RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 CYBBP04839 570 aa19.88■□□□□ 0.77
HMGCS1-206ENST00000511774 RALAP11233 206 aa19.88■□□□□ 0.77
HMGCS1-206ENST00000511774 PSEN1P49768 467 aa19.88■□□□□ 0.77
HMGCS1-206ENST00000511774 C21orf59P57076 290 aa19.88■□□□□ 0.77
HMGCS1-206ENST00000511774 SNRPFP62306 86 aaKnown RBP19.88■□□□□ 0.77
HMGCS1-206ENST00000511774 CXADRP78310 365 aa19.88■□□□□ 0.77
HMGCS1-206ENST00000511774 ARID5AQ03989 594 aa19.88■□□□□ 0.77
HMGCS1-206ENST00000511774 BNIP3Q12983 259 aa19.88■□□□□ 0.77
HMGCS1-206ENST00000511774 KIAA0907Q7Z7F0 614 aaPredicted RBP19.88■□□□□ 0.77
HMGCS1-206ENST00000511774 NDRG1Q92597 394 aaKnown RBP19.88■□□□□ 0.77
HMGCS1-206ENST00000511774 FGF11Q92914 225 aa19.88■□□□□ 0.77
HMGCS1-206ENST00000511774 ACE2Q9BYF1 805 aaPredicted RBP19.88■□□□□ 0.77
HMGCS1-206ENST00000511774 SGK2Q9HBY8 427 aa19.88■□□□□ 0.77
HMGCS1-206ENST00000511774 SLC39A2Q9NP94 309 aa19.88■□□□□ 0.77
HMGCS1-206ENST00000511774 ABCB8Q9NUT2 735 aa19.88■□□□□ 0.77
HMGCS1-206ENST00000511774 MARCH2Q9P0N8 246 aa19.88■□□□□ 0.77
HMGCS1-206ENST00000511774 MORC2Q9Y6X9 1032 aaPredicted RBP19.88■□□□□ 0.77
HMGCS1-206ENST00000511774 FAM47DPA6NHR8 397 aa19.87■□□□□ 0.77
HMGCS1-206ENST00000511774 DFNA5O60443 496 aa19.87■□□□□ 0.77
HMGCS1-206ENST00000511774 KIF20AO95235 890 aa19.87■□□□□ 0.77
HMGCS1-206ENST00000511774 DNTTP04053 509 aa19.87■□□□□ 0.77
HMGCS1-206ENST00000511774 C1SP09871 688 aa19.87■□□□□ 0.77
HMGCS1-206ENST00000511774 GALCP54803 685 aa19.87■□□□□ 0.77
HMGCS1-206ENST00000511774 ZBTB16Q05516 673 aa19.87■□□□□ 0.77
HMGCS1-206ENST00000511774 SGSM1Q2NKQ1 1148 aa19.87■□□□□ 0.77
HMGCS1-206ENST00000511774 PPP1R26Q5T8A7 1209 aaPredicted RBP19.87■□□□□ 0.77
HMGCS1-206ENST00000511774 NCEH1Q6PIU2 408 aa19.87■□□□□ 0.77
HMGCS1-206ENST00000511774 SV2AQ7L0J3 742 aa19.87■□□□□ 0.77
HMGCS1-206ENST00000511774 BHLHA9Q7RTU4 235 aa19.87■□□□□ 0.77
HMGCS1-206ENST00000511774 KANSL1Q7Z3B3 1105 aa19.87■□□□□ 0.77
HMGCS1-206ENST00000511774 BAP1Q92560 729 aa19.87■□□□□ 0.77
HMGCS1-206ENST00000511774 DHX58Q96C10 678 aa19.87■□□□□ 0.77
HMGCS1-206ENST00000511774 MYO19Q96H55 970 aa19.87■□□□□ 0.77
HMGCS1-206ENST00000511774 TMEM176AQ96HP8 235 aa19.87■□□□□ 0.77
HMGCS1-206ENST00000511774 DUSP16Q9BY84 665 aa19.87■□□□□ 0.77
HMGCS1-206ENST00000511774 DMAC2Q9NW81 257 aa19.87■□□□□ 0.77
HMGCS1-206ENST00000511774 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.87■□□□□ 0.77
HMGCS1-206ENST00000511774 COL12A1Q99715 3063 aa19.87■□□□□ 0.77
HMGCS1-206ENST00000511774 NYNRINQ9P2P1 1898 aaKnown RBP19.86■□□□□ 0.77
HMGCS1-206ENST00000511774 CAPN9O14815 690 aa19.86■□□□□ 0.77
HMGCS1-206ENST00000511774 HLA-DRAP01903 254 aa19.86■□□□□ 0.77
HMGCS1-206ENST00000511774 ITGAVP06756 1048 aa19.86■□□□□ 0.77
HMGCS1-206ENST00000511774 EPHA8P29322 1005 aaPredicted RBP19.86■□□□□ 0.77
HMGCS1-206ENST00000511774 AP3M2P53677 418 aa19.86■□□□□ 0.77
HMGCS1-206ENST00000511774 TRIP4Q15650 581 aaPredicted RBP19.86■□□□□ 0.77
HMGCS1-206ENST00000511774 UNC13DQ70J99 1090 aa19.86■□□□□ 0.77
HMGCS1-206ENST00000511774 TADA2BQ86TJ2 420 aa19.86■□□□□ 0.77
HMGCS1-206ENST00000511774 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.86■□□□□ 0.77
HMGCS1-206ENST00000511774 C7orf25Q9BPX7 421 aa19.86■□□□□ 0.77
HMGCS1-206ENST00000511774 BLZF1Q9H2G9 400 aa19.86■□□□□ 0.77
HMGCS1-206ENST00000511774 PPP4R2Q9NY27 417 aa19.86■□□□□ 0.77
HMGCS1-206ENST00000511774 TFIP11Q9UBB9 837 aaKnown RBP19.86■□□□□ 0.77
HMGCS1-206ENST00000511774 STX6O43752 255 aa19.85■□□□□ 0.77
HMGCS1-206ENST00000511774 P4HA1P13674 534 aa19.85■□□□□ 0.77
HMGCS1-206ENST00000511774 ABCB4P21439 1286 aa19.85■□□□□ 0.77
HMGCS1-206ENST00000511774 CD70P32970 193 aa19.85■□□□□ 0.77
HMGCS1-206ENST00000511774 E2F5Q15329 346 aa19.85■□□□□ 0.77
HMGCS1-206ENST00000511774 KNOP1Q1ED39 458 aaKnown RBP19.85■□□□□ 0.77
HMGCS1-206ENST00000511774 TBC1D25Q3MII6 688 aa19.85■□□□□ 0.77
HMGCS1-206ENST00000511774 MBLAC2Q68D91 279 aa19.85■□□□□ 0.77
HMGCS1-206ENST00000511774 ZNF776Q68DI1 518 aaPredicted RBP19.85■□□□□ 0.77
HMGCS1-206ENST00000511774 FMNL3Q8IVF7 1028 aa19.85■□□□□ 0.77
HMGCS1-206ENST00000511774 WFIKKN2Q8TEU8 576 aa19.85■□□□□ 0.77
HMGCS1-206ENST00000511774 NT5C1AQ9BXI3 368 aa19.85■□□□□ 0.77
HMGCS1-206ENST00000511774 RSPH9Q9H1X1 276 aaPredicted RBP19.85■□□□□ 0.77
HMGCS1-206ENST00000511774 PABPC3Q9H361 631 aaKnown RBP19.85■□□□□ 0.77
HMGCS1-206ENST00000511774 GGA2Q9UJY4 613 aa19.85■□□□□ 0.77
HMGCS1-206ENST00000511774 PLA2G4CQ9UP65 541 aa19.85■□□□□ 0.77
HMGCS1-206ENST00000511774 DLDP09622 509 aaKnown RBP19.84■□□□□ 0.77
HMGCS1-206ENST00000511774 PABPC1P11940 636 aaKnown RBP19.84■□□□□ 0.77
HMGCS1-206ENST00000511774 CD58P19256 250 aa19.84■□□□□ 0.77
HMGCS1-206ENST00000511774 INSM1Q01101 510 aaPredicted RBP19.84■□□□□ 0.77
HMGCS1-206ENST00000511774 KCNH2Q12809 1159 aa19.84■□□□□ 0.77
HMGCS1-206ENST00000511774 TTC31Q49AM3 519 aaPredicted RBP19.84■□□□□ 0.77
HMGCS1-206ENST00000511774 MPPE1Q53F39 396 aa19.84■□□□□ 0.77
HMGCS1-206ENST00000511774 SFMBT2Q5VUG0 894 aa19.84■□□□□ 0.77
HMGCS1-206ENST00000511774 NAF1Q96HR8 494 aaKnown RBP19.84■□□□□ 0.77
HMGCS1-206ENST00000511774 CDK5RAP1Q96SZ6 601 aaKnown RBP19.84■□□□□ 0.77
HMGCS1-206ENST00000511774 NEUROG2Q9H2A3 272 aa19.84■□□□□ 0.77
HMGCS1-206ENST00000511774 FBRSQ9HAH7 460 aa19.84■□□□□ 0.77
HMGCS1-206ENST00000511774 FBXL12Q9NXK8 326 aa19.84■□□□□ 0.77
HMGCS1-206ENST00000511774 CGNQ9P2M7 1197 aaKnown RBP19.84■□□□□ 0.77
HMGCS1-206ENST00000511774 MID1O15344 667 aa19.83■□□□□ 0.77
HMGCS1-206ENST00000511774 RPN1P04843 607 aaKnown RBP19.83■□□□□ 0.77
HMGCS1-206ENST00000511774 CDK4P11802 303 aa19.83■□□□□ 0.77
HMGCS1-206ENST00000511774 CD38P28907 300 aa19.83■□□□□ 0.77
HMGCS1-206ENST00000511774 YWHAGP61981 247 aaKnown RBP eCLIP19.83■□□□□ 0.77
HMGCS1-206ENST00000511774 PDE4CQ08493 712 aa19.83■□□□□ 0.77
HMGCS1-206ENST00000511774 RAB41Q5JT25 222 aa19.83■□□□□ 0.77
HMGCS1-206ENST00000511774 USP30Q70CQ3 517 aa19.83■□□□□ 0.77
HMGCS1-206ENST00000511774 SPATS2Q86XZ4 545 aaKnown RBP19.83■□□□□ 0.77
HMGCS1-206ENST00000511774 DCBLD1Q8N8Z6 715 aa19.83■□□□□ 0.77
HMGCS1-206ENST00000511774 RFFLQ8WZ73 363 aa19.83■□□□□ 0.77
HMGCS1-206ENST00000511774 TAF4BQ92750 862 aa19.83■□□□□ 0.77
HMGCS1-206ENST00000511774 PLD4Q96BZ4 506 aa19.83■□□□□ 0.77
HMGCS1-206ENST00000511774 LMLNQ96KR4 655 aa19.83■□□□□ 0.77
HMGCS1-206ENST00000511774 LRRC27Q9C0I9 530 aa19.83■□□□□ 0.77
HMGCS1-206ENST00000511774 CPNE5Q9HCH3 593 aa19.83■□□□□ 0.77
HMGCS1-206ENST00000511774 AASDHPPTQ9NRN7 309 aa19.83■□□□□ 0.77
HMGCS1-206ENST00000511774 PCDHB1Q9Y5F3 818 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms