RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 TDRD10Q5VZ19 366 aaKnown RBP11.12□□□□□ -0.63
CPNE4-209ENST00000512055 IZUMO2Q6UXV1 221 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 ZPBP2Q6X784 338 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 SHC3Q92529 594 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 FSD1LQ9BXM9 530 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 IL1RL2Q9HB29 575 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 WRAP73Q9P2S5 460 aaPredicted RBP11.12□□□□□ -0.63
CPNE4-209ENST00000512055 APPL1Q9UKG1 709 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 SPEF1Q9Y4P9 236 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 NUP98P52948 1817 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 KLRG2A4D1S0 409 aaPredicted RBP11.11□□□□□ -0.63
CPNE4-209ENST00000512055 RRN3P2A6NIE6 340 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 MSR1P21757 451 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 ADORA2AP29274 412 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 GTF2A2P52657 109 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 TPI1P60174 286 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 ULK3Q6PHR2 472 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 PALB2Q86YC2 1186 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 TMEM176AQ96HP8 235 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 ZNF224Q9NZL3 707 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 TSR3Q9UJK0 312 aaKnown RBP11.11□□□□□ -0.63
CPNE4-209ENST00000512055 ADAM30Q9UKF2 790 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 C5orf58C9J3I9 102 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 DFFAO00273 331 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 ACKR2O00590 384 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 NKRFO15226 690 aaKnown RBP eCLIP11.11□□□□□ -0.63
CPNE4-209ENST00000512055 VDRP11473 427 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 MAPKAPK2P49137 400 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 STARP49675 285 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 C1QBPQ07021 282 aaKnown RBP11.11□□□□□ -0.63
CPNE4-209ENST00000512055 ZNF844Q08AG5 666 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 MPP2Q14168 576 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 FOXR1Q6PIV2 292 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 PRR23CQ6ZRP0 262 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 LRRC34Q8IZ02 419 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 ACTL9Q8TC94 416 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 GTF3C2Q8WUA4 911 aaPredicted RBP11.11□□□□□ -0.63
CPNE4-209ENST00000512055 CLEC4DQ8WXI8 215 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 BSNDQ8WZ55 320 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 PPP2R3CQ969Q6 453 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 KLRG1Q96E93 195 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 EGFL8Q99944 293 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 KDM4CQ9H3R0 1056 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 BAIAP2Q9UQB8 552 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 ARPC4-TTLL3A0A0A6YYG9 625 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 TK2O00142 265 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 NFKBIAP25963 317 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 ADCYAP1R1P41586 468 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 RGS21Q2M5E4 152 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 SPANXN2Q5MJ10 180 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 MFSD7Q6UXD7 560 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 NECAB2Q7Z6G3 386 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 PLEKHH3Q7Z736 793 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 TMEM110Q86TL2 294 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 ZSWIM2Q8NEG5 633 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 SLC7A14Q8TBB6 771 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 SNTG2Q9NY99 539 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 MLXQ9UH92 298 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 SNTNA6NMZ2 147 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 SPATA31C2B4DYI2 1134 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 F8VP50 259 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 MYO1DO94832 1006 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 NCKAP1LP55160 1127 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 CAPSQ13938 189 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 CBFBQ13951 182 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 PERM1Q5SV97 790 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 RIOX2Q8IUF8 465 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 PPIL6Q8IXY8 311 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 WDR36Q8NI36 951 aaKnown RBP11.11□□□□□ -0.63
CPNE4-209ENST00000512055 TRAPPC9Q96Q05 1148 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 UBXN6Q9BZV1 441 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 C12orf4Q9NQ89 552 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 WHRNQ9P202 907 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 POLG2Q9UHN1 485 aa11.11□□□□□ -0.63
CPNE4-209ENST00000512055 LACTBL1A8MY62 500 aa11.1□□□□□ -0.63
CPNE4-209ENST00000512055 ZNF23P17027 643 aa11.1□□□□□ -0.63
CPNE4-209ENST00000512055 ZNF200P98182 395 aaPredicted RBP11.1□□□□□ -0.63
CPNE4-209ENST00000512055 CCNG2Q16589 344 aa11.1□□□□□ -0.63
CPNE4-209ENST00000512055 BTBD8Q5XKL5 378 aa11.1□□□□□ -0.63
CPNE4-209ENST00000512055 RXFP2Q8WXD0 754 aa11.1□□□□□ -0.63
CPNE4-209ENST00000512055 ALG3Q92685 438 aa11.1□□□□□ -0.63
CPNE4-209ENST00000512055 RFT1Q96AA3 541 aa11.1□□□□□ -0.63
CPNE4-209ENST00000512055 KREMEN1Q96MU8 473 aa11.1□□□□□ -0.63
CPNE4-209ENST00000512055 DCLK3Q9C098 648 aa11.1□□□□□ -0.63
CPNE4-209ENST00000512055 ZNF518BQ9C0D4 1074 aa11.1□□□□□ -0.63
CPNE4-209ENST00000512055 AVENQ9NQS1 362 aaPredicted RBP11.1□□□□□ -0.63
CPNE4-209ENST00000512055 SENP1Q9P0U3 644 aa11.1□□□□□ -0.63
CPNE4-209ENST00000512055 ZNF624Q9P2J8 865 aaPredicted RBP11.1□□□□□ -0.63
CPNE4-209ENST00000512055 E2F8A0AVK6 867 aa11.1□□□□□ -0.63
CPNE4-209ENST00000512055 SYNCRIPO60506 623 aaKnown RBP11.1□□□□□ -0.63
CPNE4-209ENST00000512055 EGFRP00533 1210 aa11.1□□□□□ -0.63
CPNE4-209ENST00000512055 TAF6P49848 677 aa11.1□□□□□ -0.63
CPNE4-209ENST00000512055 TUBA1BP68363 451 aa11.1□□□□□ -0.63
CPNE4-209ENST00000512055 GTF2H3Q13889 308 aa11.1□□□□□ -0.63
CPNE4-209ENST00000512055 NCF4Q15080 339 aa11.1□□□□□ -0.63
CPNE4-209ENST00000512055 TUBA1AQ71U36 451 aa11.1□□□□□ -0.63
CPNE4-209ENST00000512055 VN1R5Q7Z5H4 357 aa11.1□□□□□ -0.63
CPNE4-209ENST00000512055 LRRC6Q86X45 466 aa11.1□□□□□ -0.63
CPNE4-209ENST00000512055 ELOVL6Q9H5J4 265 aa11.1□□□□□ -0.63
CPNE4-209ENST00000512055 USP18Q9UMW8 372 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms