RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 SCNN1AP37088 669 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 RPS9P46781 194 aaKnown RBP8.65□□□□□ -1.02
CCL28-204ENST00000514421 VCPP55072 806 aaKnown RBP8.65□□□□□ -1.02
CCL28-204ENST00000514421 TBX4P57082 545 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 NOMO3P69849 1222 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 GRSF1Q12849 480 aaKnown RBP eCLIP8.65□□□□□ -1.02
CCL28-204ENST00000514421 PON2Q15165 354 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 TAF5Q15542 800 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 DCAF6Q58WW2 860 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 LY6G5CQ5SRR4 150 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 SYPL2Q5VXT5 272 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 NAA35Q5VZE5 725 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 WDR93Q6P2C0 686 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 FBXO38Q6PIJ6 1188 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 TXNDC11Q6PKC3 985 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 Q6ZNB5 142 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 FAM183BPQ6ZVS7 135 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 SLC26A9Q7LBE3 791 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 CTAGE6Q86UF2 777 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 TMEM25Q86YD3 366 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 DENND1CQ8IV53 801 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 UNC45BQ8IWX7 931 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 CTAGE4Q8IX94 777 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 DEFB106AQ8N104 65 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 SYNPOQ8N3V7 929 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 PJA1Q8NG27 643 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 TPCN2Q8NHX9 752 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 DQX1Q8TE96 717 aaKnown RBP8.65□□□□□ -1.02
CCL28-204ENST00000514421 HNRNPLLQ8WVV9 542 aaKnown RBP8.65□□□□□ -1.02
CCL28-204ENST00000514421 RFFLQ8WZ73 363 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 RUBCNQ92622 972 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 CD101Q93033 1021 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 SERPINB11Q96P15 392 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 SLC2A13Q96QE2 648 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 OSBPL9Q96SU4 736 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 P2RY13Q9BPV8 354 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.65□□□□□ -1.02
CCL28-204ENST00000514421 KCNH6Q9H252 994 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 SPHK2Q9NRA0 654 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 TMEM51Q9NW97 253 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 FAM53CQ9NYF3 392 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 RRN3Q9NYV6 651 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 DLGAP2Q9P1A6 1054 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 TJP2Q9UDY2 1190 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 AGO1Q9UL18 857 aaKnown RBP8.65□□□□□ -1.02
CCL28-204ENST00000514421 HYOU1Q9Y4L1 999 aa8.65□□□□□ -1.02
CCL28-204ENST00000514421 ANAPC1Q9H1A4 1944 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 A0A0A0MRY4 1105 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 TARSL2A2RTX5 802 aaKnown RBP8.64□□□□□ -1.03
CCL28-204ENST00000514421 CCDC151A5D8V7 595 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 ATP8B1O43520 1251 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 RTN2O75298 545 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 PALMO75781 387 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 GRAP2O75791 330 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 LATS1O95835 1130 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 TRUB2O95900 331 aaKnown RBP8.64□□□□□ -1.03
CCL28-204ENST00000514421 CYP17A1P05093 508 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 CHRNB1P11230 501 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 ADH5P11766 374 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 MMP8P22894 467 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 NSFP46459 744 aaKnown RBP8.64□□□□□ -1.03
CCL28-204ENST00000514421 SLC6A11P48066 632 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 GALCP54803 685 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 RNASE9P60153 205 aaKnown RBP8.64□□□□□ -1.03
CCL28-204ENST00000514421 RING1Q06587 406 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 NNTQ13423 1086 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 LRRC32Q14392 662 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 CLEC16AQ2KHT3 1053 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 ANO4Q32M45 955 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 FBXO43Q4G163 708 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 PREPLQ4J6C6 727 aaPredicted RBP8.64□□□□□ -1.03
CCL28-204ENST00000514421 TMEM196Q5HYL7 178 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 NUGGCQ68CJ6 796 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 ACAD10Q6JQN1 1059 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 PPP1R2P3Q6NXS1 205 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 OLFML1Q6UWY5 402 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 ARCQ7LC44 396 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 XYLT1Q86Y38 959 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 PHF13Q86YI8 300 aaPredicted RBP8.64□□□□□ -1.03
CCL28-204ENST00000514421 RHOT2Q8IXI1 618 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 CCDC105Q8IYK2 499 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 MMGT1Q8N4V1 131 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 DTWD2Q8NBA8 298 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 CCDC26Q8TAB7 109 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 CHFRQ96EP1 664 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 SLC39A13Q96H72 371 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 XPO6Q96QU8 1125 aaKnown RBP8.64□□□□□ -1.03
CCL28-204ENST00000514421 PNKPQ96T60 521 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 DDX50Q9BQ39 737 aaKnown RBP8.64□□□□□ -1.03
CCL28-204ENST00000514421 ANKZF1Q9H8Y5 726 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 FBRSL1Q9HCM7 1045 aaKnown RBP8.64□□□□□ -1.03
CCL28-204ENST00000514421 SEPT11Q9NVA2 429 aaKnown RBP8.64□□□□□ -1.03
CCL28-204ENST00000514421 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.64□□□□□ -1.03
CCL28-204ENST00000514421 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.64□□□□□ -1.03
CCL28-204ENST00000514421 ADAM22Q9P0K1 906 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 MARK1Q9P0L2 795 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 SLC12A6Q9UHW9 1150 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 STOML2Q9UJZ1 356 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 TLR6Q9Y2C9 796 aa8.64□□□□□ -1.03
CCL28-204ENST00000514421 DENND4CQ5VZ89 1909 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms