RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 GJA4P35212 333 aa10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 ABCG1P45844 678 aa10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 NSFP46459 744 aaKnown RBP10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 CKAP4Q07065 602 aaKnown RBP10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 PTP4A2Q12974 167 aa10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 HNRNPDQ14103 355 aaKnown RBP10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 DUOXA1Q1HG43 343 aa10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 LYSMD4Q5XG99 296 aa10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 ARHGAP17Q68EM7 881 aa10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 PLEKHA7Q6IQ23 1121 aa10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 CC2D1AQ6P1N0 951 aaPredicted RBP10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 RASSF3Q86WH2 238 aa10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 MAB21L3Q8N8X9 362 aa10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 TMEM35BQ8NCS4 154 aa10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 MNS1Q8NEH6 495 aa10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 SLC35G2Q8TBE7 412 aa10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 STK32AQ8WU08 396 aa10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 ELMO3Q96BJ8 720 aa10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 TMEM176AQ96HP8 235 aa10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 SUSD3Q96L08 255 aa10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 LPIN3Q9BQK8 851 aa10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 NT5C1AQ9BXI3 368 aa10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 THAP2Q9H0W7 228 aa10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 SDCBP2Q9H190 292 aa10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 POLMQ9NP87 494 aaPredicted RBP10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 CYLDQ9NQC7 956 aa10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 PILRBQ9UKJ0 227 aa10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 TTC7AQ9ULT0 858 aaPredicted RBP10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 MAFFQ9ULX9 164 aa10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 APOBEC2Q9Y235 224 aaKnown RBP10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 HYOU1Q9Y4L1 999 aa10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 CEP83Q9Y592 693 aa10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 SCINQ9Y6U3 715 aa10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 HELZP42694 1942 aaKnown RBP10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 PCDH15Q96QU1 1955 aa10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 TCRBV5S1A1TA0A578 114 aa10.96□□□□□ -0.65
PDLIM5-217ENST00000512274 TRABD2BA6NFA1 517 aa10.96□□□□□ -0.65
PDLIM5-217ENST00000512274 KPNA7A9QM74 516 aa10.96□□□□□ -0.65
PDLIM5-217ENST00000512274 DYNC1I1O14576 645 aa10.96□□□□□ -0.65
PDLIM5-217ENST00000512274 GABRDO14764 452 aa10.96□□□□□ -0.65
PDLIM5-217ENST00000512274 PALMO75781 387 aa10.96□□□□□ -0.65
PDLIM5-217ENST00000512274 ATP1A1P05023 1023 aaKnown RBP10.96□□□□□ -0.65
PDLIM5-217ENST00000512274 CALB1P05937 261 aa10.96□□□□□ -0.65
PDLIM5-217ENST00000512274 HNRNPLP14866 589 aaKnown RBP eCLIP10.96□□□□□ -0.65
PDLIM5-217ENST00000512274 WARSP23381 471 aaKnown RBP10.96□□□□□ -0.65
PDLIM5-217ENST00000512274 MAN1A1P33908 653 aa10.96□□□□□ -0.65
PDLIM5-217ENST00000512274 GABRB2P47870 512 aa10.96□□□□□ -0.65
PDLIM5-217ENST00000512274 RPL34P49207 117 aaKnown RBP10.96□□□□□ -0.65
PDLIM5-217ENST00000512274 LILRA4P59901 499 aa10.96□□□□□ -0.65
PDLIM5-217ENST00000512274 PKDCCQ504Y2 493 aa10.96□□□□□ -0.65
PDLIM5-217ENST00000512274 LCLAT1Q6UWP7 414 aa10.96□□□□□ -0.65
PDLIM5-217ENST00000512274 TMEM92Q6UXU6 159 aa10.96□□□□□ -0.65
PDLIM5-217ENST00000512274 CMTM8Q8IZV2 173 aa10.96□□□□□ -0.65
PDLIM5-217ENST00000512274 TMEM86AQ8N2M4 240 aa10.96□□□□□ -0.65
PDLIM5-217ENST00000512274 ATAD1Q8NBU5 361 aa10.96□□□□□ -0.65
PDLIM5-217ENST00000512274 MSANTD4Q8NCY6 345 aa10.96□□□□□ -0.65
PDLIM5-217ENST00000512274 APPL2Q8NEU8 664 aa10.96□□□□□ -0.65
PDLIM5-217ENST00000512274 RIN3Q8TB24 985 aa10.96□□□□□ -0.65
PDLIM5-217ENST00000512274 USP33Q8TEY7 942 aa10.96□□□□□ -0.65
PDLIM5-217ENST00000512274 FNIP1Q8TF40 1166 aa10.96□□□□□ -0.65
PDLIM5-217ENST00000512274 PSMG2Q969U7 264 aa10.96□□□□□ -0.65
PDLIM5-217ENST00000512274 HES6Q96HZ4 224 aa10.96□□□□□ -0.65
PDLIM5-217ENST00000512274 SPACA7Q96KW9 195 aa10.96□□□□□ -0.65
PDLIM5-217ENST00000512274 ZSWIM1Q9BR11 485 aa10.96□□□□□ -0.65
PDLIM5-217ENST00000512274 SMYD3Q9H7B4 428 aa10.96□□□□□ -0.65
PDLIM5-217ENST00000512274 MRPL47Q9HD33 250 aaKnown RBP10.96□□□□□ -0.65
PDLIM5-217ENST00000512274 ACP6Q9NPH0 428 aa10.96□□□□□ -0.65
PDLIM5-217ENST00000512274 BCCIPQ9P287 314 aaKnown RBP eCLIP10.96□□□□□ -0.65
PDLIM5-217ENST00000512274 WDR35Q9P2L0 1181 aa10.96□□□□□ -0.65
PDLIM5-217ENST00000512274 STRIP2Q9ULQ0 834 aa10.96□□□□□ -0.65
PDLIM5-217ENST00000512274 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.96□□□□□ -0.65
PDLIM5-217ENST00000512274 TFR2Q9UP52 801 aa10.96□□□□□ -0.65
PDLIM5-217ENST00000512274 FREM2Q5SZK8 3169 aa10.96□□□□□ -0.66
PDLIM5-217ENST00000512274 GON4LQ3T8J9 2241 aa10.95□□□□□ -0.66
PDLIM5-217ENST00000512274 A0A087WV48 116 aa10.95□□□□□ -0.66
PDLIM5-217ENST00000512274 O00370 1275 aa10.95□□□□□ -0.66
PDLIM5-217ENST00000512274 ARHGAP33O14559 1287 aa10.95□□□□□ -0.66
PDLIM5-217ENST00000512274 THAP12O43422 761 aa10.95□□□□□ -0.66
PDLIM5-217ENST00000512274 TADA3O75528 432 aa10.95□□□□□ -0.66
PDLIM5-217ENST00000512274 FGF19O95750 216 aa10.95□□□□□ -0.66
PDLIM5-217ENST00000512274 TUBBP07437 444 aa10.95□□□□□ -0.66
PDLIM5-217ENST00000512274 SERPINF2P08697 491 aa10.95□□□□□ -0.66
PDLIM5-217ENST00000512274 SCNN1AP37088 669 aa10.95□□□□□ -0.66
PDLIM5-217ENST00000512274 P2RY2P41231 377 aa10.95□□□□□ -0.66
PDLIM5-217ENST00000512274 SLC1A1P43005 524 aa10.95□□□□□ -0.66
PDLIM5-217ENST00000512274 YWHAHQ04917 246 aaPredicted RBP10.95□□□□□ -0.66
PDLIM5-217ENST00000512274 TAF12Q16514 161 aa10.95□□□□□ -0.66
PDLIM5-217ENST00000512274 SOWAHAQ2M3V2 549 aa10.95□□□□□ -0.66
PDLIM5-217ENST00000512274 SGO2Q562F6 1265 aa10.95□□□□□ -0.66
PDLIM5-217ENST00000512274 TAF3Q5VWG9 929 aa10.95□□□□□ -0.66
PDLIM5-217ENST00000512274 RSRC2Q7L4I2 434 aaKnown RBP10.95□□□□□ -0.66
PDLIM5-217ENST00000512274 NT5DC3Q86UY8 548 aa10.95□□□□□ -0.66
PDLIM5-217ENST00000512274 CREG2Q8IUH2 290 aa10.95□□□□□ -0.66
PDLIM5-217ENST00000512274 NAXDQ8IW45 347 aa10.95□□□□□ -0.66
PDLIM5-217ENST00000512274 SCUBE3Q8IX30 993 aa10.95□□□□□ -0.66
PDLIM5-217ENST00000512274 PGBD3Q8N328 593 aa10.95□□□□□ -0.66
PDLIM5-217ENST00000512274 TFAP2BQ92481 460 aa10.95□□□□□ -0.66
PDLIM5-217ENST00000512274 USP13Q92995 863 aaPredicted RBP10.95□□□□□ -0.66
PDLIM5-217ENST00000512274 EXOC4Q96A65 974 aa10.95□□□□□ -0.66
PDLIM5-217ENST00000512274 ARHGEF26Q96DR7 871 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms