RNA–Protein interactions for RNA: ENST00000515494.5

CDK18-222, Transcript of cyclin dependent kinase 18, human

TSL 1 (best)

Gene CDK18, Length 3,756 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK18-222	ENST00000515494	TP53INP2	Q8IXH6	220 aa		10.88	□□□□□ -0.67
CDK18-222	ENST00000515494	AGAP11	Q8TF27	550 aa		10.88	□□□□□ -0.67
CDK18-222	ENST00000515494	CSPG4P5	Q96PW8	444 aa		10.88	□□□□□ -0.67
CDK18-222	ENST00000515494	CEP41	Q9BYV8	373 aa		10.88	□□□□□ -0.67
CDK18-222	ENST00000515494	EBF2	Q9HAK2	575 aa		10.88	□□□□□ -0.67
CDK18-222	ENST00000515494	PIDD1	Q9HB75	910 aa		10.88	□□□□□ -0.67
CDK18-222	ENST00000515494	PIGV	Q9NUD9	493 aa		10.88	□□□□□ -0.67
CDK18-222	ENST00000515494	TBC1D13	Q9NVG8	400 aa		10.88	□□□□□ -0.67
CDK18-222	ENST00000515494	SHOC2	Q9UQ13	582 aa		10.88	□□□□□ -0.67
CDK18-222	ENST00000515494	CAPN9	O14815	690 aa		10.88	□□□□□ -0.67
CDK18-222	ENST00000515494	CSPG5	O95196	566 aa		10.88	□□□□□ -0.67
CDK18-222	ENST00000515494	ZBED1	O96006	694 aa		10.88	□□□□□ -0.67
CDK18-222	ENST00000515494	BFSP2	Q13515	415 aa		10.88	□□□□□ -0.67
CDK18-222	ENST00000515494	CENPU	Q71F23	418 aa		10.88	□□□□□ -0.67
CDK18-222	ENST00000515494	LRRTM3	Q86VH5	581 aa		10.88	□□□□□ -0.67
CDK18-222	ENST00000515494	IGDCC3	Q8IVU1	814 aa		10.88	□□□□□ -0.67
CDK18-222	ENST00000515494	SLC7A14	Q8TBB6	771 aa		10.88	□□□□□ -0.67
CDK18-222	ENST00000515494	MYLPF	Q96A32	169 aa		10.88	□□□□□ -0.67
CDK18-222	ENST00000515494	PAWR	Q96IZ0	340 aa	Known RBP	10.88	□□□□□ -0.67
CDK18-222	ENST00000515494	SEC16B	Q96JE7	1060 aa		10.88	□□□□□ -0.67
CDK18-222	ENST00000515494	ANLN	Q9NQW6	1124 aa		10.88	□□□□□ -0.67
CDK18-222	ENST00000515494	LRFN2	Q9ULH4	789 aa		10.88	□□□□□ -0.67
CDK18-222	ENST00000515494	GMNC	A6NCL1	334 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	LUC7L3	O95232	432 aa	Known RBP	10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	LHX1	P48742	406 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	GPX6	P59796	221 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	XRCC4	Q13426	336 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	MPP2	Q14168	576 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	DPYSL2	Q16555	572 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	SLC25A52	Q3SY17	297 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	SDHAF4	Q5VUM1	108 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	SLC9A4	Q6AI14	798 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	CD300LG	Q6UXG3	332 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	SLC39A5	Q6ZMH5	540 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	TAX1BP1	Q86VP1	789 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	OR10T2	Q8NGX3	314 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	FAF2	Q96CS3	445 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	SERPINB12	Q96P63	405 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	PGLYRP2	Q96PD5	576 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	TSPAN18	Q96SJ8	248 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	PRMT1	Q99873	361 aa	Known RBP	10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	ROPN1B	Q9BZX4	212 aa	Predicted RBP	10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	ROPN1	Q9HAT0	212 aa	Predicted RBP	10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	CHMP2B	Q9UQN3	213 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	CLUH	O75153	1309 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494		I6L893	689 aa	Predicted RBP	10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	ZSCAN9	O15535	394 aa	Predicted RBP	10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	NCAM1	P13591	858 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	GCA	P28676	217 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	FAAP100	Q0VG06	881 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	TNFAIP8L3	Q5GJ75	292 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	GKAP1	Q5VSY0	366 aa	Predicted RBP	10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	MFSD5	Q6N075	450 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	KCNT2	Q6UVM3	1135 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	FBXO36	Q8NEA4	188 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	PYROXD1	Q8WU10	500 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	LGMN	Q99538	433 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	ZNF670	Q9BS34	389 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	INTS9	Q9NV88	658 aa	Known RBP	10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	OGDHL	Q9ULD0	1010 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	PCDHB7	Q9Y5E2	793 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	ZNF638	Q14966	1978 aa	Known RBP	10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	CEP290	O15078	2479 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	TMEM120B	A0PK00	339 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	DPPA5	A6NC42	116 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	FAM72C	H0Y354	149 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	ALOX15B	O15296	676 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	TRAPPC3	O43617	180 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	RPLP2	P05387	115 aa	Known RBP	10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	FAM133B	Q5BKY9	247 aa	Known RBP	10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	FAM72A	Q5TYM5	149 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	FAM72D	Q6L9T8	149 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	C6orf89	Q6UWU4	347 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	FAM72B	Q86X60	149 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	XPO6	Q96QU8	1125 aa	Known RBP	10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	TRIM56	Q9BRZ2	755 aa	Known RBP	10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	UBN1	Q9NPG3	1134 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	STK38L	Q9Y2H1	464 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	SNX10	Q9Y5X0	201 aa		10.87	□□□□□ -0.67
CDK18-222	ENST00000515494	APRT	P07741	180 aa		10.86	□□□□□ -0.67
CDK18-222	ENST00000515494	MNX1	P50219	401 aa	Predicted RBP	10.86	□□□□□ -0.67
CDK18-222	ENST00000515494	BLMH	Q13867	455 aa		10.86	□□□□□ -0.67
CDK18-222	ENST00000515494	OVOS1	Q6IE37	1185 aa		10.86	□□□□□ -0.67
CDK18-222	ENST00000515494	SCAMP5	Q8TAC9	235 aa		10.86	□□□□□ -0.67
CDK18-222	ENST00000515494	RSPH1	Q8WYR4	309 aa		10.86	□□□□□ -0.67
CDK18-222	ENST00000515494	YIPF2	Q9BWQ6	316 aa		10.86	□□□□□ -0.67
CDK18-222	ENST00000515494	DTL	Q9NZJ0	730 aa		10.86	□□□□□ -0.67
CDK18-222	ENST00000515494	TDRD15	B5MCY1	1934 aa	Known RBP	10.86	□□□□□ -0.67
CDK18-222	ENST00000515494	TBKBP1	A7MCY6	615 aa		10.86	□□□□□ -0.67
CDK18-222	ENST00000515494	SPAG7	O75391	227 aa		10.86	□□□□□ -0.67
CDK18-222	ENST00000515494	TADA2A	O75478	443 aa		10.86	□□□□□ -0.67
CDK18-222	ENST00000515494	STIP1	P31948	543 aa	Known RBP	10.86	□□□□□ -0.67
CDK18-222	ENST00000515494	ARL4C	P56559	192 aa		10.86	□□□□□ -0.67
CDK18-222	ENST00000515494	DAOA	P59103	153 aa		10.86	□□□□□ -0.67
CDK18-222	ENST00000515494	DEUP1	Q05D60	604 aa		10.86	□□□□□ -0.67
CDK18-222	ENST00000515494	VSTM1	Q6UX27	236 aa		10.86	□□□□□ -0.67
CDK18-222	ENST00000515494	C3orf62	Q6ZUJ4	267 aa		10.86	□□□□□ -0.67
CDK18-222	ENST00000515494	RELL1	Q8IUW5	271 aa		10.86	□□□□□ -0.67
CDK18-222	ENST00000515494	TMEM86A	Q8N2M4	240 aa		10.86	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms