RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 MSNP26038 577 aaKnown RBP21.73■■□□□ 1.07
LSM6-207ENST00000515311 NRG1Q02297 640 aaPredicted RBP21.73■■□□□ 1.07
LSM6-207ENST00000515311 FAM133BQ5BKY9 247 aaKnown RBP21.73■■□□□ 1.07
LSM6-207ENST00000515311 BBS7Q8IWZ6 715 aa21.73■■□□□ 1.07
LSM6-207ENST00000515311 CPXM2Q8N436 756 aa21.73■■□□□ 1.07
LSM6-207ENST00000515311 OSCP1Q8WVF1 389 aa21.73■■□□□ 1.07
LSM6-207ENST00000515311 OSBPL2Q9H1P3 480 aa21.73■■□□□ 1.07
LSM6-207ENST00000515311 ZWILCHQ9H900 591 aa21.73■■□□□ 1.07
LSM6-207ENST00000515311 TMPRSS4Q9NRS4 437 aa21.73■■□□□ 1.07
LSM6-207ENST00000515311 XPO7Q9UIA9 1087 aaKnown RBP21.73■■□□□ 1.07
LSM6-207ENST00000515311 AMFRQ9UKV5 643 aa21.73■■□□□ 1.07
LSM6-207ENST00000515311 MIF4GDA9UHW6 222 aaKnown RBP21.72■■□□□ 1.07
LSM6-207ENST00000515311 RARAP10276 462 aa21.72■■□□□ 1.07
LSM6-207ENST00000515311 CTNNA1P35221 906 aaKnown RBP21.72■■□□□ 1.07
LSM6-207ENST00000515311 CHKAP35790 457 aa21.72■■□□□ 1.07
LSM6-207ENST00000515311 MLLT6P55198 1093 aaPredicted RBP21.72■■□□□ 1.07
LSM6-207ENST00000515311 ZP2Q05996 745 aa21.72■■□□□ 1.07
LSM6-207ENST00000515311 MS4A13Q5J8X5 152 aa21.72■■□□□ 1.07
LSM6-207ENST00000515311 PIK3R6Q5UE93 754 aa21.72■■□□□ 1.07
LSM6-207ENST00000515311 TXNRD3NBQ6F5E7 133 aa21.72■■□□□ 1.07
LSM6-207ENST00000515311 NADSYN1Q6IA69 706 aa21.72■■□□□ 1.07
LSM6-207ENST00000515311 C17orf53Q8N3J3 647 aaPredicted RBP21.72■■□□□ 1.07
LSM6-207ENST00000515311 PRMT1Q99873 361 aaKnown RBP21.72■■□□□ 1.07
LSM6-207ENST00000515311 PLA2G2FQ9BZM2 168 aa21.72■■□□□ 1.07
LSM6-207ENST00000515311 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.72■■□□□ 1.07
LSM6-207ENST00000515311 HS3ST4Q9Y661 456 aa21.72■■□□□ 1.07
LSM6-207ENST00000515311 CCDC66A2RUB6 948 aa21.71■■□□□ 1.07
LSM6-207ENST00000515311 SCAMP3O14828 347 aaKnown RBP21.71■■□□□ 1.07
LSM6-207ENST00000515311 FTCDO95954 541 aa21.71■■□□□ 1.07
LSM6-207ENST00000515311 CTNNA2P26232 953 aa21.71■■□□□ 1.07
LSM6-207ENST00000515311 L1CAMP32004 1257 aa21.71■■□□□ 1.07
LSM6-207ENST00000515311 ZNF135P52742 658 aaPredicted RBP21.71■■□□□ 1.07
LSM6-207ENST00000515311 PDGFRLQ15198 375 aa21.71■■□□□ 1.07
LSM6-207ENST00000515311 DPYSL2Q16555 572 aa21.71■■□□□ 1.07
LSM6-207ENST00000515311 SMTNL2Q2TAL5 461 aa21.71■■□□□ 1.07
LSM6-207ENST00000515311 KCNT1Q5JUK3 1230 aa21.71■■□□□ 1.07
LSM6-207ENST00000515311 YAF2Q8IY57 180 aa21.71■■□□□ 1.07
LSM6-207ENST00000515311 ASB2Q96Q27 587 aa21.71■■□□□ 1.07
LSM6-207ENST00000515311 KCNK12Q9HB15 430 aa21.71■■□□□ 1.07
LSM6-207ENST00000515311 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.71■■□□□ 1.07
LSM6-207ENST00000515311 DUS2Q9NX74 493 aaKnown RBP21.71■■□□□ 1.07
LSM6-207ENST00000515311 DDX56Q9NY93 547 aaKnown RBP21.71■■□□□ 1.07
LSM6-207ENST00000515311 OR12D3Q9UGF7 316 aa21.71■■□□□ 1.07
LSM6-207ENST00000515311 LIMD1Q9UGP4 676 aa21.71■■□□□ 1.07
LSM6-207ENST00000515311 PCDHA3Q9Y5H8 950 aa21.71■■□□□ 1.07
LSM6-207ENST00000515311 WNT6Q9Y6F9 365 aa21.71■■□□□ 1.07
LSM6-207ENST00000515311 GFRA2O00451 464 aa21.7■■□□□ 1.06
LSM6-207ENST00000515311 TACR2P21452 398 aa21.7■■□□□ 1.06
LSM6-207ENST00000515311 HTR7P34969 479 aa21.7■■□□□ 1.06
LSM6-207ENST00000515311 IFNAR2P48551 515 aa21.7■■□□□ 1.06
LSM6-207ENST00000515311 SEMA3BQ13214 749 aa21.7■■□□□ 1.06
LSM6-207ENST00000515311 AUHQ13825 339 aaKnown RBP21.7■■□□□ 1.06
LSM6-207ENST00000515311 ZNF569Q5MCW4 686 aa21.7■■□□□ 1.06
LSM6-207ENST00000515311 MEI1Q5TIA1 1274 aa21.7■■□□□ 1.06
LSM6-207ENST00000515311 RAP1GAP2Q684P5 730 aa21.7■■□□□ 1.06
LSM6-207ENST00000515311 ZSCAN30Q86W11 494 aa21.7■■□□□ 1.06
LSM6-207ENST00000515311 CHSY1Q86X52 802 aa21.7■■□□□ 1.06
LSM6-207ENST00000515311 FAM71BQ8TC56 605 aa21.7■■□□□ 1.06
LSM6-207ENST00000515311 HSPH1Q92598 858 aa21.7■■□□□ 1.06
LSM6-207ENST00000515311 HES6Q96HZ4 224 aa21.7■■□□□ 1.06
LSM6-207ENST00000515311 FAM83CQ9BQN1 747 aa21.7■■□□□ 1.06
LSM6-207ENST00000515311 RPP25Q9BUL9 199 aaKnown RBP21.7■■□□□ 1.06
LSM6-207ENST00000515311 TRMT61BQ9BVS5 477 aaKnown RBP21.7■■□□□ 1.06
LSM6-207ENST00000515311 SIK2Q9H0K1 926 aa21.7■■□□□ 1.06
LSM6-207ENST00000515311 DHX35Q9H5Z1 703 aaKnown RBP21.7■■□□□ 1.06
LSM6-207ENST00000515311 GPATCH2LQ9NWQ4 482 aa21.7■■□□□ 1.06
LSM6-207ENST00000515311 DOCK4Q8N1I0 1966 aa21.69■■□□□ 1.06
LSM6-207ENST00000515311 F5H5T6 163 aa21.69■■□□□ 1.06
LSM6-207ENST00000515311 CHADO15335 359 aa21.69■■□□□ 1.06
LSM6-207ENST00000515311 BMP1P13497 986 aa21.69■■□□□ 1.06
LSM6-207ENST00000515311 SLC6A4P31645 630 aa21.69■■□□□ 1.06
LSM6-207ENST00000515311 GJC1P36383 396 aa21.69■■□□□ 1.06
LSM6-207ENST00000515311 GRM2Q14416 872 aa21.69■■□□□ 1.06
LSM6-207ENST00000515311 CA9Q16790 459 aa21.69■■□□□ 1.06
LSM6-207ENST00000515311 EML3Q32P44 896 aa21.69■■□□□ 1.06
LSM6-207ENST00000515311 MANEALQ5VSG8 457 aa21.69■■□□□ 1.06
LSM6-207ENST00000515311 KATNAL2Q8IYT4 538 aa21.69■■□□□ 1.06
LSM6-207ENST00000515311 UBL4BQ8N7F7 174 aa21.69■■□□□ 1.06
LSM6-207ENST00000515311 ST13P5Q8NFI4 369 aaPredicted RBP21.69■■□□□ 1.06
LSM6-207ENST00000515311 ATP2A3Q93084 1043 aa21.69■■□□□ 1.06
LSM6-207ENST00000515311 ASIC4Q96FT7 647 aa21.69■■□□□ 1.06
LSM6-207ENST00000515311 EPAS1Q99814 870 aa21.69■■□□□ 1.06
LSM6-207ENST00000515311 JRKLQ9Y4A0 524 aa21.69■■□□□ 1.06
LSM6-207ENST00000515311 UNC80Q8N2C7 3258 aa21.69■■□□□ 1.06
LSM6-207ENST00000515311 IGLV3-10A0A075B6K4 115 aa21.68■■□□□ 1.06
LSM6-207ENST00000515311 GOLGA6L7A0A1B0GV03 622 aa21.68■■□□□ 1.06
LSM6-207ENST00000515311 C19orf67A6NJJ6 358 aa21.68■■□□□ 1.06
LSM6-207ENST00000515311 TNNT1P13805 278 aa21.68■■□□□ 1.06
LSM6-207ENST00000515311 MARCKSL1P49006 195 aa21.68■■□□□ 1.06
LSM6-207ENST00000515311 PEX5P50542 639 aa21.68■■□□□ 1.06
LSM6-207ENST00000515311 ARSEP51690 589 aa21.68■■□□□ 1.06
LSM6-207ENST00000515311 PDK2Q15119 407 aa21.68■■□□□ 1.06
LSM6-207ENST00000515311 C5orf22Q49AR2 442 aa21.68■■□□□ 1.06
LSM6-207ENST00000515311 ATP13A4Q4VNC1 1196 aa21.68■■□□□ 1.06
LSM6-207ENST00000515311 TTC39BQ5VTQ0 682 aaPredicted RBP21.68■■□□□ 1.06
LSM6-207ENST00000515311 LRRC31Q6UY01 552 aa21.68■■□□□ 1.06
LSM6-207ENST00000515311 VSIG1Q86XK7 387 aa21.68■■□□□ 1.06
LSM6-207ENST00000515311 ZNF683Q8IZ20 524 aa21.68■■□□□ 1.06
LSM6-207ENST00000515311 ADGRG2Q8IZP9 1017 aa21.68■■□□□ 1.06
LSM6-207ENST00000515311 PYROXD2Q8N2H3 581 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms