RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 SLC23A3Q6PIS1 610 aa10.87□□□□□ -0.67
HMGXB3-205ENST00000514469 ADIPOR2Q86V24 386 aa10.87□□□□□ -0.67
HMGXB3-205ENST00000514469 CREBRFQ8IUR6 639 aa10.87□□□□□ -0.67
HMGXB3-205ENST00000514469 SLC41A1Q8IVJ1 513 aa10.87□□□□□ -0.67
HMGXB3-205ENST00000514469 FAM114A1Q8IWE2 563 aa10.87□□□□□ -0.67
HMGXB3-205ENST00000514469 AHI1Q8N157 1196 aa10.87□□□□□ -0.67
HMGXB3-205ENST00000514469 SORCS1Q8WY21 1168 aa10.87□□□□□ -0.67
HMGXB3-205ENST00000514469 LSM14BQ9BX40 385 aaKnown RBP10.87□□□□□ -0.67
HMGXB3-205ENST00000514469 POPDC2Q9HBU9 364 aa10.87□□□□□ -0.67
HMGXB3-205ENST00000514469 TMEM9BQ9NQ34 198 aa10.87□□□□□ -0.67
HMGXB3-205ENST00000514469 ABCB8Q9NUT2 735 aa10.87□□□□□ -0.67
HMGXB3-205ENST00000514469 TJP2Q9UDY2 1190 aa10.87□□□□□ -0.67
HMGXB3-205ENST00000514469 DACH1Q9UI36 760 aa10.87□□□□□ -0.67
HMGXB3-205ENST00000514469 GGA2Q9UJY4 613 aa10.87□□□□□ -0.67
HMGXB3-205ENST00000514469 PCDHGC3Q9UN70 934 aa10.87□□□□□ -0.67
HMGXB3-205ENST00000514469 C4orf47A7E2U8 309 aa10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 CDX4O14627 284 aaPredicted RBP10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 SYNCRIPO60506 623 aaKnown RBP10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 TBL1XO60907 577 aa10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 IGLV3-19P01714 112 aa10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 C7P10643 843 aa10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 PABPC1P11940 636 aaKnown RBP10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 ANP32AP39687 249 aaKnown RBP10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 USP8P40818 1118 aa10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 YWHAZP63104 245 aaKnown RBP10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 IRX4P78413 519 aa10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 ARID5AQ03989 594 aa10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 ZNF33AQ06730 810 aa10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 LMAN2Q12907 356 aa10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 EIF4EBP2Q13542 120 aaPredicted RBP10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 PTPRNQ16849 979 aa10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 VWA3BQ502W6 1294 aa10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 SYPL2Q5VXT5 272 aa10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 DPY19L2P1Q6NXN4 242 aa10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 KIAA1324Q6UXG2 1013 aaKnown RBP10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 SERPINA13PQ6UXR4 307 aa10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 CHST9Q7L1S5 443 aa10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 WDTC1Q8N5D0 677 aa10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 ZNF557Q8N988 423 aaPredicted RBP10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 HJURPQ8NCD3 748 aaPredicted RBP10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 ADAM32Q8TC27 787 aa10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 MYEOVQ96EZ4 313 aa10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 LMLNQ96KR4 655 aa10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 HSPA12BQ96MM6 686 aa10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 CPXM1Q96SM3 734 aa10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 TUBGCP2Q9BSJ2 902 aa10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 NUSAP1Q9BXS6 441 aaKnown RBP10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 NUCKS1Q9H1E3 243 aaKnown RBP10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 LHX5Q9H2C1 402 aa10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 TMEM245Q9H330 911 aa10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 NDST4Q9H3R1 872 aa10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 PRDM16Q9HAZ2 1276 aa10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 LMBRD1Q9NUN5 540 aa10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 ASNSD1Q9NWL6 643 aa10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 DNAJC12Q9UKB3 198 aa10.86□□□□□ -0.67
HMGXB3-205ENST00000514469 TYW5A2RUC4 315 aaKnown RBP10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 KCNJ18B7U540 433 aa10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 CAPN9O14815 690 aa10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 KCNK5O95279 499 aa10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 TRUB2O95900 331 aaKnown RBP10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 EPHX1P07099 455 aa10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 GLI1P08151 1106 aa10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 DLDP09622 509 aaKnown RBP10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 PNMA6AP0CW24 399 aaPredicted RBP10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 HLA-EP13747 358 aa10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 PRKCSHP14314 528 aaPredicted RBP10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 ENGP17813 658 aa10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 CD6P30203 668 aa10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 CD70P32970 193 aa10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 CLCN1P35523 988 aa10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 TPMTP51580 245 aa10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 PITX1P78337 314 aaPredicted RBP10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 CAMK2GQ13555 558 aaPredicted RBP10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 FNDC3BQ53EP0 1204 aaKnown RBP10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 MS4A13Q5J8X5 152 aa10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 CT47A1Q5JQC4 288 aaPredicted RBP10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 MBLAC2Q68D91 279 aa10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 RABEPKQ7Z6M1 372 aa10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 TMPRSS6Q8IU80 811 aa10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 PASD1Q8IV76 773 aa10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 MFN1Q8IWA4 741 aa10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 DEFB119Q8N690 84 aa10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 C1orf131Q8NDD1 294 aaKnown RBP10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 FIBINQ8TAL6 211 aa10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 CEP76Q8TAP6 659 aa10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 CYB5D2Q8WUJ1 264 aa10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 SIPA1Q96FS4 1042 aa10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 ZNF419Q96HQ0 510 aaPredicted RBP10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 SLC2A13Q96QE2 648 aa10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 DDX50Q9BQ39 737 aaKnown RBP10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 CAPN10Q9HC96 672 aa10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 ITM2CQ9NQX7 267 aa10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 WSB2Q9NYS7 404 aaPredicted RBP10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 XPO7Q9UIA9 1087 aaKnown RBP10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 RALGAPA1Q6GYQ0 2036 aa10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 PCDH15Q96QU1 1955 aa10.85□□□□□ -0.67
HMGXB3-205ENST00000514469 CKAP5Q14008 2032 aa10.84□□□□□ -0.67
HMGXB3-205ENST00000514469 NUP205Q92621 2012 aa10.84□□□□□ -0.67
HMGXB3-205ENST00000514469 FOXN3O00409 490 aaPredicted RBP10.84□□□□□ -0.67
HMGXB3-205ENST00000514469 HSF2BPO75031 334 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms