RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 FUT11Q495W5 492 aa12.51□□□□□ -0.41
CDK7-208ENST00000512687 MPPE1Q53F39 396 aa12.51□□□□□ -0.41
CDK7-208ENST00000512687 ADGRF1Q5T601 910 aa12.51□□□□□ -0.41
CDK7-208ENST00000512687 STPG1Q5TH74 334 aa12.51□□□□□ -0.41
CDK7-208ENST00000512687 SYPL2Q5VXT5 272 aa12.51□□□□□ -0.41
CDK7-208ENST00000512687 LPCAT2Q7L5N7 544 aa12.51□□□□□ -0.41
CDK7-208ENST00000512687 PASD1Q8IV76 773 aa12.51□□□□□ -0.41
CDK7-208ENST00000512687 WDTC1Q8N5D0 677 aa12.51□□□□□ -0.41
CDK7-208ENST00000512687 DEFB119Q8N690 84 aa12.51□□□□□ -0.41
CDK7-208ENST00000512687 ADAM32Q8TC27 787 aa12.51□□□□□ -0.41
CDK7-208ENST00000512687 FAM149B1Q96BN6 582 aa12.51□□□□□ -0.41
CDK7-208ENST00000512687 MRGPRX1Q96LB2 322 aa12.51□□□□□ -0.41
CDK7-208ENST00000512687 EDEM2Q9BV94 578 aa12.51□□□□□ -0.41
CDK7-208ENST00000512687 SLC2A11Q9BYW1 496 aa12.51□□□□□ -0.41
CDK7-208ENST00000512687 TMEM74BQ9NUR3 256 aa12.51□□□□□ -0.41
CDK7-208ENST00000512687 ELOVL2Q9NXB9 296 aa12.51□□□□□ -0.41
CDK7-208ENST00000512687 XPO7Q9UIA9 1087 aaKnown RBP12.51□□□□□ -0.41
CDK7-208ENST00000512687 CYP8B1Q9UNU6 501 aa12.51□□□□□ -0.41
CDK7-208ENST00000512687 DOCK9Q9BZ29 2069 aa12.5□□□□□ -0.41
CDK7-208ENST00000512687 MED7O43513 233 aa12.5□□□□□ -0.41
CDK7-208ENST00000512687 ACSL4O60488 711 aa12.5□□□□□ -0.41
CDK7-208ENST00000512687 CLCN1P35523 988 aa12.5□□□□□ -0.41
CDK7-208ENST00000512687 ACADSBP45954 432 aa12.5□□□□□ -0.41
CDK7-208ENST00000512687 RING1Q06587 406 aa12.5□□□□□ -0.41
CDK7-208ENST00000512687 KCNMA1Q12791 1236 aa12.5□□□□□ -0.41
CDK7-208ENST00000512687 PDCLQ13371 301 aa12.5□□□□□ -0.41
CDK7-208ENST00000512687 PPM1JQ5JR12 505 aa12.5□□□□□ -0.41
CDK7-208ENST00000512687 PIK3R6Q5UE93 754 aa12.5□□□□□ -0.41
CDK7-208ENST00000512687 NUGGCQ68CJ6 796 aa12.5□□□□□ -0.41
CDK7-208ENST00000512687 SDE2Q6IQ49 451 aa12.5□□□□□ -0.41
CDK7-208ENST00000512687 KIAA1324Q6UXG2 1013 aaKnown RBP12.5□□□□□ -0.41
CDK7-208ENST00000512687 KIAA0907Q7Z7F0 614 aaPredicted RBP12.5□□□□□ -0.41
CDK7-208ENST00000512687 TMEM110Q86TL2 294 aa12.5□□□□□ -0.41
CDK7-208ENST00000512687 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.5□□□□□ -0.41
CDK7-208ENST00000512687 GPT2Q8TD30 523 aa12.5□□□□□ -0.41
CDK7-208ENST00000512687 STK32AQ8WU08 396 aa12.5□□□□□ -0.41
CDK7-208ENST00000512687 PIGKQ92643 395 aa12.5□□□□□ -0.41
CDK7-208ENST00000512687 GOLGA1Q92805 767 aa12.5□□□□□ -0.41
CDK7-208ENST00000512687 TMA16Q96EY4 203 aaKnown RBP12.5□□□□□ -0.41
CDK7-208ENST00000512687 SLC39A13Q96H72 371 aa12.5□□□□□ -0.41
CDK7-208ENST00000512687 CPXM1Q96SM3 734 aa12.5□□□□□ -0.41
CDK7-208ENST00000512687 TUBGCP2Q9BSJ2 902 aa12.5□□□□□ -0.41
CDK7-208ENST00000512687 CIPCQ9C0C6 399 aa12.5□□□□□ -0.41
CDK7-208ENST00000512687 MKRN2Q9H000 416 aaKnown RBP12.5□□□□□ -0.41
CDK7-208ENST00000512687 NUCKS1Q9H1E3 243 aaKnown RBP12.5□□□□□ -0.41
CDK7-208ENST00000512687 NDST4Q9H3R1 872 aa12.5□□□□□ -0.41
CDK7-208ENST00000512687 SAMSN1Q9NSI8 373 aaKnown RBP12.5□□□□□ -0.41
CDK7-208ENST00000512687 ABCB8Q9NUT2 735 aa12.5□□□□□ -0.41
CDK7-208ENST00000512687 DNAJC12Q9UKB3 198 aa12.5□□□□□ -0.41
CDK7-208ENST00000512687 KCNJ18B7U540 433 aa12.49□□□□□ -0.41
CDK7-208ENST00000512687 FOXN3O00409 490 aaPredicted RBP12.49□□□□□ -0.41
CDK7-208ENST00000512687 IRAK2O43187 625 aa12.49□□□□□ -0.41
CDK7-208ENST00000512687 TBL1XO60907 577 aa12.49□□□□□ -0.41
CDK7-208ENST00000512687 IGLV3-25P01717 112 aa12.49□□□□□ -0.41
CDK7-208ENST00000512687 HLA-EP13747 358 aa12.49□□□□□ -0.41
CDK7-208ENST00000512687 ITPKAP23677 461 aa12.49□□□□□ -0.41
CDK7-208ENST00000512687 ERCC5P28715 1186 aaPredicted RBP12.49□□□□□ -0.41
CDK7-208ENST00000512687 CD70P32970 193 aa12.49□□□□□ -0.41
CDK7-208ENST00000512687 COPAP53621 1224 aa12.49□□□□□ -0.41
CDK7-208ENST00000512687 IRX4P78413 519 aa12.49□□□□□ -0.41
CDK7-208ENST00000512687 RPL6Q02878 288 aaKnown RBP12.49□□□□□ -0.41
CDK7-208ENST00000512687 NNTQ13423 1086 aa12.49□□□□□ -0.41
CDK7-208ENST00000512687 KCNJ12Q14500 433 aa12.49□□□□□ -0.41
CDK7-208ENST00000512687 EIF4HQ15056 248 aaKnown RBP12.49□□□□□ -0.41
CDK7-208ENST00000512687 VWA3BQ502W6 1294 aa12.49□□□□□ -0.41
CDK7-208ENST00000512687 PEAR1Q5VY43 1037 aaPredicted RBP12.49□□□□□ -0.41
CDK7-208ENST00000512687 CHST9Q7L1S5 443 aa12.49□□□□□ -0.41
CDK7-208ENST00000512687 ADIPOR2Q86V24 386 aa12.49□□□□□ -0.41
CDK7-208ENST00000512687 SLC47A2Q86VL8 602 aa12.49□□□□□ -0.41
CDK7-208ENST00000512687 SLC41A1Q8IVJ1 513 aa12.49□□□□□ -0.41
CDK7-208ENST00000512687 FAM114A1Q8IWE2 563 aa12.49□□□□□ -0.41
CDK7-208ENST00000512687 ZNF366Q8N895 744 aa12.49□□□□□ -0.41
CDK7-208ENST00000512687 C1orf131Q8NDD1 294 aaKnown RBP12.49□□□□□ -0.41
CDK7-208ENST00000512687 CYB5D2Q8WUJ1 264 aa12.49□□□□□ -0.41
CDK7-208ENST00000512687 UCMAQ8WVF2 138 aa12.49□□□□□ -0.41
CDK7-208ENST00000512687 LMLNQ96KR4 655 aa12.49□□□□□ -0.41
CDK7-208ENST00000512687 FAM81BQ96LP2 452 aa12.49□□□□□ -0.41
CDK7-208ENST00000512687 SERPINB11Q96P15 392 aa12.49□□□□□ -0.41
CDK7-208ENST00000512687 SCUBE2Q9NQ36 999 aa12.49□□□□□ -0.41
CDK7-208ENST00000512687 PLCB1Q9NQ66 1216 aa12.49□□□□□ -0.41
CDK7-208ENST00000512687 FSCN3Q9NQT6 498 aa12.49□□□□□ -0.41
CDK7-208ENST00000512687 GGA2Q9UJY4 613 aa12.49□□□□□ -0.41
CDK7-208ENST00000512687 PCDHGC3Q9UN70 934 aa12.49□□□□□ -0.41
CDK7-208ENST00000512687 TLR6Q9Y2C9 796 aa12.49□□□□□ -0.41
CDK7-208ENST00000512687 FHOD1Q9Y613 1164 aa12.49□□□□□ -0.41
CDK7-208ENST00000512687 PCNX2A6NKB5 2137 aa12.48□□□□□ -0.41
CDK7-208ENST00000512687 CDX4O14627 284 aaPredicted RBP12.48□□□□□ -0.41
CDK7-208ENST00000512687 NPC1O15118 1278 aa12.48□□□□□ -0.41
CDK7-208ENST00000512687 SART1O43290 800 aaKnown RBP12.48□□□□□ -0.41
CDK7-208ENST00000512687 MOCS2O96007 188 aaPredicted RBP12.48□□□□□ -0.41
CDK7-208ENST00000512687 ERBB2P04626 1255 aa12.48□□□□□ -0.41
CDK7-208ENST00000512687 PABPC1P11940 636 aaKnown RBP12.48□□□□□ -0.41
CDK7-208ENST00000512687 SLC11A2P49281 568 aa12.48□□□□□ -0.41
CDK7-208ENST00000512687 ZNF445P59923 1031 aa12.48□□□□□ -0.41
CDK7-208ENST00000512687 RPS24P62847 133 aaKnown RBP12.48□□□□□ -0.41
CDK7-208ENST00000512687 EIF4EBP2Q13542 120 aaPredicted RBP12.48□□□□□ -0.41
CDK7-208ENST00000512687 BYSLQ13895 437 aaKnown RBP12.48□□□□□ -0.41
CDK7-208ENST00000512687 PTPRNQ16849 979 aa12.48□□□□□ -0.41
CDK7-208ENST00000512687 PTPN20Q4JDL3 420 aa12.48□□□□□ -0.41
CDK7-208ENST00000512687 LYSMD4Q5XG99 296 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms