RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 STAP1Q9ULZ2 295 aa13.27□□□□□ -0.29
CLCN3-210ENST00000515420 CFAP54Q96N23 3096 aa13.26□□□□□ -0.29
CLCN3-210ENST00000515420 RPP40O75818 363 aaKnown RBP13.26□□□□□ -0.29
CLCN3-210ENST00000515420 SLC6A4P31645 630 aa13.26□□□□□ -0.29
CLCN3-210ENST00000515420 CCR1P32246 355 aa13.26□□□□□ -0.29
CLCN3-210ENST00000515420 GSCP56915 257 aaPredicted RBP13.26□□□□□ -0.29
CLCN3-210ENST00000515420 FMO1Q01740 532 aa13.26□□□□□ -0.29
CLCN3-210ENST00000515420 ENPP2Q13822 863 aa13.26□□□□□ -0.29
CLCN3-210ENST00000515420 CKAP5Q14008 2032 aa13.26□□□□□ -0.29
CLCN3-210ENST00000515420 MS4A13Q5J8X5 152 aa13.26□□□□□ -0.29
CLCN3-210ENST00000515420 EGFLAMQ63HQ2 1017 aa13.26□□□□□ -0.29
CLCN3-210ENST00000515420 NADSYN1Q6IA69 706 aa13.26□□□□□ -0.29
CLCN3-210ENST00000515420 SDE2Q6IQ49 451 aa13.26□□□□□ -0.29
CLCN3-210ENST00000515420 TMEM92Q6UXU6 159 aa13.26□□□□□ -0.29
CLCN3-210ENST00000515420 CACNA2D4Q7Z3S7 1137 aa13.26□□□□□ -0.29
CLCN3-210ENST00000515420 KIAA0907Q7Z7F0 614 aaPredicted RBP13.26□□□□□ -0.29
CLCN3-210ENST00000515420 GPR161Q8N6U8 529 aaKnown RBP13.26□□□□□ -0.29
CLCN3-210ENST00000515420 ADAM32Q8TC27 787 aa13.26□□□□□ -0.29
CLCN3-210ENST00000515420 NT5C3BQ969T7 300 aa13.26□□□□□ -0.29
CLCN3-210ENST00000515420 PGAP3Q96FM1 320 aaPredicted RBP13.26□□□□□ -0.29
CLCN3-210ENST00000515420 LOXL4Q96JB6 756 aa13.26□□□□□ -0.29
CLCN3-210ENST00000515420 FAM204AQ9H8W3 233 aa13.26□□□□□ -0.29
CLCN3-210ENST00000515420 POLR3BQ9NW08 1133 aaPredicted RBP13.26□□□□□ -0.29
CLCN3-210ENST00000515420 DDIT4Q9NX09 232 aa13.26□□□□□ -0.29
CLCN3-210ENST00000515420 THAP10Q9P2Z0 257 aaPredicted RBP13.26□□□□□ -0.29
CLCN3-210ENST00000515420 NCDNQ9UBB6 729 aa13.26□□□□□ -0.29
CLCN3-210ENST00000515420 ZNF292O60281 2723 aa13.26□□□□□ -0.29
CLCN3-210ENST00000515420 ANTXRLA6NF34 631 aa13.25□□□□□ -0.29
CLCN3-210ENST00000515420 KCNU1A8MYU2 1149 aa13.25□□□□□ -0.29
CLCN3-210ENST00000515420 TEX33O43247 280 aa13.25□□□□□ -0.29
CLCN3-210ENST00000515420 TSPAN3O60637 253 aa13.25□□□□□ -0.29
CLCN3-210ENST00000515420 LRP3O75074 770 aa13.25□□□□□ -0.29
CLCN3-210ENST00000515420 GRAP2O75791 330 aa13.25□□□□□ -0.29
CLCN3-210ENST00000515420 HOXB2P14652 356 aa13.25□□□□□ -0.29
CLCN3-210ENST00000515420 FERP16591 822 aa13.25□□□□□ -0.29
CLCN3-210ENST00000515420 CHRNB2P17787 502 aa13.25□□□□□ -0.29
CLCN3-210ENST00000515420 ABCB4P21439 1286 aa13.25□□□□□ -0.29
CLCN3-210ENST00000515420 MMP8P22894 467 aa13.25□□□□□ -0.29
CLCN3-210ENST00000515420 HLA-FP30511 346 aa13.25□□□□□ -0.29
CLCN3-210ENST00000515420 PXNP49023 591 aaPredicted RBP13.25□□□□□ -0.29
CLCN3-210ENST00000515420 PITX1P78337 314 aaPredicted RBP13.25□□□□□ -0.29
CLCN3-210ENST00000515420 CENPCQ03188 943 aa13.25□□□□□ -0.29
CLCN3-210ENST00000515420 GEN1Q17RS7 908 aa13.25□□□□□ -0.29
CLCN3-210ENST00000515420 ZSCAN23Q3MJ62 389 aa13.25□□□□□ -0.29
CLCN3-210ENST00000515420 USP39Q53GS9 565 aaKnown RBP13.25□□□□□ -0.29
CLCN3-210ENST00000515420 ZC3H12AQ5D1E8 599 aaKnown RBP13.25□□□□□ -0.29
CLCN3-210ENST00000515420 ACBD5Q5T8D3 534 aaPredicted RBP13.25□□□□□ -0.29
CLCN3-210ENST00000515420 FAM102AQ5T9C2 384 aaPredicted RBP13.25□□□□□ -0.29
CLCN3-210ENST00000515420 TTC39BQ5VTQ0 682 aaPredicted RBP13.25□□□□□ -0.29
CLCN3-210ENST00000515420 NAA35Q5VZE5 725 aa13.25□□□□□ -0.29
CLCN3-210ENST00000515420 ANO7Q6IWH7 933 aa13.25□□□□□ -0.29
CLCN3-210ENST00000515420 RFWD3Q6PCD5 774 aa13.25□□□□□ -0.29
CLCN3-210ENST00000515420 PRR23BQ6ZRT6 265 aa13.25□□□□□ -0.29
CLCN3-210ENST00000515420 CEP68Q76N32 757 aa13.25□□□□□ -0.29
CLCN3-210ENST00000515420 CHPFQ8IZ52 775 aa13.25□□□□□ -0.29
CLCN3-210ENST00000515420 AHI1Q8N157 1196 aa13.25□□□□□ -0.29
CLCN3-210ENST00000515420 MDGA1Q8NFP4 955 aa13.25□□□□□ -0.29
CLCN3-210ENST00000515420 OLIG1Q8TAK6 271 aa13.25□□□□□ -0.29
CLCN3-210ENST00000515420 SLC20A1Q8WUM9 679 aa13.25□□□□□ -0.29
CLCN3-210ENST00000515420 ZC3H10Q96K80 434 aaKnown RBP13.25□□□□□ -0.29
CLCN3-210ENST00000515420 PRICKLE1Q96MT3 831 aaPredicted RBP13.25□□□□□ -0.29
CLCN3-210ENST00000515420 NPY6RQ99463 290 aa13.25□□□□□ -0.29
CLCN3-210ENST00000515420 CBX8Q9HC52 389 aa13.25□□□□□ -0.29
CLCN3-210ENST00000515420 ELOVL2Q9NXB9 296 aa13.25□□□□□ -0.29
CLCN3-210ENST00000515420 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.25□□□□□ -0.29
CLCN3-210ENST00000515420 CLEC4EQ9ULY5 219 aa13.25□□□□□ -0.29
CLCN3-210ENST00000515420 PAXBP1Q9Y5B6 917 aa13.25□□□□□ -0.29
CLCN3-210ENST00000515420 MUC22E2RYF6 1773 aaPredicted RBP13.25□□□□□ -0.29
CLCN3-210ENST00000515420 RALGAPA1Q6GYQ0 2036 aa13.24□□□□□ -0.29
CLCN3-210ENST00000515420 TBL1XO60907 577 aa13.24□□□□□ -0.29
CLCN3-210ENST00000515420 MOCS2O96007 188 aaPredicted RBP13.24□□□□□ -0.29
CLCN3-210ENST00000515420 F9P00740 461 aa13.24□□□□□ -0.29
CLCN3-210ENST00000515420 RETP07949 1114 aa13.24□□□□□ -0.29
CLCN3-210ENST00000515420 PABPC1P11940 636 aaKnown RBP13.24□□□□□ -0.29
CLCN3-210ENST00000515420 UNGP13051 313 aaPredicted RBP13.24□□□□□ -0.29
CLCN3-210ENST00000515420 HOXC13P31276 330 aa13.24□□□□□ -0.29
CLCN3-210ENST00000515420 SGSHP51688 502 aa13.24□□□□□ -0.29
CLCN3-210ENST00000515420 BYSLQ13895 437 aaKnown RBP13.24□□□□□ -0.29
CLCN3-210ENST00000515420 SLC25A52Q3SY17 297 aa13.24□□□□□ -0.29
CLCN3-210ENST00000515420 FIGNQ5HY92 759 aa13.24□□□□□ -0.29
CLCN3-210ENST00000515420 BRMS1LQ5PSV4 323 aa13.24□□□□□ -0.29
CLCN3-210ENST00000515420 PPP1R2P3Q6NXS1 205 aa13.24□□□□□ -0.29
CLCN3-210ENST00000515420 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.24□□□□□ -0.29
CLCN3-210ENST00000515420 MFN1Q8IWA4 741 aa13.24□□□□□ -0.29
CLCN3-210ENST00000515420 CCDC117Q8IWD4 279 aaPredicted RBP13.24□□□□□ -0.29
CLCN3-210ENST00000515420 FIBINQ8TAL6 211 aa13.24□□□□□ -0.29
CLCN3-210ENST00000515420 CPA5Q8WXQ8 436 aa13.24□□□□□ -0.29
CLCN3-210ENST00000515420 BAP1Q92560 729 aa13.24□□□□□ -0.29
CLCN3-210ENST00000515420 PRMT1Q99873 361 aaKnown RBP13.24□□□□□ -0.29
CLCN3-210ENST00000515420 HINFPQ9BQA5 517 aa13.24□□□□□ -0.29
CLCN3-210ENST00000515420 EDEM3Q9BZQ6 932 aa13.24□□□□□ -0.29
CLCN3-210ENST00000515420 NUCKS1Q9H1E3 243 aaKnown RBP13.24□□□□□ -0.29
CLCN3-210ENST00000515420 CD248Q9HCU0 757 aa13.24□□□□□ -0.29
CLCN3-210ENST00000515420 GGA2Q9UJY4 613 aa13.24□□□□□ -0.29
CLCN3-210ENST00000515420 TMEM59LQ9UK28 342 aa13.24□□□□□ -0.29
CLCN3-210ENST00000515420 WDR87Q6ZQQ6 2873 aa13.24□□□□□ -0.29
CLCN3-210ENST00000515420 GOLGA6L7A0A1B0GV03 622 aa13.23□□□□□ -0.29
CLCN3-210ENST00000515420 A0A1W2PQF6 199 aa13.23□□□□□ -0.29
CLCN3-210ENST00000515420 TCRBV21S2A2A0A5A6 115 aa13.23□□□□□ -0.29
CLCN3-210ENST00000515420 F5H5T6 163 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms