RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 ARHGAP18Q8N392 663 aa13.14□□□□□ -0.31
DDX41-215ENST00000512431 OXR1Q8N573 874 aa13.14□□□□□ -0.31
DDX41-215ENST00000512431 NAF1Q96HR8 494 aaKnown RBP13.14□□□□□ -0.31
DDX41-215ENST00000512431 MARCH2Q9P0N8 246 aa13.14□□□□□ -0.31
DDX41-215ENST00000512431 CGNQ9P2M7 1197 aaKnown RBP13.14□□□□□ -0.31
DDX41-215ENST00000512431 ADAMTS1Q9UHI8 967 aa13.14□□□□□ -0.31
DDX41-215ENST00000512431 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.14□□□□□ -0.31
DDX41-215ENST00000512431 SLC12A8A0AV02 714 aa13.13□□□□□ -0.31
DDX41-215ENST00000512431 RPN1P04843 607 aaKnown RBP13.13□□□□□ -0.31
DDX41-215ENST00000512431 C6P13671 934 aa13.13□□□□□ -0.31
DDX41-215ENST00000512431 EPHA8P29322 1005 aaPredicted RBP13.13□□□□□ -0.31
DDX41-215ENST00000512431 HARS2P49590 506 aaKnown RBP13.13□□□□□ -0.31
DDX41-215ENST00000512431 CASP4P49662 377 aa13.13□□□□□ -0.31
DDX41-215ENST00000512431 GALCP54803 685 aa13.13□□□□□ -0.31
DDX41-215ENST00000512431 ZNF445P59923 1031 aa13.13□□□□□ -0.31
DDX41-215ENST00000512431 E2F1Q01094 437 aa13.13□□□□□ -0.31
DDX41-215ENST00000512431 SHBQ15464 509 aa13.13□□□□□ -0.31
DDX41-215ENST00000512431 KDM7AQ6ZMT4 941 aa13.13□□□□□ -0.31
DDX41-215ENST00000512431 EPM2AIP1Q7L775 607 aaPredicted RBP13.13□□□□□ -0.31
DDX41-215ENST00000512431 FMNL3Q8IVF7 1028 aa13.13□□□□□ -0.31
DDX41-215ENST00000512431 LSMEM2Q8N112 164 aa13.13□□□□□ -0.31
DDX41-215ENST00000512431 PDILTQ8N807 584 aa13.13□□□□□ -0.31
DDX41-215ENST00000512431 TAF4BQ92750 862 aa13.13□□□□□ -0.31
DDX41-215ENST00000512431 ELMO3Q96BJ8 720 aa13.13□□□□□ -0.31
DDX41-215ENST00000512431 PLD4Q96BZ4 506 aa13.13□□□□□ -0.31
DDX41-215ENST00000512431 TMX3Q96JJ7 454 aa13.13□□□□□ -0.31
DDX41-215ENST00000512431 ZNF578Q96N58 590 aaPredicted RBP13.13□□□□□ -0.31
DDX41-215ENST00000512431 ORAI3Q9BRQ5 295 aa13.13□□□□□ -0.31
DDX41-215ENST00000512431 TNMDQ9H2S6 317 aa13.13□□□□□ -0.31
DDX41-215ENST00000512431 FBXL12Q9NXK8 326 aa13.13□□□□□ -0.31
DDX41-215ENST00000512431 UBE4BO95155 1302 aa13.13□□□□□ -0.31
DDX41-215ENST00000512431 SLC28A2O43868 658 aa13.12□□□□□ -0.31
DDX41-215ENST00000512431 WISP1O95388 367 aa13.12□□□□□ -0.31
DDX41-215ENST00000512431 C4BPAP04003 597 aaKnown RBP13.12□□□□□ -0.31
DDX41-215ENST00000512431 DLDP09622 509 aaKnown RBP13.12□□□□□ -0.31
DDX41-215ENST00000512431 POLR2EP19388 210 aaKnown RBP13.12□□□□□ -0.31
DDX41-215ENST00000512431 HLA-FP30511 346 aa13.12□□□□□ -0.31
DDX41-215ENST00000512431 ST8SIA6P61647 398 aa13.12□□□□□ -0.31
DDX41-215ENST00000512431 ASIC1P78348 528 aa13.12□□□□□ -0.31
DDX41-215ENST00000512431 BNIP3Q12983 259 aa13.12□□□□□ -0.31
DDX41-215ENST00000512431 HS1BP3Q53T59 392 aa13.12□□□□□ -0.31
DDX41-215ENST00000512431 FAM26FQ5R3K3 315 aa13.12□□□□□ -0.31
DDX41-215ENST00000512431 NCEH1Q6PIU2 408 aa13.12□□□□□ -0.31
DDX41-215ENST00000512431 DHX40Q8IX18 779 aaKnown RBP13.12□□□□□ -0.31
DDX41-215ENST00000512431 DCBLD1Q8N8Z6 715 aa13.12□□□□□ -0.31
DDX41-215ENST00000512431 OR2T34Q8NGX1 318 aa13.12□□□□□ -0.31
DDX41-215ENST00000512431 RFFLQ8WZ73 363 aa13.12□□□□□ -0.31
DDX41-215ENST00000512431 TMA16Q96EY4 203 aaKnown RBP13.12□□□□□ -0.31
DDX41-215ENST00000512431 OMDQ99983 421 aa13.12□□□□□ -0.31
DDX41-215ENST00000512431 NT5C1AQ9BXI3 368 aa13.12□□□□□ -0.31
DDX41-215ENST00000512431 PABPC3Q9H361 631 aaKnown RBP13.12□□□□□ -0.31
DDX41-215ENST00000512431 CPNE5Q9HCH3 593 aa13.12□□□□□ -0.31
DDX41-215ENST00000512431 ABCB8Q9NUT2 735 aa13.12□□□□□ -0.31
DDX41-215ENST00000512431 HMGXB4Q9UGU5 601 aa13.12□□□□□ -0.31
DDX41-215ENST00000512431 GGA2Q9UJY4 613 aa13.12□□□□□ -0.31
DDX41-215ENST00000512431 TPX2Q9ULW0 747 aaKnown RBP13.12□□□□□ -0.31
DDX41-215ENST00000512431 USP3Q9Y6I4 520 aa13.12□□□□□ -0.31
DDX41-215ENST00000512431 CKAP5Q14008 2032 aa13.12□□□□□ -0.31
DDX41-215ENST00000512431 ZNF462Q96JM2 2506 aa13.11□□□□□ -0.31
DDX41-215ENST00000512431 MYH10P35580 1976 aa13.11□□□□□ -0.31
DDX41-215ENST00000512431 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.11□□□□□ -0.31
DDX41-215ENST00000512431 VPS37CA5D8V6 355 aaPredicted RBP13.11□□□□□ -0.31
DDX41-215ENST00000512431 LRRIQ3A6PVS8 624 aaPredicted RBP13.11□□□□□ -0.31
DDX41-215ENST00000512431 TLR4O00206 839 aa13.11□□□□□ -0.31
DDX41-215ENST00000512431 MT-CO3P00414 261 aa13.11□□□□□ -0.31
DDX41-215ENST00000512431 WNT1P04628 370 aa13.11□□□□□ -0.31
DDX41-215ENST00000512431 PABPC1P11940 636 aaKnown RBP13.11□□□□□ -0.31
DDX41-215ENST00000512431 HOXD9P28356 352 aaPredicted RBP13.11□□□□□ -0.31
DDX41-215ENST00000512431 RXRGP48443 463 aa13.11□□□□□ -0.31
DDX41-215ENST00000512431 INSM1Q01101 510 aaPredicted RBP13.11□□□□□ -0.31
DDX41-215ENST00000512431 CEBPZQ03701 1054 aaKnown RBP13.11□□□□□ -0.31
DDX41-215ENST00000512431 LY6DQ14210 128 aa13.11□□□□□ -0.31
DDX41-215ENST00000512431 RABEP1Q15276 862 aa13.11□□□□□ -0.31
DDX41-215ENST00000512431 MBLAC2Q68D91 279 aa13.11□□□□□ -0.31
DDX41-215ENST00000512431 ADIPOR2Q86V24 386 aa13.11□□□□□ -0.31
DDX41-215ENST00000512431 C12orf56Q8IXR9 622 aa13.11□□□□□ -0.31
DDX41-215ENST00000512431 FAM217AQ8IXS0 508 aa13.11□□□□□ -0.31
DDX41-215ENST00000512431 PARD3BQ8TEW8 1205 aa13.11□□□□□ -0.31
DDX41-215ENST00000512431 SERAC1Q96JX3 654 aa13.11□□□□□ -0.31
DDX41-215ENST00000512431 DUSP16Q9BY84 665 aa13.11□□□□□ -0.31
DDX41-215ENST00000512431 GZF1Q9H116 711 aaPredicted RBP13.11□□□□□ -0.31
DDX41-215ENST00000512431 RSPH9Q9H1X1 276 aaPredicted RBP13.11□□□□□ -0.31
DDX41-215ENST00000512431 ERVMER34-1Q9H9K5 563 aa13.11□□□□□ -0.31
DDX41-215ENST00000512431 TFIP11Q9UBB9 837 aaKnown RBP13.11□□□□□ -0.31
DDX41-215ENST00000512431 A0A087X0B3 334 aa13.1□□□□□ -0.31
DDX41-215ENST00000512431 A0A1W2PP55 124 aa13.1□□□□□ -0.31
DDX41-215ENST00000512431 PYCARD-AS1I3L0S3 204 aa13.1□□□□□ -0.31
DDX41-215ENST00000512431 KLK10O43240 276 aa13.1□□□□□ -0.31
DDX41-215ENST00000512431 MAGEC1O60732 1142 aa13.1□□□□□ -0.31
DDX41-215ENST00000512431 RNASEH2AO75792 299 aaKnown RBP13.1□□□□□ -0.31
DDX41-215ENST00000512431 VNN1O95497 513 aa13.1□□□□□ -0.31
DDX41-215ENST00000512431 ACP1P24666 158 aa13.1□□□□□ -0.31
DDX41-215ENST00000512431 CCR5P51681 352 aa13.1□□□□□ -0.31
DDX41-215ENST00000512431 NXPH1P58417 271 aa13.1□□□□□ -0.31
DDX41-215ENST00000512431 YWHAGP61981 247 aaKnown RBP eCLIP13.1□□□□□ -0.31
DDX41-215ENST00000512431 CLDN10P78369 228 aa13.1□□□□□ -0.31
DDX41-215ENST00000512431 VAC14Q08AM6 782 aa13.1□□□□□ -0.31
DDX41-215ENST00000512431 KMT5BQ4FZB7 885 aa13.1□□□□□ -0.31
DDX41-215ENST00000512431 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.1□□□□□ -0.31
DDX41-215ENST00000512431 ZNF557Q8N988 423 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms