 0.84
DDR1-280ENST00000515881 LSM14BQ9BX40 385 aaKnown RBP20.3■□□□□ 0.84
DDR1-280ENST00000515881 LHX5Q9H2C1 402 aa20.3■□□□□ 0.84
DDR1-280ENST00000515881 TMEM9BQ9NQ34 198 aa20.3■□□□□ 0.84
DDR1-280ENST00000515881 USP36Q9P275 1121 aaKnown RBP20.3■□□□□ 0.84
DDR1-280ENST00000515881 PLA2G4CQ9UP65 541 aa20.3■□□□□ 0.84
DDR1-280ENST00000515881 RALGAPA1Q6GYQ0 2036 aa20.3■□□□□ 0.84
DDR1-280ENST00000515881 ABCA7Q8IZY2 2146 aa20.29■□□□□ 0.84
DDR1-280ENST00000515881 KCNJ18B7U540 433 aa20.29■□□□□ 0.84
DDR1-280ENST00000515881 FOXN3O00409 490 aaPredicted RBP20.29■□□□□ 0.84
DDR1-280ENST00000515881 NDUFS2O75306 463 aa20.29■□□□□ 0.84
DDR1-280ENST00000515881 TRUB2O95900 331 aaKnown RBP20.29■□□□□ 0.84
DDR1-280ENST00000515881 MOCS2O96007 188 aaPredicted RBP20.29■□□□□ 0.84
DDR1-280ENST00000515881 IGLV3-25P01717 112 aa20.29■□□□□ 0.84
DDR1-280ENST00000515881 APOEP02649 317 aa20.29■□□□□ 0.84
DDR1-280ENST00000515881 ADRB1P08588 477 aa20.29■□□□□ 0.84
DDR1-280ENST00000515881 PNMA6AP0CW24 399 aaPredicted RBP20.29■□□□□ 0.84
DDR1-280ENST00000515881 KCNA4P22459 653 aa20.29■□□□□ 0.84
DDR1-280ENST00000515881 CD70P32970 193 aa20.29■□□□□ 0.84
DDR1-280ENST00000515881 COPAP53621 1224 aa20.29■□□□□ 0.84
DDR1-280ENST00000515881 LMAN2Q12907 356 aa20.29■□□□□ 0.84
DDR1-280ENST00000515881 KCNJ12Q14500 433 aa20.29■□□□□ 0.84
DDR1-280ENST00000515881 TAF5Q15542 800 aa20.29■□□□□ 0.84
DDR1-280ENST00000515881 FNDC3BQ53EP0 1204 aaKnown RBP20.29■□□□□ 0.84
DDR1-280ENST00000515881 MS4A13Q5J8X5 152 aa20.29■□□□□ 0.84
DDR1-280ENST00000515881 MBLAC2Q68D91 279 aa20.29■□□□□ 0.84
DDR1-280ENST00000515881 DPY19L2P1Q6NXN4 242 aa20.29■□□□□ 0.84
DDR1-280ENST00000515881 SLC47A2Q86VL8 602 aa20.29■□□□□ 0.84
DDR1-280ENST00000515881 SLC41A1Q8IVJ1 513 aa20.29■□□□□ 0.84
DDR1-280ENST00000515881 MFN1Q8IWA4 741 aa20.29■□□□□ 0.84
DDR1-280ENST00000515881 FAM71AQ8IYT1 594 aa20.29■□□□□ 0.84
DDR1-280ENST00000515881 PRCCQ92733 491 aaPredicted RBP20.29■□□□□ 0.84
DDR1-280ENST00000515881 MYEOVQ96EZ4 313 aa20.29■□□□□ 0.84
DDR1-280ENST00000515881 HSPA12BQ96MM6 686 aa20.29■□□□□ 0.84
DDR1-280ENST00000515881 NOX5Q96PH1 765 aa20.29■□□□□ 0.84
DDR1-280ENST00000515881 NUSAP1Q9BXS6 441 aaKnown RBP20.29■□□□□ 0.84
DDR1-280ENST00000515881 NUCKS1Q9H1E3 243 aaKnown RBP20.29■□□□□ 0.84
DDR1-280ENST00000515881 TMEM245Q9H330 911 aa20.29■□□□□ 0.84
DDR1-280ENST00000515881 ITM2CQ9NQX7 267 aa20.29■□□□□ 0.84
DDR1-280ENST00000515881 SAMSN1Q9NSI8 373 aaKnown RBP20.29■□□□□ 0.84
DDR1-280ENST00000515881 STIM2Q9P246 746 aa20.29■□□□□ 0.84
DDR1-280ENST00000515881 PLXND1Q9Y4D7 1925 aa20.29■□□□□ 0.84
DDR1-280ENST00000515881 TYW5A2RUC4 315 aaKnown RBP20.28■□□□□ 0.84
DDR1-280ENST00000515881 CDX4O14627 284 aaPredicted RBP20.28■□□□□ 0.84
DDR1-280ENST00000515881 GLI1P08151 1106 aa20.28■□□□□ 0.84
DDR1-280ENST00000515881 DLDP09622 509 aaKnown RBP20.28■□□□□ 0.84
DDR1-280ENST00000515881 HLA-EP13747 358 aa20.28■□□□□ 0.84
DDR1-280ENST00000515881 CD6P30203 668 aa20.28■□□□□ 0.84
DDR1-280ENST00000515881 CLCN1P35523 988 aa20.28■□□□□ 0.84
DDR1-280ENST00000515881 KRT9P35527 623 aa20.28■□□□□ 0.84
DDR1-280ENST00000515881 RPS24P62847 133 aaKnown RBP20.28■□□□□ 0.84
DDR1-280ENST00000515881 PITX1P78337 314 aaPredicted RBP20.28■□□□□ 0.84
DDR1-280ENST00000515881 CAMK2GQ13555 558 aaPredicted RBP20.28■□□□□ 0.84
DDR1-280ENST00000515881 PTPRNQ16849 979 aa20.28■□□□□ 0.84
DDR1-280ENST00000515881 DCAF6Q58WW2 860 aa20.28■□□□□ 0.84
DDR1-280ENST00000515881 ZC3H12AQ5D1E8 599 aaKnown RBP20.28■□□□□ 0.84
DDR1-280ENST00000515881 SLC23A3Q6PIS1 610 aa20.28■□□□□ 0.84
DDR1-280ENST00000515881 C1orf131Q8NDD1 294 aaKnown RBP20.28■□□□□ 0.84
DDR1-280ENST00000515881 FIBINQ8TAL6 211 aa20.28■□□□□ 0.84
DDR1-280ENST00000515881 SIPA1Q96FS4 1042 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms