RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 BCLAF3A2AJT9 711 aaKnown RBP6.08□□□□□ -1.44
RNF4-217ENST00000511892 WASH3PC4AMC7 463 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 M0QYV0 167 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 GFRA2O00451 464 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 SLC30A4O14863 429 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 MSI1O43347 362 aaKnown RBP6.08□□□□□ -1.44
RNF4-217ENST00000511892 ZNF500O60304 480 aaPredicted RBP6.08□□□□□ -1.44
RNF4-217ENST00000511892 ALDH1A2O94788 518 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 RHOBTB1O94844 696 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 FYNP06241 537 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 ZNF806P0C7X5 589 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 GABRG2P18507 467 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 SLC9A1P19634 815 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 SDHBP21912 280 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 NTSR1P30989 418 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 MPLP40238 635 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 P2RY2P41231 377 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 GPD2P43304 727 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 DGKGP49619 791 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 MFAP3P55082 362 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 CETN1Q12798 172 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 GEN1Q17RS7 908 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 PREPLQ4J6C6 727 aaPredicted RBP6.08□□□□□ -1.44
RNF4-217ENST00000511892 USP39Q53GS9 565 aaKnown RBP6.08□□□□□ -1.44
RNF4-217ENST00000511892 PMS2CLQ68D20 193 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 TMEM215Q68D42 235 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 TCEAL6Q6IPX3 200 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 KIAA1211LQ6NV74 962 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 DPY19L2P1Q6NXN4 242 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 DENND1BQ6P3S1 775 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 GJB7Q6PEY0 223 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 TRIM65Q6PJ69 517 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 DHX40Q8IX18 779 aaKnown RBP6.08□□□□□ -1.44
RNF4-217ENST00000511892 SIX6OS1Q8N1H7 587 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 CPXM2Q8N436 756 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 ENOX1Q8TC92 643 aaKnown RBP6.08□□□□□ -1.44
RNF4-217ENST00000511892 NETO1Q8TDF5 533 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 HMGB4Q8WW32 186 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 TCEAL3Q969E4 200 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 PLD4Q96BZ4 506 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 PIWIL1Q96J94 861 aaKnown RBP6.08□□□□□ -1.44
RNF4-217ENST00000511892 GABRG3Q99928 467 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 RTKNQ9BST9 563 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 CRACR2AQ9BSW2 395 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 TRIM5Q9C035 493 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 DCLK3Q9C098 648 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 LRRC4Q9HBW1 653 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 POLMQ9NP87 494 aaPredicted RBP6.08□□□□□ -1.44
RNF4-217ENST00000511892 ACP6Q9NPH0 428 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 CNGB3Q9NQW8 809 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 IMPACTQ9P2X3 320 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 CYTH4Q9UIA0 394 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 STOML2Q9UJZ1 356 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 AJAP1Q9UKB5 411 aaPredicted RBP6.08□□□□□ -1.44
RNF4-217ENST00000511892 CDV3Q9UKY7 258 aaKnown RBP6.08□□□□□ -1.44
RNF4-217ENST00000511892 STRIP2Q9ULQ0 834 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 SLC27A6Q9Y2P4 619 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 PCDHGA5Q9Y5G8 931 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.08□□□□□ -1.44
RNF4-217ENST00000511892 RAD54BQ9Y620 910 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 CABIN1Q9Y6J0 2220 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 ZFHX4Q86UP3 3567 aa6.08□□□□□ -1.44
RNF4-217ENST00000511892 ZZEF1O43149 2961 aa6.07□□□□□ -1.44
RNF4-217ENST00000511892 PLXNA2O75051 1894 aa6.07□□□□□ -1.44
RNF4-217ENST00000511892 USP24Q9UPU5 2620 aa6.07□□□□□ -1.44
RNF4-217ENST00000511892 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.07□□□□□ -1.44
RNF4-217ENST00000511892 PATE3B3GLJ2 98 aa6.07□□□□□ -1.44
RNF4-217ENST00000511892 TM4SF5O14894 197 aa6.07□□□□□ -1.44
RNF4-217ENST00000511892 WFS1O76024 890 aa6.07□□□□□ -1.44
RNF4-217ENST00000511892 FGFR1OPO95684 399 aaKnown RBP6.07□□□□□ -1.44
RNF4-217ENST00000511892 IGLV3-27P01718 113 aa6.07□□□□□ -1.44
RNF4-217ENST00000511892 LTFP02788 710 aa6.07□□□□□ -1.44
RNF4-217ENST00000511892 KRT5P13647 590 aa6.07□□□□□ -1.44
RNF4-217ENST00000511892 HOXB2P14652 356 aa6.07□□□□□ -1.44
RNF4-217ENST00000511892 HOXD9P28356 352 aaPredicted RBP6.07□□□□□ -1.44
RNF4-217ENST00000511892 GBP1P32455 592 aa6.07□□□□□ -1.44
RNF4-217ENST00000511892 CHKAP35790 457 aa6.07□□□□□ -1.44
RNF4-217ENST00000511892 PTGER3P43115 390 aa6.07□□□□□ -1.44
RNF4-217ENST00000511892 SGSHP51688 502 aa6.07□□□□□ -1.44
RNF4-217ENST00000511892 LIMK1P53667 647 aa6.07□□□□□ -1.44
RNF4-217ENST00000511892 GSDMDP57764 484 aa6.07□□□□□ -1.44
RNF4-217ENST00000511892 CREB5Q02930 508 aa6.07□□□□□ -1.44
RNF4-217ENST00000511892 NCAPHQ15003 741 aa6.07□□□□□ -1.44
RNF4-217ENST00000511892 STILQ15468 1287 aa6.07□□□□□ -1.44
RNF4-217ENST00000511892 ELF2Q15723 593 aa6.07□□□□□ -1.44
RNF4-217ENST00000511892 DPCR1Q3MIW9 517 aa6.07□□□□□ -1.44
RNF4-217ENST00000511892 LCE2AQ5TA79 106 aaPredicted RBP6.07□□□□□ -1.44
RNF4-217ENST00000511892 MSANTD2Q6P1R3 559 aa6.07□□□□□ -1.44
RNF4-217ENST00000511892 TRMT11Q7Z4G4 463 aaKnown RBP6.07□□□□□ -1.44
RNF4-217ENST00000511892 C11orf74Q86VG3 221 aa6.07□□□□□ -1.44
RNF4-217ENST00000511892 CREBRFQ8IUR6 639 aa6.07□□□□□ -1.44
RNF4-217ENST00000511892 TMEFF1Q8IYR6 380 aa6.07□□□□□ -1.44
RNF4-217ENST00000511892 CHPFQ8IZ52 775 aa6.07□□□□□ -1.44
RNF4-217ENST00000511892 PGBD3Q8N328 593 aa6.07□□□□□ -1.44
RNF4-217ENST00000511892 WDTC1Q8N5D0 677 aa6.07□□□□□ -1.44
RNF4-217ENST00000511892 AOPEPQ8N6M6 819 aa6.07□□□□□ -1.44
RNF4-217ENST00000511892 IPO4Q8TEX9 1081 aaKnown RBP6.07□□□□□ -1.44
RNF4-217ENST00000511892 DDI1Q8WTU0 396 aa6.07□□□□□ -1.44
RNF4-217ENST00000511892 RNF139Q8WU17 664 aa6.07□□□□□ -1.44
RNF4-217ENST00000511892 ZNF606Q8WXB4 792 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms